RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 Q9H3A6 140 aa11.7□□□□□ -0.54
GABPA-202ENST00000400075 AP5S1Q9NUS5 200 aa11.7□□□□□ -0.54
GABPA-202ENST00000400075 PLXNA2O75051 1894 aa11.7□□□□□ -0.54
GABPA-202ENST00000400075 C9orf62Q8N4C0 152 aa11.7□□□□□ -0.54
GABPA-202ENST00000400075 KIR3DL3Q8N743 410 aa11.7□□□□□ -0.54
GABPA-202ENST00000400075 WFDC12Q8WWY7 111 aa11.7□□□□□ -0.54
GABPA-202ENST00000400075 ZNF324O75467 553 aaPredicted RBP11.69□□□□□ -0.54
GABPA-202ENST00000400075 ACTL10Q5JWF8 245 aa11.69□□□□□ -0.54
GABPA-202ENST00000400075 ZNF524Q96C55 264 aa11.69□□□□□ -0.54
GABPA-202ENST00000400075 TMEM218A2RU14 115 aa11.69□□□□□ -0.54
GABPA-202ENST00000400075 LMO1P25800 156 aa11.69□□□□□ -0.54
GABPA-202ENST00000400075 MIR17HGQ75NE6 70 aa11.69□□□□□ -0.54
GABPA-202ENST00000400075 ASCL2Q99929 193 aa11.69□□□□□ -0.54
GABPA-202ENST00000400075 TRAV21A0A0B4J279 112 aa11.69□□□□□ -0.54
GABPA-202ENST00000400075 C22orf46C9J442 243 aa11.69□□□□□ -0.54
GABPA-202ENST00000400075 DKK1O94907 266 aa11.69□□□□□ -0.54
GABPA-202ENST00000400075 NDPQ00604 133 aa11.69□□□□□ -0.54
GABPA-202ENST00000400075 FREM1Q5H8C1 2179 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 FABP5P3A8MUU1 101 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 IGHV4-59P01825 116 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 PSG1P11464 419 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 BIVMQ86UB2 503 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 OR11H1Q8NG94 326 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 RCC1LQ96I51 464 aaKnown RBP11.68□□□□□ -0.54
GABPA-202ENST00000400075 ITGB1BP1O14713 200 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 OR8A1Q8NGG7 326 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 MAP1LC3AQ9H492 121 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 GEMIN7Q9H840 131 aaKnown RBP11.68□□□□□ -0.54
GABPA-202ENST00000400075 PEX7O00628 323 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 SCGB1C2P0DMR2 95 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 RPL15P61313 204 aaKnown RBP11.68□□□□□ -0.54
GABPA-202ENST00000400075 TMEM97Q5BJF2 176 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 FAM120AOSQ5T036 256 aa11.68□□□□□ -0.54
GABPA-202ENST00000400075 DUX4L9Q6RFH8 374 aaPredicted RBP11.68□□□□□ -0.54
GABPA-202ENST00000400075 USP9XQ93008 2570 aaPredicted RBP11.68□□□□□ -0.54
GABPA-202ENST00000400075 NUDT3O95989 172 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 ZNRD1Q9P1U0 126 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 TRBV20OR9-2A0A075B6H5 130 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 C7orf77A4D0Y5 90 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 G3V318 75 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 FGF16O43320 207 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 FHL1Q13642 323 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 TMEM191AQ9H0A3 160 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 NCOR1P1Q9H4R4 102 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 IGHV2-70P01814 119 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 IGKV1-16P04430 117 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 ELANEP08246 267 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 RNF144BQ7Z419 303 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 CIARTQ8N365 385 aaPredicted RBP11.67□□□□□ -0.54
GABPA-202ENST00000400075 ZNF502Q8TBZ5 544 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 OTORQ9NRC9 128 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 GRIFINA4D1Z8 144 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 RPL29P47914 159 aaKnown RBP11.67□□□□□ -0.54
GABPA-202ENST00000400075 FBLN7Q53RD9 439 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 CLRN3Q8NCR9 226 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 UBE2E2Q96LR5 201 aa11.67□□□□□ -0.54
GABPA-202ENST00000400075 LINC00473A8K010 186 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 CXCL2P19875 107 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 SEM1Q6ZVN7 128 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 CENPWQ5EE01 88 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 MAP1LC3CQ9BXW4 147 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 ZMAT4Q9H898 229 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 PPP1R17O96001 155 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 ZNF415Q09FC8 603 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 C9orf139Q6ZV77 190 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 PRR14LQ5THK1 2151 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 ID3Q02535 119 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 ASCL4Q6XD76 172 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 VGLL1Q99990 258 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 SRSF8Q9BRL6 282 aaKnown RBP11.66□□□□□ -0.54
GABPA-202ENST00000400075 KLK15Q9H2R5 256 aa11.66□□□□□ -0.54
GABPA-202ENST00000400075 M0R3E3 92 aa11.65□□□□□ -0.54
GABPA-202ENST00000400075 FCN3O75636 299 aa11.65□□□□□ -0.54
GABPA-202ENST00000400075 MT-ND6P03923 174 aa11.65□□□□□ -0.54
GABPA-202ENST00000400075 SUMO2P61956 95 aaKnown RBP11.65□□□□□ -0.54
GABPA-202ENST00000400075 C5orf24Q7Z6I8 188 aa11.65□□□□□ -0.54
GABPA-202ENST00000400075 GFI1Q99684 422 aa11.65□□□□□ -0.54
GABPA-202ENST00000400075 TRAV3A0A0B4J244 114 aa11.65□□□□□ -0.54
GABPA-202ENST00000400075 DEFB131AP59861 70 aa11.65□□□□□ -0.54
GABPA-202ENST00000400075 FLNBO75369 2602 aaKnown RBP11.65□□□□□ -0.54
GABPA-202ENST00000400075 PRRC2AP48634 2157 aaKnown RBP11.65□□□□□ -0.54
GABPA-202ENST00000400075 TOMM20LQ6UXN7 152 aa11.65□□□□□ -0.54
GABPA-202ENST00000400075 HSPB8Q9UJY1 196 aa11.65□□□□□ -0.54
GABPA-202ENST00000400075 GCSHP23434 173 aa11.65□□□□□ -0.55
GABPA-202ENST00000400075 CCKARP32238 428 aa11.65□□□□□ -0.55
GABPA-202ENST00000400075 RPL13AP40429 203 aaKnown RBP11.65□□□□□ -0.55
GABPA-202ENST00000400075 USP9YO00507 2555 aaPredicted RBP11.64□□□□□ -0.55
GABPA-202ENST00000400075 MPTX1A8MV57 137 aa11.64□□□□□ -0.55
GABPA-202ENST00000400075 REC114Q7Z4M0 266 aa11.64□□□□□ -0.55
GABPA-202ENST00000400075 WDR86Q86TI4 376 aa11.64□□□□□ -0.55
GABPA-202ENST00000400075 A0A087WX48 190 aa11.64□□□□□ -0.55
GABPA-202ENST00000400075 OR9G4Q8NGQ1 327 aa11.64□□□□□ -0.55
GABPA-202ENST00000400075 ISOC2Q96AB3 205 aa11.64□□□□□ -0.55
GABPA-202ENST00000400075 CRPP02741 224 aa11.64□□□□□ -0.55
GABPA-202ENST00000400075 LINC00205P59089 165 aa11.64□□□□□ -0.55
GABPA-202ENST00000400075 ELOBQ15370 118 aa11.64□□□□□ -0.55
GABPA-202ENST00000400075 LDLRAD4O15165 306 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 RNF138Q8WVD3 245 aa11.63□□□□□ -0.55
GABPA-202ENST00000400075 TSSC4Q9Y5U2 329 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 409.7 ms