RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 PYYP10082 97 aa14.32□□□□□ -0.12
SQSTM1-202ENST00000389805 FAM120AOSQ5T036 256 aa14.32□□□□□ -0.12
SQSTM1-202ENST00000389805 ST20Q9HBF5 79 aa14.32□□□□□ -0.12
SQSTM1-202ENST00000389805 SLC25A10Q9UBX3 287 aaPredicted RBP14.32□□□□□ -0.12
SQSTM1-202ENST00000389805 ZNF137PP52743 207 aa14.31□□□□□ -0.12
SQSTM1-202ENST00000389805 UBE2L3P68036 154 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-202ENST00000389805 ABHD17AQ96GS6 310 aa14.31□□□□□ -0.12
SQSTM1-202ENST00000389805 LEPROTL1O95214 131 aa14.31□□□□□ -0.12
SQSTM1-202ENST00000389805 UQCRFS1P47985 274 aa14.31□□□□□ -0.12
SQSTM1-202ENST00000389805 FAM57AQ8TBR7 257 aa14.31□□□□□ -0.12
SQSTM1-202ENST00000389805 IGHV1-24A0A0C4DH33 117 aa14.31□□□□□ -0.12
SQSTM1-202ENST00000389805 KBTBD11-OT1A0A1B0GTJ5 212 aa14.31□□□□□ -0.12
SQSTM1-202ENST00000389805 HSBP1L1C9JCN9 74 aa14.31□□□□□ -0.12
SQSTM1-202ENST00000389805 TCTAP57738 103 aa14.31□□□□□ -0.12
SQSTM1-202ENST00000389805 KLF5Q13887 457 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-202ENST00000389805 A0A0G2JNJ9 132 aa14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 PPIAL4DF5H284 164 aa14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 TMEM11P17152 192 aa14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 GNG5P63218 68 aa14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 DDB2Q92466 427 aa14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 GAFA1Q96PS6 74 aa14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 Q9UFV3 132 aa14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 AMMECR1Q9Y4X0 333 aaPredicted RBP14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 RAI1Q7Z5J4 1906 aaPredicted RBP14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 C15orf61A6NNL5 157 aa14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 C12orf54Q6X4T0 127 aa14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 LHFPL4Q7Z7J7 247 aa14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 COMMD5Q9GZQ3 224 aa14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 FNDC4Q9H6D8 234 aaPredicted RBP14.3□□□□□ -0.12
SQSTM1-202ENST00000389805 CLEC2AQ6UVW9 174 aa14.29□□□□□ -0.12
SQSTM1-202ENST00000389805 MBD6Q96DN6 1003 aa14.29□□□□□ -0.12
SQSTM1-202ENST00000389805 IGHV3-48P01763 117 aa14.29□□□□□ -0.12
SQSTM1-202ENST00000389805 APOA2P02652 100 aa14.29□□□□□ -0.12
SQSTM1-202ENST00000389805 WIPF2Q8TF74 440 aaPredicted RBP14.29□□□□□ -0.12
SQSTM1-202ENST00000389805 FAM222BQ8WU58 562 aa14.29□□□□□ -0.12
SQSTM1-202ENST00000389805 GRAMD2BQ96HH9 432 aa14.29□□□□□ -0.12
SQSTM1-202ENST00000389805 TLN1Q9Y490 2541 aaKnown RBP14.29□□□□□ -0.12
SQSTM1-202ENST00000389805 GATA4P43694 442 aa14.28□□□□□ -0.12
SQSTM1-202ENST00000389805 TAS2R45P59539 299 aa14.28□□□□□ -0.12
SQSTM1-202ENST00000389805 HSPE1P61604 102 aaKnown RBP14.28□□□□□ -0.12
SQSTM1-202ENST00000389805 PLAUP00749 431 aa14.28□□□□□ -0.12
SQSTM1-202ENST00000389805 CSN3P07498 182 aa14.28□□□□□ -0.12
SQSTM1-202ENST00000389805 C8orf88P0DMB2 117 aa14.28□□□□□ -0.12
SQSTM1-202ENST00000389805 SLC25A33Q9BSK2 321 aa14.28□□□□□ -0.12
SQSTM1-202ENST00000389805 A0A1W2PRE2 83 aa14.28□□□□□ -0.12
SQSTM1-202ENST00000389805 CHRDL1Q9BU40 450 aa14.28□□□□□ -0.12
SQSTM1-202ENST00000389805 TRGV8A0A0C4DH27 118 aa14.27□□□□□ -0.12
SQSTM1-202ENST00000389805 C7orf71A4D174 169 aa14.27□□□□□ -0.12
SQSTM1-202ENST00000389805 IGKV1-16P04430 117 aa14.27□□□□□ -0.12
SQSTM1-202ENST00000389805 TMEM191AQ9H0A3 160 aa14.27□□□□□ -0.12
SQSTM1-202ENST00000389805 GAGE10A6NGK3 116 aa14.27□□□□□ -0.13
SQSTM1-202ENST00000389805 RND1Q92730 232 aa14.27□□□□□ -0.13
SQSTM1-202ENST00000389805 SCRT2Q9NQ03 307 aa14.27□□□□□ -0.13
SQSTM1-202ENST00000389805 OR51B2Q9Y5P1 312 aa14.27□□□□□ -0.13
SQSTM1-202ENST00000389805 TANC2Q9HCD6 1990 aa14.27□□□□□ -0.13
SQSTM1-202ENST00000389805 FAM90A9PA6NNJ1 464 aa14.26□□□□□ -0.13
SQSTM1-202ENST00000389805 CD5LO43866 347 aa14.26□□□□□ -0.13
SQSTM1-202ENST00000389805 FAM71F2Q6NXP2 309 aa14.26□□□□□ -0.13
SQSTM1-202ENST00000389805 ZNF788Q6ZQV5 615 aa14.26□□□□□ -0.13
SQSTM1-202ENST00000389805 OR4S2Q8NH73 311 aa14.26□□□□□ -0.13
SQSTM1-202ENST00000389805 PGLYRP4Q96LB8 373 aa14.26□□□□□ -0.13
SQSTM1-202ENST00000389805 FAM231BA6NCW3 169 aa14.26□□□□□ -0.13
SQSTM1-202ENST00000389805 J3QR06 171 aa14.26□□□□□ -0.13
SQSTM1-202ENST00000389805 OR2J3O76001 311 aa14.26□□□□□ -0.13
SQSTM1-202ENST00000389805 ABCA1O95477 2261 aa14.26□□□□□ -0.13
SQSTM1-202ENST00000389805 PRR30Q53SZ7 412 aaPredicted RBP14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 SLC25A2Q9BXI2 301 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 IDI2-AS1Q9NZ38 188 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 PEF1Q9UBV8 284 aaKnown RBP14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 TACC2O95359 2948 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 SRRM4A7MD48 611 aaKnown RBP14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 GOSR1O95249 250 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 GPR183P32249 361 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 RPS20P60866 119 aaKnown RBP14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 BSPH1Q075Z2 132 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 RASL11AQ6T310 242 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 ZNF835Q9Y2P0 537 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 C16orf97H3BN30 126 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 PEX7O00628 323 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 FCN3O75636 299 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 IGLC1P0CG04 106 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 SSBP2P81877 361 aaPredicted RBP14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 ADIPOQQ15848 244 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 C3orf36Q3SXR2 165 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 TMEM108Q6UXF1 575 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 SMIM12Q96EX1 92 aa14.25□□□□□ -0.13
SQSTM1-202ENST00000389805 Q8NA96 180 aa14.24□□□□□ -0.13
SQSTM1-202ENST00000389805 OR10W1Q8NGF6 305 aa14.24□□□□□ -0.13
SQSTM1-202ENST00000389805 OR1B1Q8NGR6 318 aa14.24□□□□□ -0.13
SQSTM1-202ENST00000389805 FAM167A-AS1Q96KT0 104 aa14.24□□□□□ -0.13
SQSTM1-202ENST00000389805 TMEM14BQ9NUH8 114 aa14.24□□□□□ -0.13
SQSTM1-202ENST00000389805 PRRG2O14669 202 aa14.24□□□□□ -0.13
SQSTM1-202ENST00000389805 CRXO43186 299 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-202ENST00000389805 THBDP07204 575 aa14.24□□□□□ -0.13
SQSTM1-202ENST00000389805 CCL3L1P16619 93 aa14.24□□□□□ -0.13
SQSTM1-202ENST00000389805 LINC00322Q6ZN03 302 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-202ENST00000389805 FER1L6-AS1Q8NA97 138 aa14.24□□□□□ -0.13
SQSTM1-202ENST00000389805 BLNKQ8WV28 456 aa14.24□□□□□ -0.13
SQSTM1-202ENST00000389805 CT45A6P0DMU7 189 aa14.23□□□□□ -0.13
SQSTM1-202ENST00000389805 CT45A5P0DMU8 189 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms