RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 VWC2LB2RUY7 222 aa7.38□□□□□ -1.23
RAE1-202ENST00000395840 IGLV2-14P01704 120 aa7.38□□□□□ -1.23
RAE1-202ENST00000395840 CAMPP49913 170 aa7.38□□□□□ -1.23
RAE1-202ENST00000395840 WFDC2Q14508 124 aa7.38□□□□□ -1.23
RAE1-202ENST00000395840 LRRC29Q8WV35 223 aa7.38□□□□□ -1.23
RAE1-202ENST00000395840 IL1F10Q8WWZ1 152 aa7.38□□□□□ -1.23
RAE1-202ENST00000395840 H1FXQ92522 213 aaKnown RBP7.38□□□□□ -1.23
RAE1-202ENST00000395840 TMUB1Q9BVT8 246 aa7.38□□□□□ -1.23
RAE1-202ENST00000395840 A0A1W2PRE2 83 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 FCGR2BP31994 310 aaPredicted RBP7.37□□□□□ -1.23
RAE1-202ENST00000395840 PLP2Q04941 152 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 FAM27BQ5VT28 67 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 ZNF611Q8N823 705 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 ZNF418Q8TF45 676 aaPredicted RBP7.37□□□□□ -1.23
RAE1-202ENST00000395840 WIPF2Q8TF74 440 aaPredicted RBP7.37□□□□□ -1.23
RAE1-202ENST00000395840 WDR83OSQ9Y284 106 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 TIMM8BQ9Y5J9 83 aaPredicted RBP7.37□□□□□ -1.23
RAE1-202ENST00000395840 CNIH1O95406 144 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 BRI3O95415 125 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 CD3EP07766 207 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 FOXA3P55318 350 aaPredicted RBP7.37□□□□□ -1.23
RAE1-202ENST00000395840 MIC13Q5XKP0 118 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 C20orf204Q6ZNR8 217 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 SH2D6Q7Z4S9 175 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 WDR31Q8NA23 367 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 LIN7CQ9NUP9 197 aaKnown RBP7.37□□□□□ -1.23
RAE1-202ENST00000395840 OR1A1Q9P1Q5 309 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 USF3Q68DE3 2245 aa7.37□□□□□ -1.23
RAE1-202ENST00000395840 PCNX1Q96RV3 2341 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 KBTBD11-OT1A0A1B0GTJ5 212 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 LRRC30A6NM36 301 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 FOXH1O75593 365 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 CLEC3BP05452 202 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 THBDP07204 575 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 FGF6P10767 208 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 RASL11AQ6T310 242 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 TMEM116Q8NCL8 245 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 OR52E5Q8NH55 327 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 HS3ST6Q96QI5 342 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 FAM110AQ9BQ89 295 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 TRAPPC2LQ9UL33 140 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 RELNP78509 3460 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 USP9YO00507 2555 aaPredicted RBP7.36□□□□□ -1.23
RAE1-202ENST00000395840 OR2J3O76001 311 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 CD24P25063 80 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 G6PCP35575 357 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 ODF1Q14990 250 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 ETDBQ3ZM63 59 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 PDLIM3Q53GG5 364 aaPredicted RBP7.36□□□□□ -1.23
RAE1-202ENST00000395840 NHLRC2Q8NBF2 726 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 PIGCQ92535 297 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 SPTSSAQ969W0 71 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 VGLL1Q99990 258 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 HIF1ANQ9NWT6 349 aa7.36□□□□□ -1.23
RAE1-202ENST00000395840 A0A096LPE4 126 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 A0A1W2PPZ6 126 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 IGKV3-15P01624 115 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 B4GALT1P15291 398 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 BCL3P20749 454 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 TCTAP57738 103 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 FAM162BQ5T6X4 162 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 NUP35Q8NFH5 326 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 ARPC1AQ92747 370 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 HINT2Q9BX68 163 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 C1QTNF5Q9BXJ0 243 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 HSPB8Q9UJY1 196 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 ERG28Q9UKR5 140 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 A0A1B0GW15 77 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 IGLV1-44P01699 117 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 IGLV2-8P01709 118 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 IGHV3-7P01780 117 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 SPINK8P0C7L1 97 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 OPRK1P41145 380 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 INSL3P51460 131 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 FOXG1P55316 489 aaPredicted RBP7.35□□□□□ -1.23
RAE1-202ENST00000395840 LINC01545Q5VT33 79 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 OR4A16Q8NH70 328 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 CHCHD1Q96BP2 118 aaKnown RBP7.35□□□□□ -1.23
RAE1-202ENST00000395840 GALMQ96C23 342 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 PLPPR2Q96GM1 343 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 ZNF355PQ9NSJ1 428 aa7.35□□□□□ -1.23
RAE1-202ENST00000395840 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.34□□□□□ -1.23
RAE1-202ENST00000395840 DEFB108AA8MXU0 73 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 B5MCH6 92 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 M0R1B8 84 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 LIPFP07098 398 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 CD40P25942 277 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 TM4SF20Q53R12 229 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 SPATA46Q5T0L3 261 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 C8orf86Q6ZUL3 223 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 TEX45Q8NA69 505 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 SSMEM1Q8WWF3 244 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 NABP1Q96AH0 204 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 ZNF837Q96EG3 531 aaPredicted RBP7.34□□□□□ -1.23
RAE1-202ENST00000395840 GPR82Q96P67 336 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.34□□□□□ -1.23
RAE1-202ENST00000395840 SPTBN1Q01082 2364 aaKnown RBP7.34□□□□□ -1.23
RAE1-202ENST00000395840 F8W1H4 67 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 OR9G9P0C7N8 305 aa7.34□□□□□ -1.23
RAE1-202ENST00000395840 SMIM13P0DJ93 91 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms