RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 LINC00527Q9UJ94 153 aa20.03■□□□□ 0.8
CPNE1-205ENST00000401607 YTHDF2Q9Y5A9 579 aaKnown RBP20.03■□□□□ 0.8
CPNE1-205ENST00000401607 PUS1Q9Y606 427 aaKnown RBP eCLIP20.03■□□□□ 0.8
CPNE1-205ENST00000401607 TRAV30A0A087WSZ9 112 aa20.03■□□□□ 0.8
CPNE1-205ENST00000401607 TMEM250H0YL14 139 aa20.03■□□□□ 0.8
CPNE1-205ENST00000401607 HYPMO75409 117 aa20.03■□□□□ 0.8
CPNE1-205ENST00000401607 IGHV3-23P01764 117 aa20.03■□□□□ 0.8
CPNE1-205ENST00000401607 IGF1P05019 195 aa20.03■□□□□ 0.8
CPNE1-205ENST00000401607 RD3LP0DJH9 198 aa20.03■□□□□ 0.8
CPNE1-205ENST00000401607 KIAA0141Q14154 515 aaPredicted RBP20.03■□□□□ 0.8
CPNE1-205ENST00000401607 OR5AU1Q8NGC0 362 aa20.03■□□□□ 0.8
CPNE1-205ENST00000401607 VN1R17PQ8TDU5 208 aa20.03■□□□□ 0.8
CPNE1-205ENST00000401607 TOMM40O96008 361 aa20.02■□□□□ 0.8
CPNE1-205ENST00000401607 RHOGP84095 191 aa20.02■□□□□ 0.8
CPNE1-205ENST00000401607 Q56UQ5 140 aa20.02■□□□□ 0.8
CPNE1-205ENST00000401607 AWAT1Q58HT5 328 aa20.02■□□□□ 0.8
CPNE1-205ENST00000401607 CST9LP1Q5W188 147 aa20.02■□□□□ 0.8
CPNE1-205ENST00000401607 Q6ZS46 218 aa20.02■□□□□ 0.8
CPNE1-205ENST00000401607 SUN5Q8TC36 379 aa20.02■□□□□ 0.8
CPNE1-205ENST00000401607 TMEM167BQ9NRX6 74 aa20.02■□□□□ 0.8
CPNE1-205ENST00000401607 FAM74A7A6NL05 159 aa20.01■□□□□ 0.79
CPNE1-205ENST00000401607 H3BQ15 152 aa20.01■□□□□ 0.79
CPNE1-205ENST00000401607 DNASE2O00115 360 aaPredicted RBP20.01■□□□□ 0.79
CPNE1-205ENST00000401607 FABP1P07148 127 aa20.01■□□□□ 0.79
CPNE1-205ENST00000401607 FCGR2BP31994 310 aaPredicted RBP20.01■□□□□ 0.79
CPNE1-205ENST00000401607 LYZP61626 148 aa20.01■□□□□ 0.79
CPNE1-205ENST00000401607 FAM74A3Q4VXF1 159 aa20.01■□□□□ 0.79
CPNE1-205ENST00000401607 C20orf24Q9BUV8 137 aa20.01■□□□□ 0.79
CPNE1-205ENST00000401607 CSPG4Q6UVK1 2322 aa20.01■□□□□ 0.79
CPNE1-205ENST00000401607 ZANQ9Y493 2812 aa20.01■□□□□ 0.79
CPNE1-205ENST00000401607 C15orf32Q32M92 178 aa20■□□□□ 0.79
CPNE1-205ENST00000401607 OR10J4P0C629 311 aa20■□□□□ 0.79
CPNE1-205ENST00000401607 YPEL3P61236 119 aaPredicted RBP20■□□□□ 0.79
CPNE1-205ENST00000401607 Q6YL49 198 aa20■□□□□ 0.79
CPNE1-205ENST00000401607 OR51G1Q8NGK1 321 aa20■□□□□ 0.79
CPNE1-205ENST00000401607 TXN2Q99757 166 aa20■□□□□ 0.79
CPNE1-205ENST00000401607 M0R036 132 aa19.99■□□□□ 0.79
CPNE1-205ENST00000401607 NPPCP23582 126 aa19.99■□□□□ 0.79
CPNE1-205ENST00000401607 NECAP1Q8NC96 275 aa19.99■□□□□ 0.79
CPNE1-205ENST00000401607 OR5R1Q8NH85 324 aa19.99■□□□□ 0.79
CPNE1-205ENST00000401607 ZNF502Q8TBZ5 544 aa19.99■□□□□ 0.79
CPNE1-205ENST00000401607 MS4A10Q96PG2 267 aa19.99■□□□□ 0.79
CPNE1-205ENST00000401607 TXNDC17Q9BRA2 123 aa19.99■□□□□ 0.79
CPNE1-205ENST00000401607 NIPSNAP3BQ9BS92 247 aa19.99■□□□□ 0.79
CPNE1-205ENST00000401607 ZNF491Q8N8L2 437 aa19.98■□□□□ 0.79
CPNE1-205ENST00000401607 MRPL27Q9P0M9 148 aaKnown RBP19.98■□□□□ 0.79
CPNE1-205ENST00000401607 HIGD1AQ9Y241 93 aa19.98■□□□□ 0.79
CPNE1-205ENST00000401607 ARL2-SNX15V9GYD0 113 aa19.98■□□□□ 0.79
CPNE1-205ENST00000401607 OR2T8A6NH00 312 aa19.98■□□□□ 0.79
CPNE1-205ENST00000401607 PDE6DO43924 150 aa19.98■□□□□ 0.79
CPNE1-205ENST00000401607 PYYP10082 97 aa19.98■□□□□ 0.79
CPNE1-205ENST00000401607 NOL4LQ96MY1 436 aaPredicted RBP19.98■□□□□ 0.79
CPNE1-205ENST00000401607 ZNF469Q96JG9 3925 aaPredicted RBP19.97■□□□□ 0.79
CPNE1-205ENST00000401607 GCN1Q92616 2671 aaKnown RBP19.97■□□□□ 0.79
CPNE1-205ENST00000401607 WI2-2373I1.2A0A1W2PRP0 233 aa19.97■□□□□ 0.79
CPNE1-205ENST00000401607 CTSGP08311 255 aa19.97■□□□□ 0.79
CPNE1-205ENST00000401607 UBE2L3P68036 154 aaKnown RBP19.97■□□□□ 0.79
CPNE1-205ENST00000401607 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.97■□□□□ 0.79
CPNE1-205ENST00000401607 RPUSD4Q96CM3 377 aaKnown RBP19.97■□□□□ 0.79
CPNE1-205ENST00000401607 PAXXQ9BUH6 204 aa19.97■□□□□ 0.79
CPNE1-205ENST00000401607 PARLQ9H300 379 aa19.97■□□□□ 0.79
CPNE1-205ENST00000401607 OR51M1Q9H341 326 aa19.97■□□□□ 0.79
CPNE1-205ENST00000401607 PRDM13Q9H4Q3 707 aa19.97■□□□□ 0.79
CPNE1-205ENST00000401607 CREBBPQ92793 2442 aa19.96■□□□□ 0.79
CPNE1-205ENST00000401607 C7orf77A4D0Y5 90 aa19.96■□□□□ 0.79
CPNE1-205ENST00000401607 ZNF727A8MUV8 499 aa19.96■□□□□ 0.79
CPNE1-205ENST00000401607 PPIFP30405 207 aaKnown RBP19.96■□□□□ 0.79
CPNE1-205ENST00000401607 TMEM88Q6PEY1 159 aa19.96■□□□□ 0.79
CPNE1-205ENST00000401607 RNF125Q96EQ8 232 aa19.96■□□□□ 0.79
CPNE1-205ENST00000401607 TVP23CQ96ET8 276 aa19.96■□□□□ 0.79
CPNE1-205ENST00000401607 F6UZH7 168 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 NUPL2O15504 423 aaKnown RBP19.95■□□□□ 0.78
CPNE1-205ENST00000401607 ADMP35318 185 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 AKR1C3P42330 323 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 KRTAP1-1Q07627 177 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 CBLN2Q8IUK8 224 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 FXYD5Q96DB9 178 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 CHRDL1Q9BU40 450 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 VPREB3Q9UKI3 123 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 OR2C1O95371 312 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 IL4P05112 153 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 ZNF674Q2M3X9 581 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 CCDC140Q96MF4 163 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 SMIM7Q9BQ49 75 aa19.95■□□□□ 0.78
CPNE1-205ENST00000401607 SLC25A39Q9BZJ4 359 aaPredicted RBP19.95■□□□□ 0.78
CPNE1-205ENST00000401607 AP4M1O00189 453 aa19.94■□□□□ 0.78
CPNE1-205ENST00000401607 RHEBQ15382 184 aa19.94■□□□□ 0.78
CPNE1-205ENST00000401607 LEMD1Q68G75 181 aa19.94■□□□□ 0.78
CPNE1-205ENST00000401607 Q8WTZ3 238 aa19.94■□□□□ 0.78
CPNE1-205ENST00000401607 ZNF414Q96IQ9 312 aa19.94■□□□□ 0.78
CPNE1-205ENST00000401607 RPS10P5Q9NQ39 176 aa19.94■□□□□ 0.78
CPNE1-205ENST00000401607 GPR183P32249 361 aa19.93■□□□□ 0.78
CPNE1-205ENST00000401607 IL17RELQ6ZVW7 336 aa19.93■□□□□ 0.78
CPNE1-205ENST00000401607 SDF2L1Q9HCN8 221 aa19.93■□□□□ 0.78
CPNE1-205ENST00000401607 ITPR3Q14573 2671 aa19.93■□□□□ 0.78
CPNE1-205ENST00000401607 SCO2A0A1W2PP80 73 aa19.93■□□□□ 0.78
CPNE1-205ENST00000401607 USF2Q15853 346 aaPredicted RBP19.93■□□□□ 0.78
CPNE1-205ENST00000401607 STXBP6Q8NFX7 210 aa19.93■□□□□ 0.78
CPNE1-205ENST00000401607 EEF1AKMT3Q96AZ1 226 aa19.93■□□□□ 0.78
CPNE1-205ENST00000401607 A0A1W2PRE2 83 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms