RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 GRB2P62993 217 aaKnown RBP1.78□□□□□ -2.12
PTPRC-205ENST00000391970 PAFAH1B2P68402 229 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 SSBP1Q04837 148 aaKnown RBP1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TMEM267Q0VDI3 215 aaPredicted RBP1.78□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF235Q14590 738 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TDRG1Q3Y452 100 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 ACTL10Q5JWF8 245 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 SPANXN3Q5MJ09 141 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TEX36Q5VZQ5 186 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 GLT8D1Q68CQ7 371 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 HBMQ6B0K9 141 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 OR2T5Q6IEZ7 315 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 OR2T2Q6IF00 324 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 SBSNQ6UWP8 590 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 GTF2H5Q6ZYL4 71 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 OSR2Q8N2R0 312 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 FAM24BQ8N5W8 94 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF645Q8N7E2 425 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TCTEX1D1Q8N7M0 179 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF615Q8N8J6 731 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 ZIC4Q8N9L1 334 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 OR2T29Q8NH02 315 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 MYOZ3Q8TDC0 251 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TNFAIP8L1Q8WVP5 186 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TSLPQ969D9 159 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 PPCDCQ96CD2 204 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 SLAMF6Q96DU3 332 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 DIRAS2Q96HU8 199 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 FAM19A4Q96LR4 140 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 KCTD7Q96MP8 289 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 LINC01600Q96MT4 127 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 IP6K3Q96PC2 410 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 AQP10Q96PS8 301 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 DERL3Q96Q80 235 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TBL1YQ9BQ87 522 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TSSK6Q9BXA6 273 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 OR51I2Q9H344 312 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 PRORYQ9H606 182 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 REEP1Q9H902 201 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 PRTFDC1Q9NRG1 225 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 CA10Q9NS85 328 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TMEM106BQ9NUM4 274 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 ASF1BQ9NVP2 202 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TXNL4BQ9NX01 149 aaKnown RBP1.78□□□□□ -2.12
PTPRC-205ENST00000391970 BET1LQ9NYM9 111 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 OR5V1Q9UGF6 321 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 SS18L2Q9UHA2 77 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 LINC00312Q9Y6C7 94 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 NUP205Q92621 2012 aa1.78□□□□□ -2.13
PTPRC-205ENST00000391970 TRAV9-1A0A075B6T8 112 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 A0A0A6YYD5 115 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 MEIS3P1A6NDR6 274 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF850A8MQ14 1090 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 C9JQL5 133 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 F5H5P2 479 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 F5H5T6 163 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 J3KT08 172 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 J3QLI3 93 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 OVOL1O14753 267 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 CRXO43186 299 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-205ENST00000391970 GNG7O60262 68 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 HYPMO75409 117 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 CNMDO75829 334 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 APOA2P02652 100 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 CXCL1P09341 107 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 ORM2P19652 201 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 RPS4Y1P22090 263 aaKnown RBP1.77□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF93P35789 620 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-205ENST00000391970 UBE2E1P51965 193 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 SNRPGP62308 76 aaKnown RBP1.77□□□□□ -2.13
PTPRC-205ENST00000391970 LSM3P62310 102 aaKnown RBP1.77□□□□□ -2.13
PTPRC-205ENST00000391970 SEC11AP67812 179 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 FAM53BQ14153 422 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 PMVKQ15126 192 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 CLEC12BQ2HXU8 276 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 TBC1D28Q2M2D7 210 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 ATP6AP1LQ52LC2 224 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 PYDC2Q56P42 97 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 CPTPQ5TA50 214 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 UNQ5815/PRO19632Q6UWF5 114 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 AMTNQ6UX39 209 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 Q6ZS49 121 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 OR8I2Q8N0Y5 310 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 KRTCAP2Q8N6L1 136 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 TMEM229BQ8NBD8 167 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 OR13G1Q8NGZ3 307 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 OR8S1Q8NH09 359 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 OR13C6PQ8NH95 151 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 BLNKQ8WV28 456 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 UBE2E2Q96LR5 201 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 LINC00477Q96M19 166 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF75AQ96N20 296 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF649Q9BS31 505 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 RTBDNQ9BSG5 229 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-205ENST00000391970 VAMP8Q9BV40 100 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 DPY30Q9C005 99 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 SLC35B3Q9H1N7 401 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 ZNF586Q9NXT0 402 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 FKBP11Q9NYL4 201 aa1.77□□□□□ -2.13
PTPRC-205ENST00000391970 IDI2-AS1Q9NZ38 188 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms