RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 ZNF329Q86UD4 541 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 DYNAPQ8N1N2 210 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 Q8N6K4 173 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 OR1L6Q8NGR2 347 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 OSTCQ9NRP0 149 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 TACC2O95359 2948 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 OVOL3O00110 214 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 SLC17A3O00476 420 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 ISLRO14498 428 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 IGKV1-17P01599 117 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 CD24P25063 80 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 ERVFC1-1P60608 527 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 YPEL3P61236 119 aaPredicted RBP7.17□□□□□ -1.26
TDP1-202ENST00000393452 OR5I1Q13606 314 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 FXYD3Q14802 87 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 PYY3Q5JQD4 70 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 GSX1Q9H4S2 264 aaPredicted RBP7.17□□□□□ -1.26
TDP1-202ENST00000393452 NIT2Q9NQR4 276 aa7.17□□□□□ -1.26
TDP1-202ENST00000393452 IGHV2-70DA0A0C4DH43 119 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 PSG1P11464 419 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 GP9P14770 177 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 ZNF562Q6V9R5 426 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 HIST1H2BLQ99880 126 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 A0A1W2PRD5 423 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 A0A1W2PRF3 423 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 A0A1W2PRM7 423 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 PEX7O00628 323 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 LMO4P61968 165 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 RPEL1Q2QD12 228 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 PDZD11Q5EBL8 140 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 ZNF600Q6ZNG1 722 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 OR10D4PQ8NGN7 298 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 IGFBPL1Q8WX77 278 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 TRAPPC1Q9Y5R8 145 aa7.16□□□□□ -1.26
TDP1-202ENST00000393452 CACNA1BQ00975 2339 aa7.15□□□□□ -1.26
TDP1-202ENST00000393452 XKRY2A2RUG3 117 aa7.15□□□□□ -1.26
TDP1-202ENST00000393452 NPIPB5A8MRT5 1133 aa7.15□□□□□ -1.26
TDP1-202ENST00000393452 NBEAP1P0C6P0 100 aa7.15□□□□□ -1.26
TDP1-202ENST00000393452 CNN1P51911 297 aaKnown RBP7.15□□□□□ -1.26
TDP1-202ENST00000393452 CX3CL1P78423 397 aa7.15□□□□□ -1.26
TDP1-202ENST00000393452 HES1Q14469 280 aa7.15□□□□□ -1.26
TDP1-202ENST00000393452 ASPHD1Q5U4P2 390 aa7.15□□□□□ -1.26
TDP1-202ENST00000393452 AJUBAQ96IF1 538 aa7.15□□□□□ -1.26
TDP1-202ENST00000393452 LINC00479Q96M42 142 aa7.15□□□□□ -1.26
TDP1-202ENST00000393452 RASL11BQ9BPW5 248 aa7.15□□□□□ -1.26
TDP1-202ENST00000393452 MRPL27Q9P0M9 148 aaKnown RBP7.15□□□□□ -1.26
TDP1-202ENST00000393452 HIGD1AQ9Y241 93 aa7.15□□□□□ -1.26
TDP1-202ENST00000393452 TBL2Q9Y4P3 447 aaKnown RBP7.15□□□□□ -1.26
TDP1-202ENST00000393452 EPG5Q9HCE0 2579 aa7.15□□□□□ -1.27
TDP1-202ENST00000393452 FABP4P15090 132 aa7.15□□□□□ -1.27
TDP1-202ENST00000393452 RANP62826 216 aaKnown RBP7.15□□□□□ -1.27
TDP1-202ENST00000393452 FANCD2OSQ96PS1 177 aa7.15□□□□□ -1.27
TDP1-202ENST00000393452 TBX15Q96SF7 602 aa7.15□□□□□ -1.27
TDP1-202ENST00000393452 FAM103A1Q9BTL3 118 aaKnown RBP7.15□□□□□ -1.27
TDP1-202ENST00000393452 BPESC1Q9GZL8 116 aa7.15□□□□□ -1.27
TDP1-202ENST00000393452 RNASE7Q9H1E1 156 aaKnown RBP7.15□□□□□ -1.27
TDP1-202ENST00000393452 TMEM14CQ9P0S9 112 aa7.15□□□□□ -1.27
TDP1-202ENST00000393452 EPDR1Q9UM22 224 aa7.15□□□□□ -1.27
TDP1-202ENST00000393452 KLF12Q9Y4X4 402 aa7.15□□□□□ -1.27
TDP1-202ENST00000393452 SPTAN1Q13813 2472 aaKnown RBP7.14□□□□□ -1.27
TDP1-202ENST00000393452 IGLV11-55A0A075B6I3 123 aa7.14□□□□□ -1.27
TDP1-202ENST00000393452 RD3LP0DJH9 198 aa7.14□□□□□ -1.27
TDP1-202ENST00000393452 UBE2E1P51965 193 aa7.14□□□□□ -1.27
TDP1-202ENST00000393452 NDPQ00604 133 aa7.14□□□□□ -1.27
TDP1-202ENST00000393452 TMEM183BQ1AE95 376 aa7.14□□□□□ -1.27
TDP1-202ENST00000393452 IBA57Q5T440 356 aaKnown RBP7.14□□□□□ -1.27
TDP1-202ENST00000393452 TTC9CQ8N5M4 171 aa7.14□□□□□ -1.27
TDP1-202ENST00000393452 ARPC1AQ92747 370 aa7.14□□□□□ -1.27
TDP1-202ENST00000393452 ZNF48Q96MX3 618 aaPredicted RBP7.14□□□□□ -1.27
TDP1-202ENST00000393452 SLC25A39Q9BZJ4 359 aaPredicted RBP7.14□□□□□ -1.27
TDP1-202ENST00000393452 TOX4O94842 621 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 AMBPP02760 352 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 HIST1H1BP16401 226 aaKnown RBP7.13□□□□□ -1.27
TDP1-202ENST00000393452 LYZP61626 148 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 DNLZQ5SXM8 178 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 FAM231DQ6ZW35 169 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 SMIM12Q96EX1 92 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 PACRGQ96M98 296 aaPredicted RBP7.13□□□□□ -1.27
TDP1-202ENST00000393452 RBM14Q96PK6 669 aaKnown RBP7.13□□□□□ -1.27
TDP1-202ENST00000393452 POLR3KQ9Y2Y1 108 aaPredicted RBP7.13□□□□□ -1.27
TDP1-202ENST00000393452 TRBV9A0A0B4J1U6 114 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 SMIM27A0A1W2PRY6 76 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 PGPA6NDG6 321 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 TOMM40O96008 361 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 LEMD1Q68G75 181 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 BAGE2Q86Y30 109 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 C5orf17Q8NAS9 161 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 BLNKQ8WV28 456 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 C7orf69Q9H7B7 122 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 ZFYVE26Q68DK2 2539 aa7.13□□□□□ -1.27
TDP1-202ENST00000393452 TRAV34A0A0B4J273 112 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 NCBP2LA6PVI3 153 aaKnown RBP7.12□□□□□ -1.27
TDP1-202ENST00000393452 GOSR1O95249 250 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 SLC25A5P05141 298 aaKnown RBP7.12□□□□□ -1.27
TDP1-202ENST00000393452 SNRPCP09234 159 aaKnown RBP7.12□□□□□ -1.27
TDP1-202ENST00000393452 MGST1P10620 155 aaKnown RBP7.12□□□□□ -1.27
TDP1-202ENST00000393452 TMEM11P17152 192 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 CBLN1P23435 193 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 ADMP35318 185 aa7.12□□□□□ -1.27
TDP1-202ENST00000393452 GNG5P63218 68 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms