RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 MLST8Q9BVC4 326 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 FAM181BA6NEQ2 426 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 SLC25A5P05141 298 aaKnown RBP12.59□□□□□ -0.39
HOXA3-202ENST00000396352 VMA21Q3ZAQ7 101 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 COL5A1-AS1Q5SY13 56 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 LINC00322Q6ZN03 302 aaPredicted RBP12.59□□□□□ -0.39
HOXA3-202ENST00000396352 ATP5L2Q7Z4Y8 100 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 ATOH7Q8N100 152 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 SMIM12Q96EX1 92 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 ADGRG4Q8IZF6 3080 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 A0A0G2JNJ9 132 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 NDUFB3O43676 98 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 CRYABP02511 175 aaKnown RBP12.59□□□□□ -0.39
HOXA3-202ENST00000396352 THBDP07204 575 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 EBLN2Q6P2I7 272 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 CCL17Q92583 94 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 Q9UFV3 132 aa12.59□□□□□ -0.39
HOXA3-202ENST00000396352 CAMPP49913 170 aa12.58□□□□□ -0.4
HOXA3-202ENST00000396352 LRRC10Q5BKY1 277 aa12.58□□□□□ -0.4
HOXA3-202ENST00000396352 HCP5Q6MZN7 132 aa12.58□□□□□ -0.4
HOXA3-202ENST00000396352 STXBP6Q8NFX7 210 aa12.58□□□□□ -0.4
HOXA3-202ENST00000396352 PGPA6NDG6 321 aa12.58□□□□□ -0.4
HOXA3-202ENST00000396352 GP9P14770 177 aa12.58□□□□□ -0.4
HOXA3-202ENST00000396352 URB1-AS1Q96HZ7 61 aa12.58□□□□□ -0.4
HOXA3-202ENST00000396352 TRGV9Q99603 122 aa12.58□□□□□ -0.4
HOXA3-202ENST00000396352 AKAP13Q12802 2813 aa12.58□□□□□ -0.4
HOXA3-202ENST00000396352 C16orf97H3BN30 126 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 HSBP1O75506 76 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 ATMQ13315 3056 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 TMEM155Q4W5P6 130 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 PRR31Q5SQ13 230 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 Q6ZN92 141 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 OR8B3Q8NGG8 313 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 GPR82Q96P67 336 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 OR8B2Q96RD0 313 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 PRSS22Q9GZN4 317 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 CNOT1A5YKK6 2376 aaKnown RBP12.57□□□□□ -0.4
HOXA3-202ENST00000396352 MC5RP33032 325 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 TCF24Q7RTU0 167 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 C11orf42Q8N5U0 333 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 IGHV3-72A0A0B4J1Y9 119 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 M0R2Z0 102 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 NBEAP1P0C6P0 100 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 ETFRF1Q6IPR1 90 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 STPG4Q8N801 248 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 TMEM116Q8NCL8 245 aa12.57□□□□□ -0.4
HOXA3-202ENST00000396352 C2orf70A6NJV1 201 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 LTAP01374 205 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 IGHV1-8P0DP01 117 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 RNASEKQ6P5S7 137 aaKnown RBP12.56□□□□□ -0.4
HOXA3-202ENST00000396352 GTSF1Q8WW33 167 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 TXN2Q99757 166 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 RPP21Q9H633 154 aaKnown RBP12.56□□□□□ -0.4
HOXA3-202ENST00000396352 RPH3ALQ9UNE2 315 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 ROS1P08922 2347 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 TOMM40O96008 361 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 CA7P43166 264 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 LGALS7P47929 136 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 PMCHL1Q16048 86 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 C19orf71A6NCJ1 209 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 CNTFRP26992 372 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 HNRNPA3P51991 378 aaKnown RBP12.56□□□□□ -0.4
HOXA3-202ENST00000396352 ZFP30Q9Y2G7 519 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 LAMTOR2Q9Y2Q5 125 aa12.56□□□□□ -0.4
HOXA3-202ENST00000396352 ENSAO43768 121 aaKnown RBP12.55□□□□□ -0.4
HOXA3-202ENST00000396352 CRYGBP07316 175 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 FAM87AP0C7U9 286 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 LINC00614P0C842 121 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 APELAP0DMC3 54 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 HBBP68871 147 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 SPATA12Q7Z6I5 190 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 KIR3DL3Q8N743 410 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 KLHDC1Q8N7A1 406 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 OR2D3Q8NGH3 330 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 FMC1Q96HJ9 113 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 BTF3P20290 206 aaKnown RBP12.55□□□□□ -0.4
HOXA3-202ENST00000396352 FAM120AOSQ5T036 256 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 LEMD1Q68G75 181 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 TEX45Q8NA69 505 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 C5orf17Q8NAS9 161 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 KAAG1Q9UBP8 84 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 ZZEF1O43149 2961 aa12.55□□□□□ -0.4
HOXA3-202ENST00000396352 IGHV3-21A0A0B4J1V1 117 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 NDUFB8O95169 186 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 CT83Q5H943 113 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 ASCL5Q7RTU5 278 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 H3BTX0 84 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 TCRAP04437 139 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 SSX8Q7RTT4 187 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 Q9H3A6 140 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 ZNF492Q9P255 531 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 CEP250Q9BV73 2442 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 TSPOP30536 169 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 RPL27AP46776 148 aaKnown RBP12.54□□□□□ -0.4
HOXA3-202ENST00000396352 PLP1P60201 277 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 Q56UQ5 140 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 TMEM133Q9H2Q1 129 aa12.54□□□□□ -0.4
HOXA3-202ENST00000396352 GSX1Q9H4S2 264 aaPredicted RBP12.54□□□□□ -0.4
HOXA3-202ENST00000396352 DLX1P56177 255 aa12.53□□□□□ -0.4
HOXA3-202ENST00000396352 PRSS33Q8NF86 280 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms