RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 FUT9Q9Y231 359 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 SCO2A0A1W2PP80 73 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 RBP4P02753 201 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 CRYGBP07316 175 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 RUSC1-AS1Q66K80 236 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 NPIPB3Q92617 1050 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 SIGLEC9Q9Y336 463 aa11.91□□□□□ -0.5
PRNP-201ENST00000379440 IGLC7A0M8Q6 106 aa11.9□□□□□ -0.5
PRNP-201ENST00000379440 AREGP15514 252 aa11.9□□□□□ -0.5
PRNP-201ENST00000379440 GNLYP22749 145 aa11.9□□□□□ -0.5
PRNP-201ENST00000379440 TMEM183BQ1AE95 376 aa11.9□□□□□ -0.5
PRNP-201ENST00000379440 TMEM37Q8WXS4 190 aa11.9□□□□□ -0.5
PRNP-201ENST00000379440 SRD5A3Q9H8P0 318 aa11.9□□□□□ -0.5
PRNP-201ENST00000379440 LY6LH3BQJ8 138 aa11.9□□□□□ -0.5
PRNP-201ENST00000379440 SUB1P53999 127 aaKnown RBP eCLIP11.9□□□□□ -0.5
PRNP-201ENST00000379440 LGALS4P56470 323 aa11.9□□□□□ -0.5
PRNP-201ENST00000379440 KLRD1Q13241 179 aa11.9□□□□□ -0.5
PRNP-201ENST00000379440 CLEC12BQ2HXU8 276 aa11.9□□□□□ -0.5
PRNP-201ENST00000379440 ZNF114Q8NC26 417 aa11.9□□□□□ -0.5
PRNP-201ENST00000379440 FBXL15Q9H469 300 aa11.9□□□□□ -0.5
PRNP-201ENST00000379440 LOC102724200A0A096LPH7 203 aaPredicted RBP11.89□□□□□ -0.51
PRNP-201ENST00000379440 A0A1W2PRD5 423 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 A0A1W2PRF3 423 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 A0A1W2PRM7 423 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 DTX2Q86UW9 622 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 MMD2Q8IY49 270 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 ITLN2Q8WWU7 325 aaPredicted RBP11.89□□□□□ -0.51
PRNP-201ENST00000379440 ZNF503Q96F45 646 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 SSBP3Q9BWW4 388 aaPredicted RBP11.89□□□□□ -0.51
PRNP-201ENST00000379440 CHODLQ9H9P2 273 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 TRBV20OR9-2A0A075B6H5 130 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 C19orf84I3L1E1 186 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 RPL27AP46776 148 aaKnown RBP11.89□□□□□ -0.51
PRNP-201ENST00000379440 MFAP2P55001 183 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 ZNF90Q03938 601 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 STXBP6Q8NFX7 210 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 HILPDAQ9Y5L2 63 aa11.89□□□□□ -0.51
PRNP-201ENST00000379440 H7BYZ3 331 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 FCN1O00602 326 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 MORN5Q5VZ52 161 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 PPP1R27Q86WC6 154 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 MEGF9Q9H1U4 602 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 UBTD1Q9HAC8 227 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 SMPXQ9UHP9 88 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 AMMECR1Q9Y4X0 333 aaPredicted RBP11.88□□□□□ -0.51
PRNP-201ENST00000379440 SVEP1Q4LDE5 3571 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 IGKV1D-37A0A075B6S9 117 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 IGHV3-21A0A0B4J1V1 117 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 TIMM23O14925 209 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 VENTXO95231 258 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 MT-CO2P00403 227 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 PFN1P07737 140 aaKnown RBP11.88□□□□□ -0.51
PRNP-201ENST00000379440 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
PRNP-201ENST00000379440 TRAV5A0A0B4J249 113 aa11.87□□□□□ -0.51
PRNP-201ENST00000379440 OR7C2O60412 319 aa11.87□□□□□ -0.51
PRNP-201ENST00000379440 OR10J4P0C629 311 aa11.87□□□□□ -0.51
PRNP-201ENST00000379440 CD24P25063 80 aa11.87□□□□□ -0.51
PRNP-201ENST00000379440 TXNDC17Q9BRA2 123 aa11.87□□□□□ -0.51
PRNP-201ENST00000379440 PKD1L2Q7Z442 2459 aa11.87□□□□□ -0.51
PRNP-201ENST00000379440 GALR1P47211 349 aa11.87□□□□□ -0.51
PRNP-201ENST00000379440 TPTE2P1Q5T6R2 138 aa11.87□□□□□ -0.51
PRNP-201ENST00000379440 SAMD13Q5VXD3 122 aa11.87□□□□□ -0.51
PRNP-201ENST00000379440 TECRQ9NZ01 308 aaKnown RBP11.87□□□□□ -0.51
PRNP-201ENST00000379440 CSMD1Q96PZ7 3565 aa11.86□□□□□ -0.51
PRNP-201ENST00000379440 PSMB11A5LHX3 300 aa11.86□□□□□ -0.51
PRNP-201ENST00000379440 HTR1DP28221 377 aa11.86□□□□□ -0.51
PRNP-201ENST00000379440 VAMP3Q15836 100 aa11.86□□□□□ -0.51
PRNP-201ENST00000379440 MS4A10Q96PG2 267 aa11.86□□□□□ -0.51
PRNP-201ENST00000379440 SLC25A33Q9BSK2 321 aa11.86□□□□□ -0.51
PRNP-201ENST00000379440 PAM16Q9Y3D7 125 aa11.86□□□□□ -0.51
PRNP-201ENST00000379440 ASH1LQ9NR48 2969 aaKnown RBP11.86□□□□□ -0.51
PRNP-201ENST00000379440 TOMM20LQ6UXN7 152 aa11.86□□□□□ -0.51
PRNP-201ENST00000379440 VAMP8Q9BV40 100 aa11.86□□□□□ -0.51
PRNP-201ENST00000379440 ZFP36P26651 326 aaKnown RBP11.85□□□□□ -0.51
PRNP-201ENST00000379440 GPR6P46095 362 aaPredicted RBP11.85□□□□□ -0.51
PRNP-201ENST00000379440 PLGLAQ15195 96 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 TDRG1Q3Y452 100 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 OR11H6Q8NGC7 330 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 UHRF2Q96PU4 802 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 DPM3Q9P2X0 92 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 LAMTOR2Q9Y2Q5 125 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 TCRBV4S1A1TA0A5B7 111 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 TEX22C9J3V5 150 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 CORTO00230 105 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 PATE2Q6UY27 113 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 TEX43Q6ZNM6 134 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 ANAPC16Q96DE5 110 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 OR5B12Q96R08 314 aa11.85□□□□□ -0.51
PRNP-201ENST00000379440 MOSP00540 346 aa11.84□□□□□ -0.51
PRNP-201ENST00000379440 C8orf88P0DMB2 117 aa11.84□□□□□ -0.51
PRNP-201ENST00000379440 UNQ5815/PRO19632Q6UWF5 114 aa11.84□□□□□ -0.51
PRNP-201ENST00000379440 OCC1Q8TAD7 63 aa11.84□□□□□ -0.51
PRNP-201ENST00000379440 C19orf24Q9BVV8 132 aa11.84□□□□□ -0.51
PRNP-201ENST00000379440 TMEM167BQ9NRX6 74 aa11.84□□□□□ -0.51
PRNP-201ENST00000379440 MED13LQ71F56 2210 aa11.84□□□□□ -0.51
PRNP-201ENST00000379440 PRTN3P24158 256 aa11.84□□□□□ -0.51
PRNP-201ENST00000379440 PQLC2Q6ZP29 291 aa11.84□□□□□ -0.51
PRNP-201ENST00000379440 THAP8Q8NA92 274 aa11.84□□□□□ -0.51
PRNP-201ENST00000379440 SRSF12Q8WXF0 261 aaKnown RBP11.84□□□□□ -0.51
PRNP-201ENST00000379440 ZNF479Q96JC4 524 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms