RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 I3L521 148 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 OR2C1O95371 312 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 HSPB1P04792 205 aaKnown RBP18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 LINC00869P0C866 280 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 PSG1P11464 419 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 S100A7P31151 101 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 ADMP35318 185 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 KRTAP24-1Q3LI83 254 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 KLHL30-AS1Q8NEE0 82 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 OR1L4Q8NGR5 311 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 TMEM158Q8WZ71 300 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 OR5B12Q96R08 314 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 C19orf24Q9BVV8 132 aa18.19■□□□□ 0.5
TSPAN4-202ENST00000397396 PFDN5Q99471 154 aa18.18■□□□□ 0.5
TSPAN4-202ENST00000397396 CITED2Q99967 270 aaPredicted RBP18.18■□□□□ 0.5
TSPAN4-202ENST00000397396 PPP5D1E7EU14 171 aa18.17■□□□□ 0.5
TSPAN4-202ENST00000397396 BMPR1BO00238 502 aa18.17■□□□□ 0.5
TSPAN4-202ENST00000397396 NDUFA4O00483 81 aa18.17■□□□□ 0.5
TSPAN4-202ENST00000397396 M6PRP20645 277 aa18.17■□□□□ 0.5
TSPAN4-202ENST00000397396 ZP3P21754 424 aa18.17■□□□□ 0.5
TSPAN4-202ENST00000397396 PLP1P60201 277 aa18.17■□□□□ 0.5
TSPAN4-202ENST00000397396 RPEL1Q2QD12 228 aa18.17■□□□□ 0.5
TSPAN4-202ENST00000397396 DPPA3Q6W0C5 159 aa18.17■□□□□ 0.5
TSPAN4-202ENST00000397396 TMEM182Q6ZP80 229 aaPredicted RBP18.17■□□□□ 0.5
TSPAN4-202ENST00000397396 NDUFA11Q86Y39 141 aa18.17■□□□□ 0.5
TSPAN4-202ENST00000397396 RNF2Q99496 336 aa18.17■□□□□ 0.5
TSPAN4-202ENST00000397396 UBQLN2Q9UHD9 624 aa18.17■□□□□ 0.5
TSPAN4-202ENST00000397396 ELOA3CA0A087WX78 387 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-202ENST00000397396 ELLP55199 621 aaPredicted RBP18.16■□□□□ 0.5
TSPAN4-202ENST00000397396 TMEM41BQ5BJD5 291 aa18.16■□□□□ 0.5
TSPAN4-202ENST00000397396 ALKAL2Q6UX46 152 aa18.16■□□□□ 0.5
TSPAN4-202ENST00000397396 ZNF767PQ75MW2 155 aa18.16■□□□□ 0.5
TSPAN4-202ENST00000397396 C11orf44Q8N8P7 122 aa18.16■□□□□ 0.5
TSPAN4-202ENST00000397396 ZNF680Q8NEM1 530 aa18.16■□□□□ 0.5
TSPAN4-202ENST00000397396 LRRC20Q8TCA0 184 aa18.16■□□□□ 0.5
TSPAN4-202ENST00000397396 DPF1Q92782 380 aa18.16■□□□□ 0.5
TSPAN4-202ENST00000397396 RNF125Q96EQ8 232 aa18.16■□□□□ 0.5
TSPAN4-202ENST00000397396 PUS1Q9Y606 427 aaKnown RBP eCLIP18.16■□□□□ 0.5
TSPAN4-202ENST00000397396 LINC01619G3V211 115 aa18.15■□□□□ 0.5
TSPAN4-202ENST00000397396 COX7A2P2O60397 106 aa18.15■□□□□ 0.5
TSPAN4-202ENST00000397396 TRBV12-3P01733 135 aa18.15■□□□□ 0.5
TSPAN4-202ENST00000397396 IL4P05112 153 aa18.15■□□□□ 0.5
TSPAN4-202ENST00000397396 GATA2P23769 480 aaPredicted RBP18.15■□□□□ 0.5
TSPAN4-202ENST00000397396 FAM106AQ4KMX7 169 aa18.15■□□□□ 0.5
TSPAN4-202ENST00000397396 GATAD1Q8WUU5 269 aa18.15■□□□□ 0.5
TSPAN4-202ENST00000397396 RNF141Q8WVD5 230 aa18.15■□□□□ 0.5
TSPAN4-202ENST00000397396 PFDN2Q9UHV9 154 aa18.15■□□□□ 0.5
TSPAN4-202ENST00000397396 RNF24Q9Y225 148 aa18.15■□□□□ 0.5
TSPAN4-202ENST00000397396 WI2-2373I1.2A0A1W2PRP0 233 aa18.14■□□□□ 0.49
TSPAN4-202ENST00000397396 YIF1AO95070 293 aa18.14■□□□□ 0.49
TSPAN4-202ENST00000397396 SULT1A2P50226 295 aa18.14■□□□□ 0.49
TSPAN4-202ENST00000397396 LYZP61626 148 aa18.14■□□□□ 0.49
TSPAN4-202ENST00000397396 GPHB5Q86YW7 130 aa18.14■□□□□ 0.49
TSPAN4-202ENST00000397396 HYPMO75409 117 aa18.13■□□□□ 0.49
TSPAN4-202ENST00000397396 IGHV4OR15-8A0A075B7B6 117 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 A0A087WW49 117 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 ORM2P19652 201 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 C10orf113Q5VZT2 155 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 TOMM20LQ6UXN7 152 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 OR11H1Q8NG94 326 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 OR10G4Q8NGN3 311 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 OR10G9Q8NGN4 311 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 OR10G7Q8NGN6 311 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 OR1B1Q8NGR6 318 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 OR1N2Q8NGR9 330 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 PBDC1Q9BVG4 233 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 MRPL32Q9BYC8 188 aaKnown RBP18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 DNAJC4Q9NNZ3 241 aa18.12■□□□□ 0.49
TSPAN4-202ENST00000397396 OR5G3P0C626 314 aa18.11■□□□□ 0.49
TSPAN4-202ENST00000397396 RHOBP62745 196 aa18.11■□□□□ 0.49
TSPAN4-202ENST00000397396 C8orf86Q6ZUL3 223 aa18.11■□□□□ 0.49
TSPAN4-202ENST00000397396 TMEM190Q8WZ59 177 aa18.11■□□□□ 0.49
TSPAN4-202ENST00000397396 RABAC1Q9UI14 185 aa18.11■□□□□ 0.49
TSPAN4-202ENST00000397396 HIGD1AQ9Y241 93 aa18.11■□□□□ 0.49
TSPAN4-202ENST00000397396 RFNGQ9Y644 331 aa18.11■□□□□ 0.49
TSPAN4-202ENST00000397396 A0A1W2PPV4 95 aa18.1■□□□□ 0.49
TSPAN4-202ENST00000397396 A0A1W2PRX2 142 aa18.1■□□□□ 0.49
TSPAN4-202ENST00000397396 RAB2AP61019 212 aa18.1■□□□□ 0.49
TSPAN4-202ENST00000397396 C18orf65Q6ZTR6 163 aa18.1■□□□□ 0.49
TSPAN4-202ENST00000397396 NARS2Q96I59 477 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-202ENST00000397396 CITED1Q99966 193 aa18.1■□□□□ 0.49
TSPAN4-202ENST00000397396 ACTR3CQ9C0K3 210 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-202ENST00000397396 ZFAND3Q9H8U3 227 aa18.1■□□□□ 0.49
TSPAN4-202ENST00000397396 UFC1Q9Y3C8 167 aa18.1■□□□□ 0.49
TSPAN4-202ENST00000397396 IGHV3-35A0A0C4DH35 117 aa18.09■□□□□ 0.49
TSPAN4-202ENST00000397396 HOXD3P31249 432 aaPredicted RBP18.09■□□□□ 0.49
TSPAN4-202ENST00000397396 KRTAP10-3P60369 221 aa18.09■□□□□ 0.49
TSPAN4-202ENST00000397396 IFITM2Q01629 132 aa18.09■□□□□ 0.49
TSPAN4-202ENST00000397396 REC114Q7Z4M0 266 aa18.09■□□□□ 0.49
TSPAN4-202ENST00000397396 C1QL4Q86Z23 238 aa18.09■□□□□ 0.49
TSPAN4-202ENST00000397396 METTL26Q96S19 204 aa18.09■□□□□ 0.49
TSPAN4-202ENST00000397396 RPRMQ9NS64 109 aa18.09■□□□□ 0.49
TSPAN4-202ENST00000397396 MRPL27Q9P0M9 148 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-202ENST00000397396 DOK5Q9P104 306 aa18.09■□□□□ 0.49
TSPAN4-202ENST00000397396 SEC14L6B5MCN3 397 aa18.08■□□□□ 0.49
TSPAN4-202ENST00000397396 LGALS9O00182 355 aa18.08■□□□□ 0.49
TSPAN4-202ENST00000397396 RGS13O14921 159 aa18.08■□□□□ 0.49
TSPAN4-202ENST00000397396 CDC34P49427 236 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-202ENST00000397396 BLOC1S1P78537 153 aa18.08■□□□□ 0.49
TSPAN4-202ENST00000397396 FHL3Q13643 280 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms