RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 PRB1P04280 392 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 ORMDL2Q53FV1 153 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 RHPN1-AS1Q9BWJ2 59 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 XIRP1Q702N8 1843 aaKnown RBP9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 LINC00587B1AMM8 73 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 ZNF876PQ49A33 203 aa9.92□□□□□ -0.82
CACNA1C-213ENST00000399629 DPRXA6NFQ7 191 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 RPL32P62910 135 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 C9orf139Q6ZV77 190 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 PAQR4Q8N4S7 273 aaPredicted RBP9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 RCC1LQ96I51 464 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 HIGD1CA8MV81 97 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 IGHG3P01860 377 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 FOXG1P55316 489 aaPredicted RBP9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 SRSF4Q08170 494 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 C6orf226Q5I0X4 101 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 PAX4O43316 350 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 AMBPP02760 352 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 CD177Q8N6Q3 437 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 GATD1Q8NB37 220 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 NINQ8N4C6 2090 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 FAM90A9PA6NNJ1 464 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 ZNF474Q6S9Z5 364 aaPredicted RBP9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 SCN5AQ14524 2016 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 LINC00114Q6XXX2 140 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 PPP1R3EQ9H7J1 279 aa9.91□□□□□ -0.82
CACNA1C-213ENST00000399629 LINC00477Q96M19 166 aa9.9□□□□□ -0.82
CACNA1C-213ENST00000399629 SLC25A2Q9BXI2 301 aa9.9□□□□□ -0.82
CACNA1C-213ENST00000399629 SLC25A39Q9BZJ4 359 aaPredicted RBP9.9□□□□□ -0.82
CACNA1C-213ENST00000399629 DAZ1Q9NQZ3 744 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-213ENST00000399629 RALGAPA2Q2PPJ7 1873 aa9.9□□□□□ -0.82
CACNA1C-213ENST00000399629 TOMM40O96008 361 aa9.9□□□□□ -0.82
CACNA1C-213ENST00000399629 SBF1O95248 1867 aa9.9□□□□□ -0.82
CACNA1C-213ENST00000399629 UBE2E1P51965 193 aa9.9□□□□□ -0.82
CACNA1C-213ENST00000399629 MST1LQ2TV78 715 aa9.9□□□□□ -0.82
CACNA1C-213ENST00000399629 NPIPB5A8MRT5 1133 aa9.9□□□□□ -0.83
CACNA1C-213ENST00000399629 GGTLC3B5MD39 225 aa9.9□□□□□ -0.83
CACNA1C-213ENST00000399629 RASL10AQ92737 203 aa9.9□□□□□ -0.83
CACNA1C-213ENST00000399629 ARID2Q68CP9 1835 aa9.9□□□□□ -0.83
CACNA1C-213ENST00000399629 COQ2Q96H96 371 aa9.89□□□□□ -0.83
CACNA1C-213ENST00000399629 XCL2Q9UBD3 114 aa9.89□□□□□ -0.83
CACNA1C-213ENST00000399629 C22orf46C9J442 243 aa9.89□□□□□ -0.83
CACNA1C-213ENST00000399629 NPC2P61916 151 aa9.89□□□□□ -0.83
CACNA1C-213ENST00000399629 A0A1B0GTI1 187 aa9.89□□□□□ -0.83
CACNA1C-213ENST00000399629 OVOL3O00110 214 aa9.89□□□□□ -0.83
CACNA1C-213ENST00000399629 C10orf55Q5SWW7 151 aa9.89□□□□□ -0.83
CACNA1C-213ENST00000399629 DOCK3Q8IZD9 2030 aa9.89□□□□□ -0.83
CACNA1C-213ENST00000399629 IGHV2-70DA0A0C4DH43 119 aa9.89□□□□□ -0.83
CACNA1C-213ENST00000399629 DEFB104AQ8WTQ1 72 aa9.89□□□□□ -0.83
CACNA1C-213ENST00000399629 A0A1B0GWJ7 208 aa9.89□□□□□ -0.83
CACNA1C-213ENST00000399629 IGKV1D-13A0A0B4J2D9 117 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 PMS2P5A8MQ11 134 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 H0YJW9 148 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 STAG3L3P0CL85 134 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 IGKV1-13P0DP09 117 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 PLNP26678 52 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 ZNF138P52744 262 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 TEX43Q6ZNM6 134 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 TMEM249Q2WGJ8 235 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 KLF17Q5JT82 389 aaPredicted RBP9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 C18orf12Q96KH6 178 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 RTBDNQ9BSG5 229 aaPredicted RBP9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 SCRT1Q9BWW7 348 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 CSRP3P50461 194 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 LAMTOR3Q9UHA4 124 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 CLPSP04118 112 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 DEFB113Q30KQ7 82 aa9.88□□□□□ -0.83
CACNA1C-213ENST00000399629 PRTN3P24158 256 aa9.87□□□□□ -0.83
CACNA1C-213ENST00000399629 C1orf159Q96HA4 380 aa9.87□□□□□ -0.83
CACNA1C-213ENST00000399629 NKAPP1Q8N9T2 125 aa9.87□□□□□ -0.83
CACNA1C-213ENST00000399629 KNL1Q8NG31 2342 aa9.87□□□□□ -0.83
CACNA1C-213ENST00000399629 HOXD3P31249 432 aaPredicted RBP9.87□□□□□ -0.83
CACNA1C-213ENST00000399629 TRAF4Q9BUZ4 470 aaPredicted RBP9.87□□□□□ -0.83
CACNA1C-213ENST00000399629 RNASE7Q9H1E1 156 aaKnown RBP9.87□□□□□ -0.83
CACNA1C-213ENST00000399629 A0A1B0GV72 72 aa9.87□□□□□ -0.83
CACNA1C-213ENST00000399629 SNAI2O43623 268 aa9.87□□□□□ -0.83
CACNA1C-213ENST00000399629 KNTC1P50748 2209 aa9.87□□□□□ -0.83
CACNA1C-213ENST00000399629 SMIM6P0DI80 62 aa9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 CD200R1LQ6Q8B3 271 aa9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 DKK4Q9UBT3 224 aa9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 LSM4Q9Y4Z0 139 aaKnown RBP9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 DPM2O94777 84 aa9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 CD55P08174 381 aa9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 CCL1P22362 96 aa9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 LMO1P25800 156 aa9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 TSSC4Q9Y5U2 329 aaPredicted RBP9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 TRAV5A0A0B4J249 113 aa9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 SUPT4H1P63272 117 aaKnown RBP9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 TCF15Q12870 199 aa9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 TCF20Q9UGU0 1960 aaKnown RBP9.86□□□□□ -0.83
CACNA1C-213ENST00000399629 LDLRAD4O15165 306 aa9.85□□□□□ -0.83
CACNA1C-213ENST00000399629 EFNA2O43921 213 aa9.85□□□□□ -0.83
CACNA1C-213ENST00000399629 PPBPP02775 128 aa9.85□□□□□ -0.83
CACNA1C-213ENST00000399629 DMRTA1Q5VZB9 504 aa9.85□□□□□ -0.83
CACNA1C-213ENST00000399629 IMMP2LQ96T52 175 aa9.85□□□□□ -0.83
CACNA1C-213ENST00000399629 LAGE3Q14657 143 aa9.85□□□□□ -0.83
CACNA1C-213ENST00000399629 ST6GALNAC6Q969X2 333 aa9.85□□□□□ -0.83
CACNA1C-213ENST00000399629 SIGLEC9Q9Y336 463 aa9.85□□□□□ -0.83
CACNA1C-213ENST00000399629 ZNF250P15622 560 aa9.85□□□□□ -0.83
CACNA1C-213ENST00000399629 IGFBP3P17936 291 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms