RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 C22orf46C9J442 243 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 E7EUB6 86 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 ZNF207O43670 478 aaKnown RBP10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 AZU1P20160 251 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 GNG5P63218 68 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 HCP5Q6MZN7 132 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 TRAT1Q6PIZ9 186 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 JMJD8Q96S16 334 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 SPG11Q96JI7 2443 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 CUL9Q8IWT3 2517 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 H3BUT2 72 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 ORM2P19652 201 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 TNFAIP6P98066 277 aaPredicted RBP10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 VWC2Q2TAL6 325 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 OR4A5Q8NH83 315 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 IGFBPL1Q8WX77 278 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 CCL17Q92583 94 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 THYN1Q9P016 225 aa10.13□□□□□ -0.79
PRPF40B-202ENST00000380281 A0A1W2PRD5 423 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 A0A1W2PRF3 423 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 A0A1W2PRM7 423 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 C15orf61A6NNL5 157 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 MFAP2P55001 183 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 ARF6P62330 175 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 UBE2L3P68036 154 aaKnown RBP10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 C17orf58Q2M2W7 97 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 RAB37Q96AX2 223 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 ZNF71Q9NQZ8 489 aaPredicted RBP10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 JPT1Q9UK76 154 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 TNRC6BQ9UPQ9 1833 aaKnown RBP10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 GGTLC3B5MD39 225 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 GDF5OSQ5U4N7 250 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 AP1S3Q96PC3 154 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 COMMD5Q9GZQ3 224 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 ST20Q9HBF5 79 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 ANKHD1Q8IWZ3 2542 aaKnown RBP10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 ZNF292O60281 2723 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 MT-CO2P00403 227 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 MOSP00540 346 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 FOXA3P55318 350 aaPredicted RBP10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 RPL24P83731 157 aaKnown RBP10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 IBA57Q5T440 356 aaKnown RBP10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 SSX8Q7RTT4 187 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 RAB1CQ92928 201 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 HARBI1Q96MB7 349 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 HILPDAQ9Y5L2 63 aa10.12□□□□□ -0.79
PRPF40B-202ENST00000380281 SAA1P0DJI8 122 aaPredicted RBP10.11□□□□□ -0.79
PRPF40B-202ENST00000380281 ZNF474Q6S9Z5 364 aaPredicted RBP10.11□□□□□ -0.79
PRPF40B-202ENST00000380281 PRSS57Q6UWY2 283 aa10.11□□□□□ -0.79
PRPF40B-202ENST00000380281 FBLL1A6NHQ2 334 aaKnown RBP10.11□□□□□ -0.79
PRPF40B-202ENST00000380281 NPIPB3Q92617 1050 aa10.11□□□□□ -0.79
PRPF40B-202ENST00000380281 MRPL20Q9BYC9 149 aaKnown RBP10.11□□□□□ -0.79
PRPF40B-202ENST00000380281 CHODLQ9H9P2 273 aa10.11□□□□□ -0.79
PRPF40B-202ENST00000380281 DKK4Q9UBT3 224 aa10.11□□□□□ -0.79
PRPF40B-202ENST00000380281 DCHS2Q6V1P9 2916 aa10.11□□□□□ -0.79
PRPF40B-202ENST00000380281 PRR33A8MZF0 331 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 K7EM74 188 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 NCOR2Q9Y618 2525 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 KBTBD11-OT1A0A1B0GTJ5 212 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 C9JCJ5 164 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 NDUFS8O00217 210 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 MPDU1O75352 247 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 APOBEC3AP31941 199 aaPredicted RBP10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 GPR183P32249 361 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 ZNF137PP52743 207 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 PLP1P60201 277 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 MEF2CQ06413 473 aaPredicted RBP10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 UFSP1Q6NVU6 142 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 PRR7Q8TB68 274 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 PRO3102Q9H379 93 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 PRSS46E5RG02 174 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 SEM1Q6ZVN7 128 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 GTF2H5Q6ZYL4 71 aa10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 LSM4Q9Y4Z0 139 aaKnown RBP10.1□□□□□ -0.79
PRPF40B-202ENST00000380281 TRAV17A0A0B4J275 112 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 TEX50A0A1B0GTY4 177 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 SYS1-DBNDD2H3BUS1 97 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 CT45A6P0DMU7 189 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 CT45A5P0DMU8 189 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 CT45A7P0DMV0 189 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 OR52E5Q8NH55 327 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 ZNF503Q96F45 646 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 PERPQ96FX8 193 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 URB1-AS1Q96HZ7 61 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 SCRT2Q9NQ03 307 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 HTR1DP28221 377 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 TXNDC17Q9BRA2 123 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 RNF7Q9UBF6 113 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 SLC25A15Q9Y619 301 aa10.09□□□□□ -0.79
PRPF40B-202ENST00000380281 C19orf67A6NJJ6 358 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 CEACAM3P40198 252 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 SAP30LQ9HAJ7 183 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 TPSG1Q9NRR2 321 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 ZNF835Q9Y2P0 537 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 PPIAL4EA0A075B759 164 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 PPIAL4CA0A0B4J2A2 164 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 SLC25A17O43808 307 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 COX7A2P2O60397 106 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 PPIAL4FP0DN26 164 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 ZNF138P52744 262 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms