RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 TNFRSF1AP19438 455 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 IGHV3-64A0A075B6Q5 118 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 IGHV1OR15-9A0A0B4J2B8 117 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 METTL26Q96S19 204 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 RPP25Q9BUL9 199 aaKnown RBP8□□□□□ -1.13
SMAD9-203ENST00000399275 FOXI3A8MTJ6 420 aaPredicted RBP8□□□□□ -1.13
SMAD9-203ENST00000399275 RPL27AP46776 148 aaKnown RBP8□□□□□ -1.13
SMAD9-203ENST00000399275 MORN5Q5VZ52 161 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 TNFRSF18Q9Y5U5 241 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 A0A1B0GUS0 222 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 FABP5P3A8MUU1 101 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 PROB1E7EW31 1015 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 M0R1B8 84 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 TNFAIP6P98066 277 aaPredicted RBP8□□□□□ -1.13
SMAD9-203ENST00000399275 TSC2P49815 1807 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 C5orf67F2Z3F1 127 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 F2RL2O00254 374 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 LINC01565O15544 149 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 SRSF7Q16629 238 aaKnown RBP eCLIP7.99□□□□□ -1.13
SMAD9-203ENST00000399275 OR13A1Q8NGR1 328 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 TCF19Q9Y242 345 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 IGKV3D-20A0A0C4DH25 116 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 RS1O15537 224 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 LILRA1O75019 489 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 LAGE3Q14657 143 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 TMEM86BQ8N661 226 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 NUP35Q8NFH5 326 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 FDCSPQ8NFU4 85 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 TRGV5A0A0B4J1U4 118 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 FGF6P10767 208 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 QRFPP83859 136 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 SIT1Q9Y3P8 196 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 Q6ZS52 159 aa7.99□□□□□ -1.13
SMAD9-203ENST00000399275 ZNF501Q96CX3 271 aaPredicted RBP7.99□□□□□ -1.13
SMAD9-203ENST00000399275 C9JQL5 133 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 IL18BPO95998 194 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 SPTBP11277 2137 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 RBX1P62877 108 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 SLC22A18ASQ8N1D0 253 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 C1orf162Q8NEQ5 155 aaPredicted RBP7.98□□□□□ -1.13
SMAD9-203ENST00000399275 SP7Q8TDD2 431 aaPredicted RBP7.98□□□□□ -1.13
SMAD9-203ENST00000399275 OTOFQ9HC10 1997 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 IGKV1-9A0A0C4DH69 117 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 TGFBR3LH3BV60 316 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 MIR17HGQ75NE6 70 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 SIGLEC8Q9NYZ4 499 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 ZNF319Q9P2F9 582 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 PEMTQ9UBM1 199 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 RLFQ13129 1914 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 K7ERJ3 54 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 IGLC1P0CG04 106 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 COX7A1P24310 79 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 RPL32P62910 135 aaKnown RBP7.98□□□□□ -1.13
SMAD9-203ENST00000399275 ATP5G2Q06055 141 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 EBLN2Q6P2I7 272 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 CARD19Q96LW7 228 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 COLQQ9Y215 455 aaPredicted RBP7.98□□□□□ -1.13
SMAD9-203ENST00000399275 A0A1W2PPI3 338 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 STPG1Q5TH74 334 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 HCP5Q6MZN7 132 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 SLC25A48Q6ZT89 311 aaKnown RBP7.98□□□□□ -1.13
SMAD9-203ENST00000399275 GREB1Q4ZG55 1949 aa7.98□□□□□ -1.13
SMAD9-203ENST00000399275 IQCF6A8MYZ5 107 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 SRD5A1P18405 259 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 CEND1Q8N111 149 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 SCN10AQ9Y5Y9 1956 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 SLC25A53Q5H9E4 307 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 PRSS57Q6UWY2 283 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 DOCK4Q8N1I0 1966 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 TAL2Q16559 108 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 MYLKQ15746 1914 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 C9JCJ5 164 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 D6R8Y8 96 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 PYYP10082 97 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 RNASE2P10153 161 aaKnown RBP7.97□□□□□ -1.13
SMAD9-203ENST00000399275 PSG8Q9UQ74 426 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 CD55P08174 381 aa7.97□□□□□ -1.13
SMAD9-203ENST00000399275 ASXL3Q9C0F0 2248 aa7.96□□□□□ -1.13
SMAD9-203ENST00000399275 IGKV1D-8A0A087WSZ0 117 aa7.96□□□□□ -1.13
SMAD9-203ENST00000399275 PFN1P07737 140 aaKnown RBP7.96□□□□□ -1.13
SMAD9-203ENST00000399275 MALP21145 153 aa7.96□□□□□ -1.13
SMAD9-203ENST00000399275 FXYD7P58549 80 aa7.96□□□□□ -1.13
SMAD9-203ENST00000399275 CACNG8Q8WXS5 425 aa7.96□□□□□ -1.13
SMAD9-203ENST00000399275 RP1P56715 2156 aa7.96□□□□□ -1.13
SMAD9-203ENST00000399275 C9orf172C9J069 976 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 NEGR1Q7Z3B1 354 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 FLVCR1-AS1Q8TAF5 88 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 VOPP1Q96AW1 172 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 PRO1854Q9UHT4 67 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 C2CD4DB7Z1M9 353 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 NDUFV3P56181 108 aaKnown RBP7.96□□□□□ -1.14
SMAD9-203ENST00000399275 FOXI1Q12951 378 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 ZNF146Q15072 292 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 GCSAMQ8N6F7 178 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 DDB2Q92466 427 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 TRAV12-1A0A0B4J245 112 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 ZNF138P52744 262 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 FHL1Q13642 323 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 ANAPC10Q9UM13 185 aa7.96□□□□□ -1.14
SMAD9-203ENST00000399275 PLXNA3P51805 1871 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms