RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 TMEM144Q7Z5S9 345 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 IGHV3-73A0A0B4J1V6 119 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 CCL20P78556 96 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 DMRTC2Q8IXT2 367 aaPredicted RBP8.67□□□□□ -1.02
COL4A4-201ENST00000396625 SNHG12Q9BXW3 62 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 R3HDMLQ9H3Y0 253 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 MSGN1A6NI15 193 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 C1QAP02745 245 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 TMEM258P61165 79 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 PSG3Q16557 428 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 POU2AF1Q16633 256 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 SLC25A47Q6Q0C1 308 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 TRBV5-3A0A0A0MS03 114 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 C9JAW5 83 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 PSCAO43653 123 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 C1QTNF9P0C862 333 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 INAFM2P0DMQ5 153 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 PRADC1Q9BSG0 188 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 ZSWIM8A7E2V4 1837 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 B9A039 149 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 UMODP07911 640 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 TCTEX1D4Q5JR98 221 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 COL24A1Q17RW2 1714 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 LINC01549A6NIU2 74 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 A0A0G2JMZ2 1700 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 LRRC37A2A6NM11 1700 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 LRRC37AA6NMS7 1700 aa8.67□□□□□ -1.02
COL4A4-201ENST00000396625 COL5A3P25940 1745 aaPredicted RBP8.67□□□□□ -1.02
COL4A4-201ENST00000396625 D6R8Y8 96 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 RAMP3O60896 148 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 LCNL1Q6ZST4 164 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 NLRC5Q86WI3 1866 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 A0A1W2PQF6 199 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 RNF125Q96EQ8 232 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 LOC101059948A0A1B0GTJ6 334 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 IGHMP01871 453 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 CXCL10P02778 98 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 CELA2AP08217 269 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 DUTP33316 252 aaKnown RBP8.66□□□□□ -1.02
COL4A4-201ENST00000396625 SLC25A48Q6ZT89 311 aaKnown RBP8.66□□□□□ -1.02
COL4A4-201ENST00000396625 UCNP55089 124 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 HIST3H2BBQ8N257 126 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 TSKUQ8WUA8 353 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 NABP1Q96AH0 204 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 OSTCQ9NRP0 149 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 C17orf98A8MV24 154 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 LHX2P50458 406 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 SIGLEC15Q6ZMC9 328 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 A0A087WX48 190 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 GATA2P23769 480 aaPredicted RBP8.66□□□□□ -1.02
COL4A4-201ENST00000396625 CLPSL1A2RUU4 121 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 FBLIM1Q8WUP2 373 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 AMELYQ99218 206 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 TIMM21Q9BVV7 248 aa8.66□□□□□ -1.02
COL4A4-201ENST00000396625 hADV29S1A0JD25 119 aa8.65□□□□□ -1.02
COL4A4-201ENST00000396625 hDV102S1A0JD36 115 aa8.65□□□□□ -1.02
COL4A4-201ENST00000396625 DLEU1O43261 78 aa8.65□□□□□ -1.02
COL4A4-201ENST00000396625 TCRAP04437 139 aa8.65□□□□□ -1.02
COL4A4-201ENST00000396625 IGHV3-11P01762 117 aa8.65□□□□□ -1.02
COL4A4-201ENST00000396625 AMBPP02760 352 aa8.65□□□□□ -1.02
COL4A4-201ENST00000396625 HEPN1Q6WQI6 88 aa8.65□□□□□ -1.02
COL4A4-201ENST00000396625 ZNF703Q9H7S9 590 aaPredicted RBP8.65□□□□□ -1.02
COL4A4-201ENST00000396625 A0A1W2PPV9 198 aa8.65□□□□□ -1.02
COL4A4-201ENST00000396625 SRXN1Q9BYN0 137 aa8.65□□□□□ -1.02
COL4A4-201ENST00000396625 TMEM242Q9NWH2 141 aa8.65□□□□□ -1.02
COL4A4-201ENST00000396625 PEBP1P30086 187 aaKnown RBP8.65□□□□□ -1.03
COL4A4-201ENST00000396625 ACTL10Q5JWF8 245 aa8.65□□□□□ -1.03
COL4A4-201ENST00000396625 SONP18583 2426 aaKnown RBP8.65□□□□□ -1.03
COL4A4-201ENST00000396625 SAA2-SAA4A0A096LPE2 208 aa8.65□□□□□ -1.03
COL4A4-201ENST00000396625 SAA2P0DJI9 122 aaPredicted RBP8.65□□□□□ -1.03
COL4A4-201ENST00000396625 PVRIGQ6DKI7 326 aa8.65□□□□□ -1.03
COL4A4-201ENST00000396625 RASL10AQ92737 203 aa8.65□□□□□ -1.03
COL4A4-201ENST00000396625 CEP192Q8TEP8 1941 aa8.65□□□□□ -1.03
COL4A4-201ENST00000396625 IGLV1-36A0A0B4J1U3 117 aa8.65□□□□□ -1.03
COL4A4-201ENST00000396625 TCRBV4S1A1TA0A5B7 111 aa8.65□□□□□ -1.03
COL4A4-201ENST00000396625 EGR2P11161 476 aaPredicted RBP8.65□□□□□ -1.03
COL4A4-201ENST00000396625 CHAC1Q9BUX1 264 aa8.65□□□□□ -1.03
COL4A4-201ENST00000396625 SOCS3O14543 225 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 C5orf47Q569G3 176 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 SRSF3P84103 164 aaKnown RBP8.64□□□□□ -1.03
COL4A4-201ENST00000396625 OR13A1Q8NGR1 328 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 PPIFP30405 207 aaKnown RBP8.64□□□□□ -1.03
COL4A4-201ENST00000396625 IMMP1LQ96LU5 166 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 TIMP3P35625 211 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 MESP2Q0VG99 397 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 KIAA1549LQ6ZVL6 1849 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 MYMXA0A1B0GTQ4 84 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 SCRT1Q9BWW7 348 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 DPM3Q9P2X0 92 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 NBR2O15453 112 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 GZMMP51124 257 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 ZIC4Q8N9L1 334 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 RTBDNQ9BSG5 229 aaPredicted RBP8.64□□□□□ -1.03
COL4A4-201ENST00000396625 SRD5A1P18405 259 aa8.64□□□□□ -1.03
COL4A4-201ENST00000396625 CD200R1LQ6Q8B3 271 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 YBX2Q9Y2T7 364 aaKnown RBP8.63□□□□□ -1.03
COL4A4-201ENST00000396625 FNDC1Q4ZHG4 1894 aaPredicted RBP8.63□□□□□ -1.03
COL4A4-201ENST00000396625 C15orf61A6NNL5 157 aa8.63□□□□□ -1.03
COL4A4-201ENST00000396625 DUSP14O95147 198 aaKnown RBP8.63□□□□□ -1.03
COL4A4-201ENST00000396625 CRYBA2P53672 197 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms