RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 SLC35E1Q96K37 410 aa13.07□□□□□ -0.32
IRF3-202ENST00000377135 PAIP2BQ9ULR5 123 aaKnown RBP13.07□□□□□ -0.32
IRF3-202ENST00000377135 LYSTQ99698 3801 aa13.07□□□□□ -0.32
IRF3-202ENST00000377135 LINC00854A0A1B0GVQ3 168 aa13.06□□□□□ -0.32
IRF3-202ENST00000377135 FAM90A26D6RGX4 464 aa13.06□□□□□ -0.32
IRF3-202ENST00000377135 BUB3O43684 328 aa13.06□□□□□ -0.32
IRF3-202ENST00000377135 TRIQKQ629K1 86 aa13.06□□□□□ -0.32
IRF3-202ENST00000377135 MAGT1Q9H0U3 335 aa13.06□□□□□ -0.32
IRF3-202ENST00000377135 NAP1L6A6NFF2 107 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 KNCNA6PVL3 124 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 RPP30P78346 268 aaKnown RBP13.05□□□□□ -0.32
IRF3-202ENST00000377135 ZNF90Q03938 601 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 CEMP1Q6PRD7 247 aaPredicted RBP13.05□□□□□ -0.32
IRF3-202ENST00000377135 CIB3Q96Q77 187 aaPredicted RBP13.05□□□□□ -0.32
IRF3-202ENST00000377135 PBDC1Q9BVG4 233 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 PFDN2Q9UHV9 154 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 C9orf170A2RU37 121 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 SNRPGP15A8MWD9 76 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 WRBO00258 174 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 SYNGR2O43760 224 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 FABP1P07148 127 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 UBE2MP61081 183 aaKnown RBP13.05□□□□□ -0.32
IRF3-202ENST00000377135 ACTL10Q5JWF8 245 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 GGNBP1Q5YKI7 109 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 RNF125Q96EQ8 232 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 RAB40CQ96S21 281 aa13.05□□□□□ -0.32
IRF3-202ENST00000377135 IGKV1D-37A0A075B6S9 117 aa13.04□□□□□ -0.32
IRF3-202ENST00000377135 NUPR2A6NF83 97 aa13.04□□□□□ -0.32
IRF3-202ENST00000377135 CENPXA8MT69 81 aa13.04□□□□□ -0.32
IRF3-202ENST00000377135 NDUFB6O95139 128 aa13.04□□□□□ -0.32
IRF3-202ENST00000377135 PSMG4Q5JS54 123 aa13.04□□□□□ -0.32
IRF3-202ENST00000377135 SIGLEC15Q6ZMC9 328 aa13.04□□□□□ -0.32
IRF3-202ENST00000377135 TRPT1Q86TN4 253 aaKnown RBP13.04□□□□□ -0.32
IRF3-202ENST00000377135 FLVCR2Q9UPI3 526 aa13.04□□□□□ -0.32
IRF3-202ENST00000377135 AGRNO00468 2067 aa13.04□□□□□ -0.32
IRF3-202ENST00000377135 SNRPD3P62318 126 aaKnown RBP13.03□□□□□ -0.32
IRF3-202ENST00000377135 OR2F1Q13607 317 aa13.03□□□□□ -0.32
IRF3-202ENST00000377135 MORN3Q6PF18 240 aaPredicted RBP13.03□□□□□ -0.32
IRF3-202ENST00000377135 NRN1Q9NPD7 142 aa13.03□□□□□ -0.32
IRF3-202ENST00000377135 KLK5Q9Y337 293 aaPredicted RBP13.03□□□□□ -0.32
IRF3-202ENST00000377135 ADAP1O75689 374 aa13.02□□□□□ -0.33
IRF3-202ENST00000377135 GIG44P09565 113 aaPredicted RBP13.02□□□□□ -0.33
IRF3-202ENST00000377135 SPANXN5Q5MJ07 72 aa13.02□□□□□ -0.33
IRF3-202ENST00000377135 OR8G2PQ6IF36 304 aa13.02□□□□□ -0.33
IRF3-202ENST00000377135 SDHCQ99643 169 aaPredicted RBP13.02□□□□□ -0.33
IRF3-202ENST00000377135 SEPSECSQ9HD40 501 aaKnown RBP13.02□□□□□ -0.33
IRF3-202ENST00000377135 DEFB4AO15263 64 aa13.01□□□□□ -0.33
IRF3-202ENST00000377135 IFNA21P01568 189 aa13.01□□□□□ -0.33
IRF3-202ENST00000377135 OR4E1P0C645 316 aa13.01□□□□□ -0.33
IRF3-202ENST00000377135 SPP1P10451 314 aa13.01□□□□□ -0.33
IRF3-202ENST00000377135 NUP62P37198 522 aaPredicted RBP13.01□□□□□ -0.33
IRF3-202ENST00000377135 ID3Q02535 119 aa13.01□□□□□ -0.33
IRF3-202ENST00000377135 TMEM41BQ5BJD5 291 aa13.01□□□□□ -0.33
IRF3-202ENST00000377135 COQ8AQ8NI60 647 aa13.01□□□□□ -0.33
IRF3-202ENST00000377135 C11orf45Q8TAV5 145 aa13.01□□□□□ -0.33
IRF3-202ENST00000377135 TRGV9Q99603 122 aa13.01□□□□□ -0.33
IRF3-202ENST00000377135 NDUFA13Q9P0J0 144 aa13.01□□□□□ -0.33
IRF3-202ENST00000377135 PLECQ15149 4684 aaKnown RBP13.01□□□□□ -0.33
IRF3-202ENST00000377135 LYZP61626 148 aa13□□□□□ -0.33
IRF3-202ENST00000377135 C4orf46Q504U0 113 aa13□□□□□ -0.33
IRF3-202ENST00000377135 PHLDA1Q8WV24 401 aaPredicted RBP13□□□□□ -0.33
IRF3-202ENST00000377135 PPP1R14BQ96C90 147 aa13□□□□□ -0.33
IRF3-202ENST00000377135 STRAPQ9Y3F4 350 aaKnown RBP13□□□□□ -0.33
IRF3-202ENST00000377135 IGKV1OR2-108A0A075B7D4 117 aa12.99□□□□□ -0.33
IRF3-202ENST00000377135 ANXA7P20073 488 aaKnown RBP12.99□□□□□ -0.33
IRF3-202ENST00000377135 NANOS2P60321 138 aaKnown RBP12.99□□□□□ -0.33
IRF3-202ENST00000377135 C1orf194Q5T5A4 169 aa12.99□□□□□ -0.33
IRF3-202ENST00000377135 THAP8Q8NA92 274 aa12.99□□□□□ -0.33
IRF3-202ENST00000377135 C7orf50Q9BRJ6 194 aaKnown RBP12.99□□□□□ -0.33
IRF3-202ENST00000377135 FBXL17Q9UF56 701 aa12.99□□□□□ -0.33
IRF3-202ENST00000377135 HYDINQ4G0P3 5121 aa12.99□□□□□ -0.33
IRF3-202ENST00000377135 LY6G6CO95867 125 aa12.98□□□□□ -0.33
IRF3-202ENST00000377135 CFDP00746 253 aaPredicted RBP12.98□□□□□ -0.33
IRF3-202ENST00000377135 IL7P13232 177 aa12.98□□□□□ -0.33
IRF3-202ENST00000377135 POLR2GP62487 172 aaKnown RBP eCLIP12.98□□□□□ -0.33
IRF3-202ENST00000377135 OR8I2Q8N0Y5 310 aa12.98□□□□□ -0.33
IRF3-202ENST00000377135 LINC00052Q96N35 136 aa12.98□□□□□ -0.33
IRF3-202ENST00000377135 MFFQ9GZY8 342 aa12.98□□□□□ -0.33
IRF3-202ENST00000377135 C11orf68Q9H3H3 251 aaKnown RBP12.98□□□□□ -0.33
IRF3-202ENST00000377135 PRSS46E5RG02 174 aa12.97□□□□□ -0.33
IRF3-202ENST00000377135 H3BP45 60 aa12.97□□□□□ -0.33
IRF3-202ENST00000377135 ID1P41134 155 aa12.97□□□□□ -0.33
IRF3-202ENST00000377135 NKX2-1P43699 371 aaPredicted RBP12.97□□□□□ -0.33
IRF3-202ENST00000377135 NUTF2P61970 127 aaKnown RBP12.97□□□□□ -0.33
IRF3-202ENST00000377135 CLEC5AQ9NY25 188 aa12.97□□□□□ -0.33
IRF3-202ENST00000377135 PSENENQ9NZ42 101 aa12.97□□□□□ -0.33
IRF3-202ENST00000377135 H3BMM0 161 aa12.96□□□□□ -0.33
IRF3-202ENST00000377135 C4BPBP20851 252 aa12.96□□□□□ -0.33
IRF3-202ENST00000377135 BTCP35070 178 aa12.96□□□□□ -0.33
IRF3-202ENST00000377135 CNPY1Q3B7I2 92 aa12.96□□□□□ -0.33
IRF3-202ENST00000377135 LINC00476Q8WZB0 136 aa12.96□□□□□ -0.33
IRF3-202ENST00000377135 WDR12Q9GZL7 423 aaKnown RBP12.96□□□□□ -0.33
IRF3-202ENST00000377135 CSNK1G2-AS1Q8NCQ2 148 aa12.96□□□□□ -0.34
IRF3-202ENST00000377135 OR4D5Q8NGN0 318 aa12.96□□□□□ -0.34
IRF3-202ENST00000377135 SMIM8Q96KF7 97 aa12.96□□□□□ -0.34
IRF3-202ENST00000377135 IGHV4-28A0A0C4DH34 117 aa12.95□□□□□ -0.34
IRF3-202ENST00000377135 PLA2G10O15496 165 aa12.95□□□□□ -0.34
IRF3-202ENST00000377135 RBMY1A1P0DJD3 496 aaKnown RBP12.95□□□□□ -0.34
IRF3-202ENST00000377135 RBMY1CP0DJD4 496 aa12.95□□□□□ -0.34
IRF3-202ENST00000377135 MIFP14174 115 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms