RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 PPP5D1E7EU14 171 aa7□□□□□ -1.29
VPS53-203ENST00000401468 LGALS9O00182 355 aa7□□□□□ -1.29
VPS53-203ENST00000401468 GGCTO75223 188 aaKnown RBP7□□□□□ -1.29
VPS53-203ENST00000401468 CST7O76096 145 aa7□□□□□ -1.29
VPS53-203ENST00000401468 IGHV3-48P01763 117 aa7□□□□□ -1.29
VPS53-203ENST00000401468 IGHV3-23P01764 117 aa7□□□□□ -1.29
VPS53-203ENST00000401468 ZP3P21754 424 aa7□□□□□ -1.29
VPS53-203ENST00000401468 RPL12P30050 165 aaKnown RBP7□□□□□ -1.29
VPS53-203ENST00000401468 GPR183P32249 361 aa7□□□□□ -1.29
VPS53-203ENST00000401468 ARL3P36405 182 aa7□□□□□ -1.29
VPS53-203ENST00000401468 RND2P52198 227 aa7□□□□□ -1.29
VPS53-203ENST00000401468 LINC00310P59036 64 aa7□□□□□ -1.29
VPS53-203ENST00000401468 HBG1P69891 147 aa7□□□□□ -1.29
VPS53-203ENST00000401468 HBG2P69892 147 aa7□□□□□ -1.29
VPS53-203ENST00000401468 NHLH2Q02577 135 aa7□□□□□ -1.29
VPS53-203ENST00000401468 SLC38A11Q08AI6 406 aa7□□□□□ -1.29
VPS53-203ENST00000401468 ATP6V1FQ16864 119 aa7□□□□□ -1.29
VPS53-203ENST00000401468 OR8G2PQ6IF36 304 aa7□□□□□ -1.29
VPS53-203ENST00000401468 ACSM6Q6P461 480 aa7□□□□□ -1.29
VPS53-203ENST00000401468 STX12Q86Y82 276 aa7□□□□□ -1.29
VPS53-203ENST00000401468 OR11H4Q8NGC9 324 aa7□□□□□ -1.29
VPS53-203ENST00000401468 OR1S2Q8NGQ3 325 aa7□□□□□ -1.29
VPS53-203ENST00000401468 DCUN1D4Q92564 292 aa7□□□□□ -1.29
VPS53-203ENST00000401468 TRGV9Q99603 122 aa7□□□□□ -1.29
VPS53-203ENST00000401468 S4R3C0 116 aa7□□□□□ -1.29
VPS53-203ENST00000401468 hCG_2014768A0A024R1R8 64 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 ANKRD34BA5PLL1 514 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 KRTAP9-7A8MTY7 169 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 NDUFA4O00483 81 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 GNG7O60262 68 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 C1QBP02746 253 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 OR10J1P30954 320 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 SLURP1P55000 103 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 ZNF345Q14585 488 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 Q56UQ5 140 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 AKAP14Q86UN6 197 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 NPIPB3Q92617 1050 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 SLC35E1Q96K37 410 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 TMEM147Q9BVK8 224 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 PARD6GQ9BYG4 376 aaPredicted RBP6.99□□□□□ -1.29
VPS53-203ENST00000401468 NPVFQ9HCQ7 196 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 SIGLEC8Q9NYZ4 499 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 WDR83OSQ9Y284 106 aa6.99□□□□□ -1.29
VPS53-203ENST00000401468 SEC14L6B5MCN3 397 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 SMLR1H3BR10 107 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 NUPL2O15504 423 aaKnown RBP6.98□□□□□ -1.29
VPS53-203ENST00000401468 OR2C1O95371 312 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 TOMM40O96008 361 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 ELLP55199 621 aaPredicted RBP6.98□□□□□ -1.29
VPS53-203ENST00000401468 RELQ04864 619 aaPredicted RBP6.98□□□□□ -1.29
VPS53-203ENST00000401468 EGFEM1PQ0D2K5 195 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 IL34Q6ZMJ4 242 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 ZNF600Q6ZNG1 722 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 ZNF546Q86UE3 836 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 OR5C1Q8NGR4 320 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 TMEM190Q8WZ59 177 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 DPF1Q92782 380 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 DLX4Q92988 240 aaPredicted RBP6.98□□□□□ -1.29
VPS53-203ENST00000401468 ACY3Q96HD9 319 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 UQCC1Q9NVA1 299 aa6.98□□□□□ -1.29
VPS53-203ENST00000401468 K7EMT4 169 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 MPDU1O75352 247 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 SCGB2A1O75556 95 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 C8orf88P0DMB2 117 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 PLP1P60201 277 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 CD300CQ08708 224 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 RPEL1Q2QD12 228 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 TIGITQ495A1 244 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 TEPPQ6URK8 271 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 UNQ9165/PRO28630Q6UXU0 137 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 TMEM217Q8N7C4 229 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 UBAC2Q8NBM4 344 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 ATP5SQ99766 215 aa6.97□□□□□ -1.29
VPS53-203ENST00000401468 PAIP2BQ9ULR5 123 aaKnown RBP6.97□□□□□ -1.29
VPS53-203ENST00000401468 HYDINQ4G0P3 5121 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 FXYD6-FXYD2A0A087WZ82 144 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 TMEM213A2RRL7 107 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 CFDP00746 253 aaPredicted RBP6.96□□□□□ -1.3
VPS53-203ENST00000401468 PSG1P11464 419 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 SELENOTP62341 195 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 ZNF90Q03938 601 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 AKR1C1Q04828 323 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 OR2F1Q13607 317 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 FAM106AQ4KMX7 169 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 TOMM20LQ6UXN7 152 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 LILRB2Q8N423 598 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 KCNRGQ8N5I3 272 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 INO80EQ8NBZ0 244 aaPredicted RBP6.96□□□□□ -1.3
VPS53-203ENST00000401468 OR9G4Q8NGQ1 327 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 MGST2Q99735 147 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 WDR61Q9GZS3 305 aaKnown RBP6.96□□□□□ -1.3
VPS53-203ENST00000401468 WFDC1Q9HC57 220 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 FBXL17Q9UF56 701 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 SLC45A2Q9UMX9 530 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 SELENOKQ9Y6D0 94 aa6.96□□□□□ -1.3
VPS53-203ENST00000401468 ZFP92A6NM28 416 aa6.95□□□□□ -1.3
VPS53-203ENST00000401468 OVOL1O14753 267 aa6.95□□□□□ -1.3
VPS53-203ENST00000401468 TAAR5O14804 337 aa6.95□□□□□ -1.3
VPS53-203ENST00000401468 ARPC5O15511 151 aa6.95□□□□□ -1.3
VPS53-203ENST00000401468 DFFBO76075 338 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms