RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 HSPB7Q9UBY9 170 aa10.25□□□□□ -0.77
SHOX-202ENST00000381575 CELA1Q9UNI1 258 aa10.25□□□□□ -0.77
SHOX-202ENST00000381575 A0A0B4J2A0 478 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 ZNF705EA8MWA4 302 aaPredicted RBP10.24□□□□□ -0.77
SHOX-202ENST00000381575 CCR6P51684 374 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 TMBIM6P55061 237 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 ZNF90Q03938 601 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 TMED4Q7Z7H5 227 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 CSNK1G2-AS1Q8NCQ2 148 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 OR1S1Q8NH92 325 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 RNF125Q96EQ8 232 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 SOSTQ9BQB4 213 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 NRN1Q9NPD7 142 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 XCL2Q9UBD3 114 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 RSL24D1Q9UHA3 163 aaKnown RBP10.24□□□□□ -0.77
SHOX-202ENST00000381575 SHPKQ9UHJ6 478 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 TBC1D24Q9ULP9 559 aa10.24□□□□□ -0.77
SHOX-202ENST00000381575 FABP12A6NFH5 140 aa10.23□□□□□ -0.77
SHOX-202ENST00000381575 BUB3O43684 328 aa10.23□□□□□ -0.77
SHOX-202ENST00000381575 IGKV3-20P01619 116 aa10.23□□□□□ -0.77
SHOX-202ENST00000381575 IAPPP10997 89 aa10.23□□□□□ -0.77
SHOX-202ENST00000381575 MIFP14174 115 aa10.23□□□□□ -0.77
SHOX-202ENST00000381575 FXYD7P58549 80 aa10.23□□□□□ -0.77
SHOX-202ENST00000381575 GDF5OSQ5U4N7 250 aa10.23□□□□□ -0.77
SHOX-202ENST00000381575 MCFD2Q8NI22 146 aa10.23□□□□□ -0.77
SHOX-202ENST00000381575 RABL2AQ9UBK7 228 aaPredicted RBP10.23□□□□□ -0.77
SHOX-202ENST00000381575 APLNQ9ULZ1 77 aa10.23□□□□□ -0.77
SHOX-202ENST00000381575 RABL2BQ9UNT1 228 aa10.23□□□□□ -0.77
SHOX-202ENST00000381575 IGKV1D-37A0A075B6S9 117 aa10.22□□□□□ -0.77
SHOX-202ENST00000381575 ZFP92A6NM28 416 aa10.22□□□□□ -0.77
SHOX-202ENST00000381575 NOL3O60936 208 aaKnown RBP10.22□□□□□ -0.77
SHOX-202ENST00000381575 AP2S1P53680 142 aaPredicted RBP10.22□□□□□ -0.77
SHOX-202ENST00000381575 LYZP61626 148 aa10.22□□□□□ -0.77
SHOX-202ENST00000381575 SNRPD3P62318 126 aaKnown RBP10.22□□□□□ -0.77
SHOX-202ENST00000381575 OR2F1Q13607 317 aa10.22□□□□□ -0.77
SHOX-202ENST00000381575 KLF9Q13886 244 aaPredicted RBP10.22□□□□□ -0.77
SHOX-202ENST00000381575 GAMTQ14353 236 aa10.22□□□□□ -0.77
SHOX-202ENST00000381575 TMEM41BQ5BJD5 291 aa10.22□□□□□ -0.77
SHOX-202ENST00000381575 NOXA1Q86UR1 476 aa10.22□□□□□ -0.77
SHOX-202ENST00000381575 SCGB3A2Q96PL1 93 aa10.22□□□□□ -0.77
SHOX-202ENST00000381575 WDR12Q9GZL7 423 aaKnown RBP10.22□□□□□ -0.77
SHOX-202ENST00000381575 PAIP2BQ9ULR5 123 aaKnown RBP10.22□□□□□ -0.77
SHOX-202ENST00000381575 U3KQ87 197 aa10.22□□□□□ -0.77
SHOX-202ENST00000381575 H3BMM0 161 aa10.21□□□□□ -0.78
SHOX-202ENST00000381575 PYDC2Q56P42 97 aa10.21□□□□□ -0.78
SHOX-202ENST00000381575 TRIM63Q969Q1 353 aa10.21□□□□□ -0.78
SHOX-202ENST00000381575 SLC35E1Q96K37 410 aa10.21□□□□□ -0.78
SHOX-202ENST00000381575 BCL7BQ9BQE9 202 aa10.21□□□□□ -0.78
SHOX-202ENST00000381575 SCRT1Q9BWW7 348 aa10.21□□□□□ -0.78
SHOX-202ENST00000381575 HRH4Q9H3N8 390 aa10.21□□□□□ -0.78
SHOX-202ENST00000381575 DNAH2Q9P225 4427 aa10.2□□□□□ -0.78
SHOX-202ENST00000381575 ANXA3P12429 323 aa10.2□□□□□ -0.78
SHOX-202ENST00000381575 VAMP1P23763 118 aa10.2□□□□□ -0.78
SHOX-202ENST00000381575 LINC00052Q96N35 136 aa10.2□□□□□ -0.78
SHOX-202ENST00000381575 MAGT1Q9H0U3 335 aa10.2□□□□□ -0.78
SHOX-202ENST00000381575 IGHV4-4A0A075B6R2 117 aa10.19□□□□□ -0.78
SHOX-202ENST00000381575 TRAV10A0A0B4J240 114 aa10.19□□□□□ -0.78
SHOX-202ENST00000381575 C11orf94C9JXX5 98 aa10.19□□□□□ -0.78
SHOX-202ENST00000381575 HLA-DRB4P13762 266 aa10.19□□□□□ -0.78
SHOX-202ENST00000381575 SRPXP78539 464 aa10.19□□□□□ -0.78
SHOX-202ENST00000381575 C12orf74Q32Q52 190 aa10.19□□□□□ -0.78
SHOX-202ENST00000381575 CACFD1Q9UGQ2 172 aa10.19□□□□□ -0.78
SHOX-202ENST00000381575 V9GYH0 126 aa10.19□□□□□ -0.78
SHOX-202ENST00000381575 HLA-DRB4X5D2U9 266 aa10.19□□□□□ -0.78
SHOX-202ENST00000381575 FAT2Q9NYQ8 4349 aa10.19□□□□□ -0.78
SHOX-202ENST00000381575 IGHV3OR16-12A0A075B7B8 117 aa10.18□□□□□ -0.78
SHOX-202ENST00000381575 IGKV1OR2-108A0A075B7D4 117 aa10.18□□□□□ -0.78
SHOX-202ENST00000381575 PITX3O75364 302 aa10.18□□□□□ -0.78
SHOX-202ENST00000381575 FAUP35544 74 aaKnown RBP10.18□□□□□ -0.78
SHOX-202ENST00000381575 EMP1P54849 157 aa10.18□□□□□ -0.78
SHOX-202ENST00000381575 ZNF79Q15937 498 aa10.18□□□□□ -0.78
SHOX-202ENST00000381575 TOMM5Q8N4H5 51 aa10.18□□□□□ -0.78
SHOX-202ENST00000381575 PPP1R14BQ96C90 147 aa10.18□□□□□ -0.78
SHOX-202ENST00000381575 HERC2O95714 4834 aa10.18□□□□□ -0.78
SHOX-202ENST00000381575 DNAH17Q9UFH2 4485 aa10.18□□□□□ -0.78
SHOX-202ENST00000381575 PKHD1P08F94 4074 aa10.18□□□□□ -0.78
SHOX-202ENST00000381575 F6UB75 175 aa10.17□□□□□ -0.78
SHOX-202ENST00000381575 GPX4P36969 197 aaPredicted RBP10.17□□□□□ -0.78
SHOX-202ENST00000381575 NKX2-1P43699 371 aaPredicted RBP10.17□□□□□ -0.78
SHOX-202ENST00000381575 NUTF2P61970 127 aaKnown RBP10.17□□□□□ -0.78
SHOX-202ENST00000381575 PPP1R1AQ13522 171 aa10.17□□□□□ -0.78
SHOX-202ENST00000381575 TMEM128Q5BJH2 165 aa10.17□□□□□ -0.78
SHOX-202ENST00000381575 OR8G2PQ6IF36 304 aa10.17□□□□□ -0.78
SHOX-202ENST00000381575 CENPSQ8N2Z9 138 aa10.17□□□□□ -0.78
SHOX-202ENST00000381575 DEFB131BA0A096LNP1 70 aa10.16□□□□□ -0.78
SHOX-202ENST00000381575 CCDC160A6NGH7 325 aa10.16□□□□□ -0.78
SHOX-202ENST00000381575 H3BP45 60 aa10.16□□□□□ -0.78
SHOX-202ENST00000381575 WRBO00258 174 aa10.16□□□□□ -0.78
SHOX-202ENST00000381575 SOCS3O14543 225 aa10.16□□□□□ -0.78
SHOX-202ENST00000381575 HOXB5P09067 269 aa10.16□□□□□ -0.78
SHOX-202ENST00000381575 GATA2P23769 480 aaPredicted RBP10.16□□□□□ -0.78
SHOX-202ENST00000381575 TCTAP57738 103 aa10.16□□□□□ -0.78
SHOX-202ENST00000381575 RAB11AP62491 216 aa10.16□□□□□ -0.78
SHOX-202ENST00000381575 OR4B1Q8NGF8 309 aa10.16□□□□□ -0.78
SHOX-202ENST00000381575 COQ8AQ8NI60 647 aa10.16□□□□□ -0.78
SHOX-202ENST00000381575 C1QTNF4Q9BXJ3 329 aa10.16□□□□□ -0.78
SHOX-202ENST00000381575 SLC35B3Q9H1N7 401 aa10.16□□□□□ -0.78
SHOX-202ENST00000381575 DUXBA0A1W2PPF3 345 aa10.15□□□□□ -0.78
SHOX-202ENST00000381575 NUP62P37198 522 aaPredicted RBP10.15□□□□□ -0.78
SHOX-202ENST00000381575 AP3S2P59780 193 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms