RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 FAM231AP0DMU4 169 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 FAM231CP0DMU5 169 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 NPY1RP25929 384 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 NKX2-1P43699 371 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 TMEM268Q5VZI3 342 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 SIGLEC15Q6ZMC9 328 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 NPIPB3Q92617 1050 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 CLUHP3Q96NS8 147 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 DNAH2Q9P225 4427 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 RABL2AQ9UBK7 228 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 PFDN2Q9UHV9 154 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 RABL2BQ9UNT1 228 aa12.58□□□□□ -0.4
SNRPA1-202ENST00000394082 TMEM189A5PLL7 270 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 SMIM9A6NGZ8 99 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 CTDSPLO15194 276 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 NXPH3O95157 252 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 HLA-DRB4P13762 266 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 ZNF705AQ6ZN79 300 aaPredicted RBP12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 POM121L12Q8N7R1 296 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 DYNC2LI1Q8TCX1 351 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 SMIM4Q8WVI0 70 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 PRRT1Q99946 306 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 MIXL1Q9H2W2 232 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 CELA1Q9UNI1 258 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 HLA-DRB4X5D2U9 266 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 PCLOQ9Y6V0 5065 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 PKHD1P08F94 4074 aa12.57□□□□□ -0.4
SNRPA1-202ENST00000394082 ZNF705FA8MVS1 300 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 ZNF705DP0CH99 300 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 ZNF705BP0CI00 300 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 AKAIN1P0CW23 69 aa12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 SULT1A3P0DMM9 295 aa12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 SULT1A4P0DMN0 295 aa12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 PSG1P11464 419 aa12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 OR8G2PQ6IF36 304 aa12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 OR51G1Q8NGK1 321 aa12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 FAM210BQ96KR6 192 aa12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 NDUFAF3Q9BU61 184 aa12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 KCNIP3Q9Y2W7 256 aa12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 DNAH17Q9UFH2 4485 aa12.56□□□□□ -0.4
SNRPA1-202ENST00000394082 C1orf194Q5T5A4 169 aa12.55□□□□□ -0.4
SNRPA1-202ENST00000394082 FAAP20Q6NZ36 180 aa12.55□□□□□ -0.4
SNRPA1-202ENST00000394082 XCL2Q9UBD3 114 aa12.55□□□□□ -0.4
SNRPA1-202ENST00000394082 HSPB7Q9UBY9 170 aa12.55□□□□□ -0.4
SNRPA1-202ENST00000394082 A0A0B4J2A0 478 aa12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 PIGBOS1A0A0B4J2F0 54 aa12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 TEX48A0A1B0GUV7 120 aa12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 A0A1B0GVY2 172 aa12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 CTDSP2O14595 271 aa12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 GPX4P36969 197 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 CCR6P51684 374 aa12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 KLF9Q13886 244 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 SPATA31B1PQ5VZV4 182 aa12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 OR4C16Q8NGL9 310 aa12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 RNF125Q96EQ8 232 aa12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 ACY3Q96HD9 319 aa12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 SCGB3A2Q96PL1 93 aa12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 SHPKQ9UHJ6 478 aa12.54□□□□□ -0.4
SNRPA1-202ENST00000394082 IFNA10P01566 189 aa12.53□□□□□ -0.4
SNRPA1-202ENST00000394082 SPART-AS1P0CW21 52 aa12.53□□□□□ -0.4
SNRPA1-202ENST00000394082 DIRAS2Q96HU8 199 aa12.53□□□□□ -0.4
SNRPA1-202ENST00000394082 ID1P41134 155 aa12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 PSMB3P49720 205 aa12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 SMCO1Q147U7 214 aa12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 LGALS9BQ3B8N2 356 aa12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 SAMD13Q5VXD3 122 aa12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 FOXI2Q6ZQN5 318 aa12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 LGI3Q8N145 548 aa12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 OR51S1Q8NGJ8 323 aa12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 MCFD2Q8NI22 146 aa12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 DTD1Q8TEA8 209 aa12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 SAV1Q9H4B6 383 aaPredicted RBP12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 RSL24D1Q9UHA3 163 aaKnown RBP12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 SCP2D1Q9UJQ7 156 aa12.52□□□□□ -0.41
SNRPA1-202ENST00000394082 ANKRD20A5PA0PJZ0 165 aa12.51□□□□□ -0.41
SNRPA1-202ENST00000394082 FABP1P07148 127 aa12.51□□□□□ -0.41
SNRPA1-202ENST00000394082 SUPT4H1P63272 117 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-202ENST00000394082 SRPXP78539 464 aa12.51□□□□□ -0.41
SNRPA1-202ENST00000394082 IL18Q14116 193 aa12.51□□□□□ -0.41
SNRPA1-202ENST00000394082 SLIRPQ9GZT3 109 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-202ENST00000394082 RFNGQ9Y644 331 aa12.51□□□□□ -0.41
SNRPA1-202ENST00000394082 SOCS3O14543 225 aa12.5□□□□□ -0.41
SNRPA1-202ENST00000394082 MED14OSP0DP75 135 aa12.5□□□□□ -0.41
SNRPA1-202ENST00000394082 GAMTQ14353 236 aa12.5□□□□□ -0.41
SNRPA1-202ENST00000394082 OXA1LQ15070 435 aa12.5□□□□□ -0.41
SNRPA1-202ENST00000394082 ZNF79Q15937 498 aa12.5□□□□□ -0.41
SNRPA1-202ENST00000394082 ZNF767PQ75MW2 155 aa12.5□□□□□ -0.41
SNRPA1-202ENST00000394082 ZNF709Q8N972 641 aa12.5□□□□□ -0.41
SNRPA1-202ENST00000394082 IGKV1D-37A0A075B6S9 117 aa12.49□□□□□ -0.41
SNRPA1-202ENST00000394082 ZFP92A6NM28 416 aa12.49□□□□□ -0.41
SNRPA1-202ENST00000394082 SNRPGP15A8MWD9 76 aa12.49□□□□□ -0.41
SNRPA1-202ENST00000394082 ZNF701M0R085 212 aaPredicted RBP12.49□□□□□ -0.41
SNRPA1-202ENST00000394082 ISLRO14498 428 aa12.49□□□□□ -0.41
SNRPA1-202ENST00000394082 PAX9P55771 341 aa12.49□□□□□ -0.41
SNRPA1-202ENST00000394082 GDF5OSQ5U4N7 250 aa12.49□□□□□ -0.41
SNRPA1-202ENST00000394082 WDR12Q9GZL7 423 aaKnown RBP12.49□□□□□ -0.41
SNRPA1-202ENST00000394082 RBM38Q9H0Z9 239 aaKnown RBP12.49□□□□□ -0.41
SNRPA1-202ENST00000394082 RBKSQ9H477 322 aa12.49□□□□□ -0.41
SNRPA1-202ENST00000394082 DKK2Q9UBU2 259 aa12.49□□□□□ -0.41
SNRPA1-202ENST00000394082 PKD1P98161 4303 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms