RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 LGI3Q8N145 548 aa12.01□□□□□ -0.49
PTPRK-208ENST00000392449 CSNK1G2-AS1Q8NCQ2 148 aa12.01□□□□□ -0.49
PTPRK-208ENST00000392449 C2CD4CQ8TF44 421 aa12.01□□□□□ -0.49
PTPRK-208ENST00000392449 RSL24D1Q9UHA3 163 aaKnown RBP12.01□□□□□ -0.49
PTPRK-208ENST00000392449 SHPKQ9UHJ6 478 aa12.01□□□□□ -0.49
PTPRK-208ENST00000392449 FABP12A6NFH5 140 aa12□□□□□ -0.49
PTPRK-208ENST00000392449 ZNF705EA8MWA4 302 aaPredicted RBP12□□□□□ -0.49
PTPRK-208ENST00000392449 IGLL5B9A064 214 aa12□□□□□ -0.49
PTPRK-208ENST00000392449 BUB3O43684 328 aa12□□□□□ -0.49
PTPRK-208ENST00000392449 EIF2B2P49770 351 aaKnown RBP12□□□□□ -0.49
PTPRK-208ENST00000392449 CCR6P51684 374 aa12□□□□□ -0.49
PTPRK-208ENST00000392449 SIGLEC15Q6ZMC9 328 aa12□□□□□ -0.49
PTPRK-208ENST00000392449 MCFD2Q8NI22 146 aa12□□□□□ -0.49
PTPRK-208ENST00000392449 PBDC1Q9BVG4 233 aa12□□□□□ -0.49
PTPRK-208ENST00000392449 IGKV1D-37A0A075B6S9 117 aa11.99□□□□□ -0.49
PTPRK-208ENST00000392449 HLA-DMBP28068 263 aa11.99□□□□□ -0.49
PTPRK-208ENST00000392449 ZNF90Q03938 601 aa11.99□□□□□ -0.49
PTPRK-208ENST00000392449 Q6ZTC4 211 aa11.99□□□□□ -0.49
PTPRK-208ENST00000392449 ZNF767PQ75MW2 155 aa11.99□□□□□ -0.49
PTPRK-208ENST00000392449 TMED4Q7Z7H5 227 aa11.99□□□□□ -0.49
PTPRK-208ENST00000392449 NRN1Q9NPD7 142 aa11.99□□□□□ -0.49
PTPRK-208ENST00000392449 RABL2AQ9UBK7 228 aaPredicted RBP11.99□□□□□ -0.49
PTPRK-208ENST00000392449 CELA1Q9UNI1 258 aa11.99□□□□□ -0.49
PTPRK-208ENST00000392449 RABL2BQ9UNT1 228 aa11.99□□□□□ -0.49
PTPRK-208ENST00000392449 U3KQ87 197 aa11.99□□□□□ -0.49
PTPRK-208ENST00000392449 DNAH6Q9C0G6 4158 aa11.98□□□□□ -0.49
PTPRK-208ENST00000392449 IAPPP10997 89 aa11.98□□□□□ -0.49
PTPRK-208ENST00000392449 MIFP14174 115 aa11.98□□□□□ -0.49
PTPRK-208ENST00000392449 KLF9Q13886 244 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-208ENST00000392449 GAMTQ14353 236 aa11.98□□□□□ -0.49
PTPRK-208ENST00000392449 OR1S1Q8NH92 325 aa11.98□□□□□ -0.49
PTPRK-208ENST00000392449 TRIM63Q969Q1 353 aa11.98□□□□□ -0.49
PTPRK-208ENST00000392449 RNF125Q96EQ8 232 aa11.98□□□□□ -0.49
PTPRK-208ENST00000392449 SCGB3A2Q96PL1 93 aa11.98□□□□□ -0.49
PTPRK-208ENST00000392449 BCL7BQ9BQE9 202 aa11.98□□□□□ -0.49
PTPRK-208ENST00000392449 XCL2Q9UBD3 114 aa11.98□□□□□ -0.49
PTPRK-208ENST00000392449 TBC1D24Q9ULP9 559 aa11.98□□□□□ -0.49
PTPRK-208ENST00000392449 APLNQ9ULZ1 77 aa11.98□□□□□ -0.49
PTPRK-208ENST00000392449 AP2S1P53680 142 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-208ENST00000392449 SNRPD3P62318 126 aaKnown RBP11.97□□□□□ -0.49
PTPRK-208ENST00000392449 TMEM41BQ5BJD5 291 aa11.97□□□□□ -0.49
PTPRK-208ENST00000392449 GDF5OSQ5U4N7 250 aa11.97□□□□□ -0.49
PTPRK-208ENST00000392449 NOXA1Q86UR1 476 aa11.97□□□□□ -0.49
PTPRK-208ENST00000392449 WDR12Q9GZL7 423 aaKnown RBP11.97□□□□□ -0.49
PTPRK-208ENST00000392449 HRH4Q9H3N8 390 aa11.97□□□□□ -0.49
PTPRK-208ENST00000392449 ZFP92A6NM28 416 aa11.96□□□□□ -0.49
PTPRK-208ENST00000392449 H3BMM0 161 aa11.96□□□□□ -0.49
PTPRK-208ENST00000392449 NOL3O60936 208 aaKnown RBP11.96□□□□□ -0.49
PTPRK-208ENST00000392449 IGKV3-20P01619 116 aa11.96□□□□□ -0.49
PTPRK-208ENST00000392449 FXYD7P58549 80 aa11.96□□□□□ -0.49
PTPRK-208ENST00000392449 OR2F1Q13607 317 aa11.96□□□□□ -0.49
PTPRK-208ENST00000392449 PYDC2Q56P42 97 aa11.96□□□□□ -0.49
PTPRK-208ENST00000392449 PITX3O75364 302 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 ANXA3P12429 323 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 VAMP1P23763 118 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 LYZP61626 148 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 SCRT1Q9BWW7 348 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 CACFD1Q9UGQ2 172 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 PAIP2BQ9ULR5 123 aaKnown RBP11.95□□□□□ -0.5
PTPRK-208ENST00000392449 V9GYH0 126 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 LCE2BO14633 110 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 SRPXP78539 464 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 ZNF79Q15937 498 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 SLC35E1Q96K37 410 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 LINC00052Q96N35 136 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 MAGT1Q9H0U3 335 aa11.95□□□□□ -0.5
PTPRK-208ENST00000392449 HECTD4Q9Y4D8 3996 aa11.94□□□□□ -0.5
PTPRK-208ENST00000392449 IGKV1OR2-108A0A075B7D4 117 aa11.94□□□□□ -0.5
PTPRK-208ENST00000392449 C11orf94C9JXX5 98 aa11.94□□□□□ -0.5
PTPRK-208ENST00000392449 HLA-DRB4P13762 266 aa11.94□□□□□ -0.5
PTPRK-208ENST00000392449 TOMM5Q8N4H5 51 aa11.94□□□□□ -0.5
PTPRK-208ENST00000392449 HLA-DRB4X5D2U9 266 aa11.94□□□□□ -0.5
PTPRK-208ENST00000392449 IGHV4-4A0A075B6R2 117 aa11.93□□□□□ -0.5
PTPRK-208ENST00000392449 GPX4P36969 197 aaPredicted RBP11.93□□□□□ -0.5
PTPRK-208ENST00000392449 C12orf74Q32Q52 190 aa11.93□□□□□ -0.5
PTPRK-208ENST00000392449 TMEM128Q5BJH2 165 aa11.93□□□□□ -0.5
PTPRK-208ENST00000392449 TRAV10A0A0B4J240 114 aa11.92□□□□□ -0.5
PTPRK-208ENST00000392449 SOCS3O14543 225 aa11.92□□□□□ -0.5
PTPRK-208ENST00000392449 FAUP35544 74 aaKnown RBP11.92□□□□□ -0.5
PTPRK-208ENST00000392449 NKX2-1P43699 371 aaPredicted RBP11.92□□□□□ -0.5
PTPRK-208ENST00000392449 PPP1R1AQ13522 171 aa11.92□□□□□ -0.5
PTPRK-208ENST00000392449 OR8G2PQ6IF36 304 aa11.92□□□□□ -0.5
PTPRK-208ENST00000392449 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
PTPRK-208ENST00000392449 F6UB75 175 aa11.91□□□□□ -0.5
PTPRK-208ENST00000392449 HOXB5P09067 269 aa11.91□□□□□ -0.5
PTPRK-208ENST00000392449 NUTF2P61970 127 aaKnown RBP11.91□□□□□ -0.5
PTPRK-208ENST00000392449 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
PTPRK-208ENST00000392449 DUXBA0A1W2PPF3 345 aa11.9□□□□□ -0.5
PTPRK-208ENST00000392449 H3BP45 60 aa11.9□□□□□ -0.5
PTPRK-208ENST00000392449 WRBO00258 174 aa11.9□□□□□ -0.5
PTPRK-208ENST00000392449 EMP1P54849 157 aa11.9□□□□□ -0.5
PTPRK-208ENST00000392449 TCTAP57738 103 aa11.9□□□□□ -0.5
PTPRK-208ENST00000392449 AP3S2P59780 193 aa11.9□□□□□ -0.5
PTPRK-208ENST00000392449 LRTM2Q8N967 370 aa11.9□□□□□ -0.5
PTPRK-208ENST00000392449 PPP1R14BQ96C90 147 aa11.9□□□□□ -0.5
PTPRK-208ENST00000392449 TRGV9Q99603 122 aa11.9□□□□□ -0.5
PTPRK-208ENST00000392449 C1QTNF4Q9BXJ3 329 aa11.9□□□□□ -0.5
PTPRK-208ENST00000392449 SLC35B3Q9H1N7 401 aa11.9□□□□□ -0.5
PTPRK-208ENST00000392449 SAV1Q9H4B6 383 aaPredicted RBP11.9□□□□□ -0.5
PTPRK-208ENST00000392449 DEFB131BA0A096LNP1 70 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms