RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 TIMM9Q9Y5J7 89 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 PUS1Q9Y606 427 aaKnown RBP eCLIP9.98□□□□□ -0.81
CBWD3-203ENST00000377344 IGHV3OR16-8A0A075B7F1 116 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 TSPAN15O95858 294 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 TOMM40O96008 361 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 CFDP00746 253 aaPredicted RBP9.98□□□□□ -0.81
CBWD3-203ENST00000377344 LINC00869P0C866 280 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 SPP1P10451 314 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 RPL29P47914 159 aaKnown RBP9.98□□□□□ -0.81
CBWD3-203ENST00000377344 RPEL1Q2QD12 228 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 EIF5AL1Q6IS14 154 aaKnown RBP9.98□□□□□ -0.81
CBWD3-203ENST00000377344 ALKAL2Q6UX46 152 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 Q6ZRG5 221 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 OR11H1Q8NG94 326 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 DUX3Q96PT4 197 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 PSMG3Q9BT73 122 aaPredicted RBP9.98□□□□□ -0.81
CBWD3-203ENST00000377344 SLC39A9Q9NUM3 307 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 DOK5Q9P104 306 aa9.98□□□□□ -0.81
CBWD3-203ENST00000377344 IGHV4OR15-8A0A075B7B6 117 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 A0A087WW49 117 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 HSPB1P04792 205 aaKnown RBP9.97□□□□□ -0.81
CBWD3-203ENST00000377344 IL4P05112 153 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 SEC11BP0C7V7 166 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 ORM2P19652 201 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 LYZP61626 148 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 PRR20EP86478 221 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 PRR20CP86479 221 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 PRR20DP86480 221 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 PRR20BP86481 221 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 PRR20AP86496 221 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 ZNF600Q6ZNG1 722 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 OR51G1Q8NGK1 321 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 DPF1Q92782 380 aa9.97□□□□□ -0.81
CBWD3-203ENST00000377344 ZNF320A2RRD8 509 aa9.96□□□□□ -0.81
CBWD3-203ENST00000377344 SERF2P84101 59 aa9.96□□□□□ -0.81
CBWD3-203ENST00000377344 AKR1C8PQ5T2L2 129 aa9.96□□□□□ -0.81
CBWD3-203ENST00000377344 TEX261Q6UWH6 196 aa9.96□□□□□ -0.81
CBWD3-203ENST00000377344 OR1B1Q8NGR6 318 aa9.96□□□□□ -0.81
CBWD3-203ENST00000377344 FBN1P35555 2871 aaKnown RBP9.96□□□□□ -0.82
CBWD3-203ENST00000377344 LINC01619G3V211 115 aa9.96□□□□□ -0.82
CBWD3-203ENST00000377344 OR5G3P0C626 314 aa9.96□□□□□ -0.82
CBWD3-203ENST00000377344 GCSAMLQ5JQS6 135 aa9.96□□□□□ -0.82
CBWD3-203ENST00000377344 FAM74A1Q5RGS3 127 aa9.96□□□□□ -0.82
CBWD3-203ENST00000377344 TOMM20LQ6UXN7 152 aa9.96□□□□□ -0.82
CBWD3-203ENST00000377344 OR1N2Q8NGR9 330 aa9.96□□□□□ -0.82
CBWD3-203ENST00000377344 RNF125Q96EQ8 232 aa9.96□□□□□ -0.82
CBWD3-203ENST00000377344 PHYHIPLQ96FC7 376 aa9.96□□□□□ -0.82
CBWD3-203ENST00000377344 RCC1LQ96I51 464 aaKnown RBP9.96□□□□□ -0.82
CBWD3-203ENST00000377344 C20orf24Q9BUV8 137 aa9.96□□□□□ -0.82
CBWD3-203ENST00000377344 VSIRQ9H7M9 311 aa9.96□□□□□ -0.82
CBWD3-203ENST00000377344 ATRQ13535 2644 aa9.95□□□□□ -0.82
CBWD3-203ENST00000377344 COX7A2P2O60397 106 aa9.95□□□□□ -0.82
CBWD3-203ENST00000377344 HOXD3P31249 432 aaPredicted RBP9.95□□□□□ -0.82
CBWD3-203ENST00000377344 ACOT6Q3I5F7 207 aaPredicted RBP9.95□□□□□ -0.82
CBWD3-203ENST00000377344 FAM106AQ4KMX7 169 aa9.95□□□□□ -0.82
CBWD3-203ENST00000377344 NDUFA11Q86Y39 141 aa9.95□□□□□ -0.82
CBWD3-203ENST00000377344 NDUFA4O00483 81 aa9.94□□□□□ -0.82
CBWD3-203ENST00000377344 IFNA7P01567 189 aa9.94□□□□□ -0.82
CBWD3-203ENST00000377344 M6PRP20645 277 aa9.94□□□□□ -0.82
CBWD3-203ENST00000377344 ZP3P21754 424 aa9.94□□□□□ -0.82
CBWD3-203ENST00000377344 SLURP1P55000 103 aa9.94□□□□□ -0.82
CBWD3-203ENST00000377344 RAB2AP61019 212 aa9.94□□□□□ -0.82
CBWD3-203ENST00000377344 C12orf54Q6X4T0 127 aa9.94□□□□□ -0.82
CBWD3-203ENST00000377344 C3orf56Q8N813 242 aa9.94□□□□□ -0.82
CBWD3-203ENST00000377344 ZNF680Q8NEM1 530 aa9.94□□□□□ -0.82
CBWD3-203ENST00000377344 RAX2Q96IS3 184 aa9.94□□□□□ -0.82
CBWD3-203ENST00000377344 CITED1Q99966 193 aa9.94□□□□□ -0.82
CBWD3-203ENST00000377344 WI2-2373I1.2A0A1W2PRP0 233 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 ADARB2-AS1A8MUL3 147 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 CCL24O00175 119 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 ZNF207O43670 478 aaKnown RBP9.93□□□□□ -0.82
CBWD3-203ENST00000377344 HYPMO75409 117 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 MBP02144 154 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 SYNJ2BPP57105 145 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 USF2Q15853 346 aaPredicted RBP9.93□□□□□ -0.82
CBWD3-203ENST00000377344 TMEM41BQ5BJD5 291 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 C10orf113Q5VZT2 155 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 UNQ9165/PRO28630Q6UXU0 137 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 OR10G4Q8NGN3 311 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 OR10G9Q8NGN4 311 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 OR10G7Q8NGN6 311 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 OR1L4Q8NGR5 311 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 UHRF2Q96PU4 802 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 DNAJC4Q9NNZ3 241 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 UMAD1C9J7I0 102 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 FAM122CQ6P4D5 195 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 GPHB5Q86YW7 130 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 TMEM37Q8WXS4 190 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 ZNF414Q96IQ9 312 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 PFDN5Q99471 154 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 ZFAND3Q9H8U3 227 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 RPRMQ9NS64 109 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 PLA2G2EQ9NZK7 142 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 UBQLN2Q9UHD9 624 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 HIGD1AQ9Y241 93 aa9.93□□□□□ -0.82
CBWD3-203ENST00000377344 ELOA3CA0A087WX78 387 aaPredicted RBP9.92□□□□□ -0.82
CBWD3-203ENST00000377344 A0A1W2PPV4 95 aa9.92□□□□□ -0.82
CBWD3-203ENST00000377344 FHITP49789 147 aa9.92□□□□□ -0.82
CBWD3-203ENST00000377344 PLP1P60201 277 aa9.92□□□□□ -0.82
CBWD3-203ENST00000377344 IFITM2Q01629 132 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms