RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 TRAV30A0A087WSZ9 112 aa12□□□□□ -0.49
CLTA-203ENST00000396603 TRAV14DV4A0A0A6YYC5 116 aa12□□□□□ -0.49
CLTA-203ENST00000396603 TRAV2A0A0B4J234 112 aa12□□□□□ -0.49
CLTA-203ENST00000396603 SCGB1D2O95969 90 aa12□□□□□ -0.49
CLTA-203ENST00000396603 IAPPP10997 89 aa12□□□□□ -0.49
CLTA-203ENST00000396603 PAFAH1B2P68402 229 aa12□□□□□ -0.49
CLTA-203ENST00000396603 RGS21Q2M5E4 152 aa12□□□□□ -0.49
CLTA-203ENST00000396603 FAM90A2PQ658T7 463 aa12□□□□□ -0.49
CLTA-203ENST00000396603 OR4X1Q8NH49 305 aa12□□□□□ -0.49
CLTA-203ENST00000396603 PHLDA1Q8WV24 401 aaPredicted RBP12□□□□□ -0.49
CLTA-203ENST00000396603 C2orf50Q96LR7 162 aa12□□□□□ -0.49
CLTA-203ENST00000396603 GINS3Q9BRX5 216 aa12□□□□□ -0.49
CLTA-203ENST00000396603 MAGT1Q9H0U3 335 aa12□□□□□ -0.49
CLTA-203ENST00000396603 STRAPQ9Y3F4 350 aaKnown RBP12□□□□□ -0.49
CLTA-203ENST00000396603 SSNA1O43805 119 aa11.99□□□□□ -0.49
CLTA-203ENST00000396603 DFFBO76075 338 aa11.99□□□□□ -0.49
CLTA-203ENST00000396603 RPL35AP18077 110 aaKnown RBP11.99□□□□□ -0.49
CLTA-203ENST00000396603 TAS2R30P59541 319 aa11.99□□□□□ -0.49
CLTA-203ENST00000396603 CYCSP99999 105 aaKnown RBP11.99□□□□□ -0.49
CLTA-203ENST00000396603 ZNF414Q96IQ9 312 aa11.99□□□□□ -0.49
CLTA-203ENST00000396603 PAIP2BQ9ULR5 123 aaKnown RBP11.99□□□□□ -0.49
CLTA-203ENST00000396603 DNAH10Q8IVF4 4471 aa11.98□□□□□ -0.49
CLTA-203ENST00000396603 L7N2F9 121 aa11.98□□□□□ -0.49
CLTA-203ENST00000396603 CCSO14618 274 aa11.98□□□□□ -0.49
CLTA-203ENST00000396603 SSSCA1O60232 199 aa11.98□□□□□ -0.49
CLTA-203ENST00000396603 CLN5O75503 358 aa11.98□□□□□ -0.49
CLTA-203ENST00000396603 PVALBP20472 110 aaPredicted RBP11.98□□□□□ -0.49
CLTA-203ENST00000396603 GPX4P36969 197 aaPredicted RBP11.98□□□□□ -0.49
CLTA-203ENST00000396603 POLR2GP62487 172 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLTA-203ENST00000396603 VAMP2P63027 116 aa11.98□□□□□ -0.49
CLTA-203ENST00000396603 SPANXN5Q5MJ07 72 aa11.98□□□□□ -0.49
CLTA-203ENST00000396603 SLC35E1Q96K37 410 aa11.98□□□□□ -0.49
CLTA-203ENST00000396603 SMIM8Q96KF7 97 aa11.98□□□□□ -0.49
CLTA-203ENST00000396603 RARRES2Q99969 163 aa11.98□□□□□ -0.49
CLTA-203ENST00000396603 FNDC4Q9H6D8 234 aaPredicted RBP11.98□□□□□ -0.49
CLTA-203ENST00000396603 PSENENQ9NZ42 101 aa11.98□□□□□ -0.49
CLTA-203ENST00000396603 ZNF207O43670 478 aaKnown RBP11.97□□□□□ -0.49
CLTA-203ENST00000396603 TSC22D2O75157 780 aa11.97□□□□□ -0.49
CLTA-203ENST00000396603 YIF1AO95070 293 aa11.97□□□□□ -0.49
CLTA-203ENST00000396603 IGHV3-48P01763 117 aa11.97□□□□□ -0.49
CLTA-203ENST00000396603 APRG1Q8IVJ8 170 aa11.97□□□□□ -0.49
CLTA-203ENST00000396603 VSIRQ9H7M9 311 aa11.97□□□□□ -0.49
CLTA-203ENST00000396603 IGHV3OR16-8A0A075B7F1 116 aa11.96□□□□□ -0.49
CLTA-203ENST00000396603 C7orf66A4D0T2 115 aa11.96□□□□□ -0.49
CLTA-203ENST00000396603 GOSR2O14653 212 aa11.96□□□□□ -0.49
CLTA-203ENST00000396603 TMEM50AO95807 157 aa11.96□□□□□ -0.49
CLTA-203ENST00000396603 MBPP02686 304 aaPredicted RBP11.96□□□□□ -0.49
CLTA-203ENST00000396603 FABP1P07148 127 aa11.96□□□□□ -0.49
CLTA-203ENST00000396603 RND2P52198 227 aa11.96□□□□□ -0.49
CLTA-203ENST00000396603 TMEM41BQ5BJD5 291 aa11.96□□□□□ -0.49
CLTA-203ENST00000396603 ZNF600Q6ZNG1 722 aa11.96□□□□□ -0.49
CLTA-203ENST00000396603 OR1S2Q8NGQ3 325 aa11.96□□□□□ -0.49
CLTA-203ENST00000396603 TMEM170AQ8WVE7 144 aa11.96□□□□□ -0.49
CLTA-203ENST00000396603 TMEM231Q9H6L2 316 aa11.96□□□□□ -0.49
CLTA-203ENST00000396603 RLN2P04090 185 aa11.95□□□□□ -0.5
CLTA-203ENST00000396603 PRSS54Q6PEW0 395 aa11.95□□□□□ -0.5
CLTA-203ENST00000396603 C11orf45Q8TAV5 145 aa11.95□□□□□ -0.5
CLTA-203ENST00000396603 ACY3Q96HD9 319 aa11.95□□□□□ -0.5
CLTA-203ENST00000396603 VPS13DQ5THJ4 4388 aa11.94□□□□□ -0.5
CLTA-203ENST00000396603 H3BP45 60 aa11.94□□□□□ -0.5
CLTA-203ENST00000396603 OR10J1P30954 320 aa11.94□□□□□ -0.5
CLTA-203ENST00000396603 S100A10P60903 97 aa11.94□□□□□ -0.5
CLTA-203ENST00000396603 TCF24Q7RTU0 167 aa11.94□□□□□ -0.5
CLTA-203ENST00000396603 OR11H2Q8NH07 326 aa11.94□□□□□ -0.5
CLTA-203ENST00000396603 NMES1Q9C002 83 aa11.94□□□□□ -0.5
CLTA-203ENST00000396603 HRH4Q9H3N8 390 aa11.94□□□□□ -0.5
CLTA-203ENST00000396603 RCL1Q9Y2P8 373 aaKnown RBP11.94□□□□□ -0.5
CLTA-203ENST00000396603 LSM5Q9Y4Y9 91 aaKnown RBP11.94□□□□□ -0.5
CLTA-203ENST00000396603 K7EPK0 472 aa11.93□□□□□ -0.5
CLTA-203ENST00000396603 PET100P0DJ07 73 aa11.93□□□□□ -0.5
CLTA-203ENST00000396603 TOMM20LQ6UXN7 152 aa11.93□□□□□ -0.5
CLTA-203ENST00000396603 OR10P1Q8NGE3 313 aa11.93□□□□□ -0.5
CLTA-203ENST00000396603 Q8WTZ3 238 aa11.93□□□□□ -0.5
CLTA-203ENST00000396603 NPIPB3Q92617 1050 aa11.93□□□□□ -0.5
CLTA-203ENST00000396603 HECTD4Q9Y4D8 3996 aa11.93□□□□□ -0.5
CLTA-203ENST00000396603 A0A1W2PS18 150 aa11.92□□□□□ -0.5
CLTA-203ENST00000396603 ZFP92A6NM28 416 aa11.92□□□□□ -0.5
CLTA-203ENST00000396603 C11orf94C9JXX5 98 aa11.92□□□□□ -0.5
CLTA-203ENST00000396603 CA1P00915 261 aaPredicted RBP11.92□□□□□ -0.5
CLTA-203ENST00000396603 IGLC1P0CG04 106 aa11.92□□□□□ -0.5
CLTA-203ENST00000396603 TFPI2P48307 235 aa11.92□□□□□ -0.5
CLTA-203ENST00000396603 BCAP31P51572 246 aa11.92□□□□□ -0.5
CLTA-203ENST00000396603 YPEL3P61236 119 aaPredicted RBP11.92□□□□□ -0.5
CLTA-203ENST00000396603 MLANAQ16655 118 aa11.92□□□□□ -0.5
CLTA-203ENST00000396603 RPP25LQ8N5L8 163 aaKnown RBP11.92□□□□□ -0.5
CLTA-203ENST00000396603 C2CD4CQ8TF44 421 aa11.92□□□□□ -0.5
CLTA-203ENST00000396603 NARS2Q96I59 477 aaKnown RBP11.92□□□□□ -0.5
CLTA-203ENST00000396603 MS4A6AQ9H2W1 248 aa11.92□□□□□ -0.5
CLTA-203ENST00000396603 ZFAND3Q9H8U3 227 aa11.92□□□□□ -0.5
CLTA-203ENST00000396603 MGAT4CQ9UBM8 478 aa11.92□□□□□ -0.5
CLTA-203ENST00000396603 ALG5Q9Y673 324 aa11.92□□□□□ -0.5
CLTA-203ENST00000396603 DNAH6Q9C0G6 4158 aa11.91□□□□□ -0.5
CLTA-203ENST00000396603 FNDC10F2Z333 226 aa11.91□□□□□ -0.5
CLTA-203ENST00000396603 DNASE2O00115 360 aaPredicted RBP11.91□□□□□ -0.5
CLTA-203ENST00000396603 CAV2P51636 162 aa11.91□□□□□ -0.5
CLTA-203ENST00000396603 RAB32Q13637 225 aa11.91□□□□□ -0.5
CLTA-203ENST00000396603 GAMTQ14353 236 aa11.91□□□□□ -0.5
CLTA-203ENST00000396603 ZNF124Q15973 351 aa11.91□□□□□ -0.5
CLTA-203ENST00000396603 OR8G2PQ6IF36 304 aa11.91□□□□□ -0.5
CLTA-203ENST00000396603 TMEM14EPQ6UXP3 125 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms