RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ANAPC10Q9UM13 185 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 IGKV1-12A0A0C4DH73 117 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 PINLYPA6NC86 204 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 FAM231BA6NCW3 169 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 IGKV1D-12P01611 117 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 TMEM155Q4W5P6 130 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 GAFA1Q96PS6 74 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 GAGE13Q4V321 117 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 CT83Q5H943 113 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 LINC01551Q86U37 167 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 ZNF479Q96JC4 524 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 NHP2Q9NX24 153 aaKnown RBP6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 MBD3L4A6NDZ8 208 aaPredicted RBP6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 MBD3L3A6NE82 208 aaPredicted RBP6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 MBD3L5A6NJ08 208 aaPredicted RBP6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 VCYO14598 125 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 BOD1L2Q8IYS8 172 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 MDS2Q8NDY4 140 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 MBD3L2Q8NHZ7 208 aaPredicted RBP6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 ST6GALNAC6Q969X2 333 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 LGALS1P09382 135 aaKnown RBP6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 ZNF329Q86UD4 541 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 DPH3Q96FX2 82 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 VSIRQ9H7M9 311 aa6.88□□□□□ -1.31
SPTLC3-201ENST00000399002 IGHG3P01860 377 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 DMRTA2Q96SC8 542 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 ZNF319Q9P2F9 582 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 METRNQ9UJH8 293 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 IGKV1-27A0A075B6S5 117 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 GGTLC3B5MD39 225 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 SH2D1AO60880 128 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 IGHV4-39P01824 125 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 TRGV4A0A0C4DH28 118 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 CD55P08174 381 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 KLF17Q5JT82 389 aaPredicted RBP6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 CD177Q8N6Q3 437 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 BUB1B-PAK6H3BSN5 160 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 TMEM105Q8N8V8 129 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 ANAPC13Q9BS18 74 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 IGKV1D-8A0A087WSZ0 117 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 NDUFS8O00217 210 aa6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 SMAD7O15105 426 aaKnown RBP6.87□□□□□ -1.31
SPTLC3-201ENST00000399002 DOCK4Q8N1I0 1966 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 TRAV2A0A0B4J234 112 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 TEX43Q6ZNM6 134 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 LINC00469Q8N7U9 141 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 Q8TCH9 128 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 TMEM141Q96I45 108 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 C1QTNF4Q9BXJ3 329 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 AKIRIN1Q9H9L7 192 aaPredicted RBP6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 S4R3C0 116 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 CXCL1P09341 107 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 CD59P13987 128 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 MST1P26927 711 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 ST6GALNAC3Q8NDV1 305 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 NDUFB8O95169 186 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 GZMBP10144 247 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 SLC25A16P16260 332 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 RCHY1Q96PM5 261 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 VGLL1Q99990 258 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 FNDC4Q9H6D8 234 aaPredicted RBP6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 TOMM7Q9P0U1 55 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 TGFAP01135 160 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 IGKV1-5P01602 117 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 GATA3P23771 443 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 Q0VG73 95 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 FOXF2Q12947 444 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 ZNF672Q499Z4 452 aaPredicted RBP6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 CHD5Q8TDI0 1954 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 IGHV3OR16-13A0A075B7E8 117 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 IGHV3-49A0A0A0MS15 119 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 IGHV3-74A0A0B4J1X5 117 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 OR10W1Q8NGF6 305 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 FGFBP3Q8TAT2 258 aa6.86□□□□□ -1.31
SPTLC3-201ENST00000399002 INSP01308 110 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 PSG1P11464 419 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 B3GALT5-AS1P59052 145 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 RNF166Q96A37 237 aaPredicted RBP6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 RFNGQ9Y644 331 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 IGHV3-35A0A0C4DH35 117 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 D6R8Y8 96 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 C5orf64Q2M2E5 130 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 MUC21Q5SSG8 566 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 NUP35Q8NFH5 326 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 EFNA2O43921 213 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 RPL36AP83881 106 aaKnown RBP6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 SRSF6Q13247 344 aaKnown RBP6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 NEGR1Q7Z3B1 354 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 RPL36ALQ969Q0 106 aaKnown RBP6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 ETV2O00321 342 aaPredicted RBP6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 CDKN1AP38936 164 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 SSBP2P81877 361 aaPredicted RBP6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 LYZL1Q6UWQ5 148 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 Q86TA4 180 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 DNAJC30Q96LL9 226 aa6.85□□□□□ -1.31
SPTLC3-201ENST00000399002 MYMXA0A1B0GTQ4 84 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 MLNRO43193 412 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 SNAI2O43623 268 aa6.84□□□□□ -1.31
SPTLC3-201ENST00000399002 SHANK2-AS3Q9BTD1 123 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms