RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 SLC38A11Q08AI6 406 aa13.35□□□□□ -0.27
CTNS-203ENST00000399306 VWC2Q2TAL6 325 aa13.35□□□□□ -0.27
CTNS-203ENST00000399306 CD300EQ496F6 205 aaPredicted RBP13.35□□□□□ -0.27
CTNS-203ENST00000399306 HAPLN4Q86UW8 402 aa13.35□□□□□ -0.27
CTNS-203ENST00000399306 NARS2Q96I59 477 aaKnown RBP13.35□□□□□ -0.27
CTNS-203ENST00000399306 RNF126Q9BV68 326 aa13.35□□□□□ -0.27
CTNS-203ENST00000399306 VSIRQ9H7M9 311 aa13.35□□□□□ -0.27
CTNS-203ENST00000399306 MLXQ9UH92 298 aa13.35□□□□□ -0.27
CTNS-203ENST00000399306 PFDN2Q9UHV9 154 aa13.35□□□□□ -0.27
CTNS-203ENST00000399306 IGSF23A1L1A6 192 aa13.34□□□□□ -0.27
CTNS-203ENST00000399306 CHEK1O14757 476 aa13.34□□□□□ -0.27
CTNS-203ENST00000399306 GP9P14770 177 aa13.34□□□□□ -0.27
CTNS-203ENST00000399306 RAP2BP61225 183 aa13.34□□□□□ -0.27
CTNS-203ENST00000399306 ARL16Q0P5N6 197 aa13.34□□□□□ -0.27
CTNS-203ENST00000399306 LRRC37A5PQ49AS3 106 aa13.34□□□□□ -0.27
CTNS-203ENST00000399306 LAMTOR1Q6IAA8 161 aa13.34□□□□□ -0.27
CTNS-203ENST00000399306 TEPPQ6URK8 271 aa13.34□□□□□ -0.27
CTNS-203ENST00000399306 OR5AC2Q9NZP5 309 aa13.34□□□□□ -0.27
CTNS-203ENST00000399306 SLC45A2Q9UMX9 530 aa13.34□□□□□ -0.27
CTNS-203ENST00000399306 LSM4Q9Y4Z0 139 aaKnown RBP13.34□□□□□ -0.27
CTNS-203ENST00000399306 U3KQE9 123 aa13.34□□□□□ -0.27
CTNS-203ENST00000399306 TSPAN4O14817 238 aa13.33□□□□□ -0.28
CTNS-203ENST00000399306 IL4P05112 153 aa13.33□□□□□ -0.28
CTNS-203ENST00000399306 BTNL8Q6UX41 500 aa13.33□□□□□ -0.28
CTNS-203ENST00000399306 RNF125Q96EQ8 232 aa13.33□□□□□ -0.28
CTNS-203ENST00000399306 RHPN1-AS1Q9BWJ2 59 aa13.33□□□□□ -0.28
CTNS-203ENST00000399306 CST7O76096 145 aa13.32□□□□□ -0.28
CTNS-203ENST00000399306 HNRNPCP07910 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
CTNS-203ENST00000399306 EDN2P20800 178 aa13.32□□□□□ -0.28
CTNS-203ENST00000399306 S100A7P31151 101 aa13.32□□□□□ -0.28
CTNS-203ENST00000399306 ZNF90Q03938 601 aa13.32□□□□□ -0.28
CTNS-203ENST00000399306 BPIFCQ8NFQ6 507 aa13.32□□□□□ -0.28
CTNS-203ENST00000399306 THAP6Q8TBB0 222 aa13.32□□□□□ -0.28
CTNS-203ENST00000399306 CHAC2Q8WUX2 184 aa13.32□□□□□ -0.28
CTNS-203ENST00000399306 WDR89Q96FK6 387 aaPredicted RBP13.32□□□□□ -0.28
CTNS-203ENST00000399306 SPAG8Q99932 426 aaPredicted RBP13.32□□□□□ -0.28
CTNS-203ENST00000399306 TMEM147Q9BVK8 224 aa13.32□□□□□ -0.28
CTNS-203ENST00000399306 UQCC1Q9NVA1 299 aa13.32□□□□□ -0.28
CTNS-203ENST00000399306 RABAC1Q9UI14 185 aa13.32□□□□□ -0.28
CTNS-203ENST00000399306 IGHV3OR16-8A0A075B7F1 116 aa13.31□□□□□ -0.28
CTNS-203ENST00000399306 SMCO3A2RU48 225 aa13.31□□□□□ -0.28
CTNS-203ENST00000399306 ZNF785A8K8V0 405 aa13.31□□□□□ -0.28
CTNS-203ENST00000399306 ZNF207O43670 478 aaKnown RBP13.31□□□□□ -0.28
CTNS-203ENST00000399306 MPDU1O75352 247 aa13.31□□□□□ -0.28
CTNS-203ENST00000399306 PLP1P60201 277 aa13.31□□□□□ -0.28
CTNS-203ENST00000399306 EWSR1Q01844 656 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTNS-203ENST00000399306 RAB31Q13636 194 aa13.31□□□□□ -0.28
CTNS-203ENST00000399306 USF2Q15853 346 aaPredicted RBP13.31□□□□□ -0.28
CTNS-203ENST00000399306 PXDC1Q5TGL8 231 aa13.31□□□□□ -0.28
CTNS-203ENST00000399306 RBPMS2Q6ZRY4 209 aaKnown RBP13.31□□□□□ -0.28
CTNS-203ENST00000399306 CYP2G1PQ6ZSU1 146 aa13.31□□□□□ -0.28
CTNS-203ENST00000399306 TMEM61Q8N0U2 210 aa13.31□□□□□ -0.28
CTNS-203ENST00000399306 LILRB2Q8N423 598 aa13.31□□□□□ -0.28
CTNS-203ENST00000399306 GRAMD2BQ96HH9 432 aa13.31□□□□□ -0.28
CTNS-203ENST00000399306 WDR83OSQ9Y284 106 aa13.31□□□□□ -0.28
CTNS-203ENST00000399306 EIF2B2P49770 351 aaKnown RBP13.3□□□□□ -0.28
CTNS-203ENST00000399306 FAM90A2PQ658T7 463 aa13.3□□□□□ -0.28
CTNS-203ENST00000399306 S100A7AQ86SG5 101 aa13.3□□□□□ -0.28
CTNS-203ENST00000399306 ZNF546Q86UE3 836 aa13.3□□□□□ -0.28
CTNS-203ENST00000399306 MBD2Q9UBB5 411 aa13.3□□□□□ -0.28
CTNS-203ENST00000399306 TRAV2A0A0B4J234 112 aa13.29□□□□□ -0.28
CTNS-203ENST00000399306 IZUMO1RA6ND01 250 aa13.29□□□□□ -0.28
CTNS-203ENST00000399306 K7EIL1 84 aa13.29□□□□□ -0.28
CTNS-203ENST00000399306 RPL12P30050 165 aaKnown RBP13.29□□□□□ -0.28
CTNS-203ENST00000399306 C1orf194Q5T5A4 169 aa13.29□□□□□ -0.28
CTNS-203ENST00000399306 TMEM217Q8N7C4 229 aa13.29□□□□□ -0.28
CTNS-203ENST00000399306 RNF2Q99496 336 aa13.29□□□□□ -0.28
CTNS-203ENST00000399306 BUB3O43684 328 aa13.28□□□□□ -0.28
CTNS-203ENST00000399306 NHLH2Q02577 135 aa13.28□□□□□ -0.28
CTNS-203ENST00000399306 GTSCR1Q86UQ5 136 aa13.28□□□□□ -0.28
CTNS-203ENST00000399306 OR5C1Q8NGR4 320 aa13.28□□□□□ -0.28
CTNS-203ENST00000399306 ST8SIA2Q92186 375 aa13.28□□□□□ -0.28
CTNS-203ENST00000399306 PRR25Q96S07 402 aa13.28□□□□□ -0.28
CTNS-203ENST00000399306 FAM110AQ9BQ89 295 aa13.28□□□□□ -0.28
CTNS-203ENST00000399306 RNF24Q9Y225 148 aa13.28□□□□□ -0.28
CTNS-203ENST00000399306 HSPB11Q9Y547 144 aa13.28□□□□□ -0.28
CTNS-203ENST00000399306 PRKDCP78527 4128 aaKnown RBP13.27□□□□□ -0.28
CTNS-203ENST00000399306 HELTA6NFD8 242 aa13.27□□□□□ -0.29
CTNS-203ENST00000399306 APOHP02749 345 aaPredicted RBP13.27□□□□□ -0.29
CTNS-203ENST00000399306 AP2S1P53680 142 aaPredicted RBP13.27□□□□□ -0.29
CTNS-203ENST00000399306 CMC4P56277 68 aaPredicted RBP13.27□□□□□ -0.29
CTNS-203ENST00000399306 LYZP61626 148 aa13.27□□□□□ -0.29
CTNS-203ENST00000399306 PAFAH1B2P68402 229 aa13.27□□□□□ -0.29
CTNS-203ENST00000399306 OR2F1Q13607 317 aa13.27□□□□□ -0.29
CTNS-203ENST00000399306 C16orf54Q6UWD8 224 aa13.27□□□□□ -0.29
CTNS-203ENST00000399306 FBXL17Q9UF56 701 aa13.27□□□□□ -0.29
CTNS-203ENST00000399306 OR4C46A6NHA9 309 aa13.26□□□□□ -0.29
CTNS-203ENST00000399306 A8MZ25 164 aa13.26□□□□□ -0.29
CTNS-203ENST00000399306 AGPAT2O15120 278 aa13.26□□□□□ -0.29
CTNS-203ENST00000399306 DFFBO76075 338 aa13.26□□□□□ -0.29
CTNS-203ENST00000399306 PRB2P02812 416 aaPredicted RBP13.26□□□□□ -0.29
CTNS-203ENST00000399306 Q6ZNX1 250 aa13.26□□□□□ -0.29
CTNS-203ENST00000399306 TCF24Q7RTU0 167 aa13.26□□□□□ -0.29
CTNS-203ENST00000399306 Q8N1Y9 231 aa13.26□□□□□ -0.29
CTNS-203ENST00000399306 MRAPQ8TCY5 172 aa13.26□□□□□ -0.29
CTNS-203ENST00000399306 GLMPQ8WWB7 406 aa13.26□□□□□ -0.29
CTNS-203ENST00000399306 AQP10Q96PS8 301 aa13.26□□□□□ -0.29
CTNS-203ENST00000399306 MGST2Q99735 147 aa13.26□□□□□ -0.29
CTNS-203ENST00000399306 PBDC1Q9BVG4 233 aa13.26□□□□□ -0.29
CTNS-203ENST00000399306 LINC00869P0C866 280 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms