RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 PXMP4Q9Y6I8 212 aa11.77□□□□□ -0.53
TM9SF1-202ENST00000396854 IGHV4-59P01825 116 aa11.76□□□□□ -0.53
TM9SF1-202ENST00000396854 STAG3L2P0CL84 134 aa11.76□□□□□ -0.53
TM9SF1-202ENST00000396854 STAG3L3P0CL85 134 aa11.76□□□□□ -0.53
TM9SF1-202ENST00000396854 Q71RC1 249 aaPredicted RBP11.76□□□□□ -0.53
TM9SF1-202ENST00000396854 SIGLECL1Q8N7X8 197 aa11.76□□□□□ -0.53
TM9SF1-202ENST00000396854 SSMEM1Q8WWF3 244 aa11.76□□□□□ -0.53
TM9SF1-202ENST00000396854 IMMP2LQ96T52 175 aa11.76□□□□□ -0.53
TM9SF1-202ENST00000396854 ZNF257Q9Y2Q1 563 aa11.76□□□□□ -0.53
TM9SF1-202ENST00000396854 SIGLEC9Q9Y336 463 aa11.76□□□□□ -0.53
TM9SF1-202ENST00000396854 LSM4Q9Y4Z0 139 aaKnown RBP11.76□□□□□ -0.53
TM9SF1-202ENST00000396854 F8P00451 2351 aa11.76□□□□□ -0.53
TM9SF1-202ENST00000396854 XKRY2A2RUG3 117 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 INAFM1C9JVW0 142 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 CXorf1O96002 111 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 AMBPP02760 352 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 UBE2G2P60604 165 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 HSPE1P61604 102 aaKnown RBP11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 GAMTQ14353 236 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 MRGPRG-AS1Q2M3A8 158 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 CST9LP1Q5W188 147 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 BTF3L4Q96K17 158 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 SLC25A33Q9BSK2 321 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 TPSG1Q9NRR2 321 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 NDUFB4O95168 129 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 ARL14EPLP0DKL9 152 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 C5orf64Q2M2E5 130 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 PPP1R27Q86WC6 154 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 TMEM86BQ8N661 226 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 Q8N9W7 124 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 FBXL15Q9H469 300 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 VPREB3Q9UKI3 123 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 MOB4Q9Y3A3 225 aa11.75□□□□□ -0.53
TM9SF1-202ENST00000396854 NSD1Q96L73 2696 aaPredicted RBP11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 HOXA3O43365 443 aaPredicted RBP11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 PKIAP61925 76 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 JOSD1Q15040 202 aaPredicted RBP11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 LY6EQ16553 131 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 MIC13Q5XKP0 118 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 TMEM144Q7Z5S9 345 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 TMEM219Q86XT9 240 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 NPVFQ9HCQ7 196 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 FKBP11Q9NYL4 201 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 OR51B2Q9Y5P1 312 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 NCBP2LA6PVI3 153 aaKnown RBP11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 CHRNA7P36544 502 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 RPL8P62917 257 aaKnown RBP11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 DEFA6Q01524 100 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 PRSS8Q16651 343 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 MMD2Q8IY49 270 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 DERL1Q9BUN8 251 aa11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 ZNF430Q9H8G1 570 aaPredicted RBP11.74□□□□□ -0.53
TM9SF1-202ENST00000396854 PRCDQ00LT1 54 aa11.73□□□□□ -0.53
TM9SF1-202ENST00000396854 FOXL1Q12952 345 aa11.73□□□□□ -0.53
TM9SF1-202ENST00000396854 PLGLAQ15195 96 aa11.73□□□□□ -0.53
TM9SF1-202ENST00000396854 C5orf56Q8N8D9 126 aa11.73□□□□□ -0.53
TM9SF1-202ENST00000396854 OR5B3Q8NH48 314 aa11.73□□□□□ -0.53
TM9SF1-202ENST00000396854 FUT9Q9Y231 359 aa11.73□□□□□ -0.53
TM9SF1-202ENST00000396854 ARSJQ5FYB0 599 aaPredicted RBP11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 FAM78BQ5VT40 261 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 SLC24A4Q8NFF2 622 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 OR5T1Q8NG75 326 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 PLXNB1O43157 2135 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 FNDC10F2Z333 226 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 M0QZK8 103 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 CRLF1O75462 422 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 HLA-DRB1P01911 266 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 NPY1RP25929 384 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 RPL15P61313 204 aaKnown RBP11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 TEPPQ6URK8 271 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 ZNF114Q8NC26 417 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 TMEM37Q8WXS4 190 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 SFRP2Q96HF1 295 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 RASL11BQ9BPW5 248 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 ENY2Q9NPA8 101 aa11.72□□□□□ -0.53
TM9SF1-202ENST00000396854 TRBV20OR9-2A0A075B6H5 130 aa11.71□□□□□ -0.53
TM9SF1-202ENST00000396854 TSTD3H0UI37 97 aa11.71□□□□□ -0.53
TM9SF1-202ENST00000396854 CA2P00918 260 aa11.71□□□□□ -0.53
TM9SF1-202ENST00000396854 AMY1AP04745 511 aa11.71□□□□□ -0.53
TM9SF1-202ENST00000396854 GZMBP10144 247 aa11.71□□□□□ -0.53
TM9SF1-202ENST00000396854 GPX4P36969 197 aaPredicted RBP11.71□□□□□ -0.53
TM9SF1-202ENST00000396854 RHOBP62745 196 aa11.71□□□□□ -0.53
TM9SF1-202ENST00000396854 SSBP2P81877 361 aaPredicted RBP11.71□□□□□ -0.53
TM9SF1-202ENST00000396854 FCN1O00602 326 aa11.71□□□□□ -0.54
TM9SF1-202ENST00000396854 GCHFRP30047 84 aa11.71□□□□□ -0.54
TM9SF1-202ENST00000396854 RPL29P47914 159 aaKnown RBP11.71□□□□□ -0.54
TM9SF1-202ENST00000396854 LINC00469Q8N7U9 141 aa11.71□□□□□ -0.54
TM9SF1-202ENST00000396854 STPG3Q8N7X2 389 aa11.71□□□□□ -0.54
TM9SF1-202ENST00000396854 COMMD5Q9GZQ3 224 aa11.71□□□□□ -0.54
TM9SF1-202ENST00000396854 PLEKHA3Q9HB20 300 aa11.71□□□□□ -0.54
TM9SF1-202ENST00000396854 MTORP42345 2549 aa11.7□□□□□ -0.54
TM9SF1-202ENST00000396854 TEX50A0A1B0GTY4 177 aa11.7□□□□□ -0.54
TM9SF1-202ENST00000396854 SCO2A0A1W2PP80 73 aa11.7□□□□□ -0.54
TM9SF1-202ENST00000396854 INS-IGF2F8WCM5 200 aa11.7□□□□□ -0.54
TM9SF1-202ENST00000396854 GCGP01275 180 aa11.7□□□□□ -0.54
TM9SF1-202ENST00000396854 MYOD1P15172 320 aa11.7□□□□□ -0.54
TM9SF1-202ENST00000396854 COMPP49747 757 aaPredicted RBP11.7□□□□□ -0.54
TM9SF1-202ENST00000396854 RAB31Q13636 194 aa11.7□□□□□ -0.54
TM9SF1-202ENST00000396854 ZNF418Q8TF45 676 aaPredicted RBP11.7□□□□□ -0.54
TM9SF1-202ENST00000396854 C11orf52Q96A22 123 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms