RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 RABL2AQ9UBK7 228 aaPredicted RBP16.68■□□□□ 0.26
C9orf47-202ENST00000375850 RABL2BQ9UNT1 228 aa16.68■□□□□ 0.26
C9orf47-202ENST00000375850 KCNIP3Q9Y2W7 256 aa16.68■□□□□ 0.26
C9orf47-202ENST00000375850 SPART-AS1P0CW21 52 aa16.67■□□□□ 0.26
C9orf47-202ENST00000375850 SULT1A3P0DMM9 295 aa16.67■□□□□ 0.26
C9orf47-202ENST00000375850 SULT1A4P0DMN0 295 aa16.67■□□□□ 0.26
C9orf47-202ENST00000375850 OR51G1Q8NGK1 321 aa16.67■□□□□ 0.26
C9orf47-202ENST00000375850 TMEM170AQ8WVE7 144 aa16.67■□□□□ 0.26
C9orf47-202ENST00000375850 ACY3Q96HD9 319 aa16.67■□□□□ 0.26
C9orf47-202ENST00000375850 CLUHP3Q96NS8 147 aa16.67■□□□□ 0.26
C9orf47-202ENST00000375850 PRRT1Q99946 306 aa16.67■□□□□ 0.26
C9orf47-202ENST00000375850 GPR132Q9UNW8 380 aa16.67■□□□□ 0.26
C9orf47-202ENST00000375850 PSG1P11464 419 aa16.66■□□□□ 0.26
C9orf47-202ENST00000375850 ID1P41134 155 aa16.66■□□□□ 0.26
C9orf47-202ENST00000375850 SMIM4Q8WVI0 70 aa16.66■□□□□ 0.26
C9orf47-202ENST00000375850 RNF125Q96EQ8 232 aa16.66■□□□□ 0.26
C9orf47-202ENST00000375850 PIGBOS1A0A0B4J2F0 54 aa16.65■□□□□ 0.26
C9orf47-202ENST00000375850 ZNF705FA8MVS1 300 aaPredicted RBP16.65■□□□□ 0.26
C9orf47-202ENST00000375850 IFNA10P01566 189 aa16.65■□□□□ 0.26
C9orf47-202ENST00000375850 FABP1P07148 127 aa16.65■□□□□ 0.26
C9orf47-202ENST00000375850 ZNF705DP0CH99 300 aaPredicted RBP16.65■□□□□ 0.26
C9orf47-202ENST00000375850 ZNF705BP0CI00 300 aaPredicted RBP16.65■□□□□ 0.26
C9orf47-202ENST00000375850 AKAIN1P0CW23 69 aa16.65■□□□□ 0.26
C9orf47-202ENST00000375850 SPATA31B1PQ5VZV4 182 aa16.65■□□□□ 0.26
C9orf47-202ENST00000375850 SCGB3A2Q96PL1 93 aa16.65■□□□□ 0.26
C9orf47-202ENST00000375850 RGS5O15539 181 aa16.64■□□□□ 0.25
C9orf47-202ENST00000375850 NXPH3O95157 252 aa16.64■□□□□ 0.25
C9orf47-202ENST00000375850 CCR6P51684 374 aa16.64■□□□□ 0.25
C9orf47-202ENST00000375850 KLF9Q13886 244 aaPredicted RBP16.64■□□□□ 0.25
C9orf47-202ENST00000375850 C1orf194Q5T5A4 169 aa16.64■□□□□ 0.25
C9orf47-202ENST00000375850 SAMD13Q5VXD3 122 aa16.64■□□□□ 0.25
C9orf47-202ENST00000375850 FOXI2Q6ZQN5 318 aa16.64■□□□□ 0.25
C9orf47-202ENST00000375850 A0A1B0GVY2 172 aa16.63■□□□□ 0.25
C9orf47-202ENST00000375850 CTDSPLO15194 276 aa16.63■□□□□ 0.25
C9orf47-202ENST00000375850 PSMB3P49720 205 aa16.63■□□□□ 0.25
C9orf47-202ENST00000375850 LGALS9BQ3B8N2 356 aa16.63■□□□□ 0.25
C9orf47-202ENST00000375850 FAAP20Q6NZ36 180 aa16.63■□□□□ 0.25
C9orf47-202ENST00000375850 ZNF767PQ75MW2 155 aa16.63■□□□□ 0.25
C9orf47-202ENST00000375850 LGI3Q8N145 548 aa16.63■□□□□ 0.25
C9orf47-202ENST00000375850 HSPB7Q9UBY9 170 aa16.63■□□□□ 0.25
C9orf47-202ENST00000375850 RFNGQ9Y644 331 aa16.63■□□□□ 0.25
C9orf47-202ENST00000375850 A0A0B4J2A0 478 aa16.62■□□□□ 0.25
C9orf47-202ENST00000375850 MED14OSP0DP75 135 aa16.62■□□□□ 0.25
C9orf47-202ENST00000375850 GPX4P36969 197 aaPredicted RBP16.62■□□□□ 0.25
C9orf47-202ENST00000375850 OR4C16Q8NGL9 310 aa16.62■□□□□ 0.25
C9orf47-202ENST00000375850 DTD1Q8TEA8 209 aa16.62■□□□□ 0.25
C9orf47-202ENST00000375850 NAA50Q9GZZ1 169 aaKnown RBP16.62■□□□□ 0.25
C9orf47-202ENST00000375850 MIXL1Q9H2W2 232 aa16.62■□□□□ 0.25
C9orf47-202ENST00000375850 SAV1Q9H4B6 383 aaPredicted RBP16.62■□□□□ 0.25
C9orf47-202ENST00000375850 SHPKQ9UHJ6 478 aa16.62■□□□□ 0.25
C9orf47-202ENST00000375850 PRSS29PA6NIE9 313 aa16.61■□□□□ 0.25
C9orf47-202ENST00000375850 ZFP92A6NM28 416 aa16.61■□□□□ 0.25
C9orf47-202ENST00000375850 IFNA21P01568 189 aa16.61■□□□□ 0.25
C9orf47-202ENST00000375850 SUPT4H1P63272 117 aaKnown RBP16.61■□□□□ 0.25
C9orf47-202ENST00000375850 SRPXP78539 464 aa16.61■□□□□ 0.25
C9orf47-202ENST00000375850 SMCO1Q147U7 214 aa16.61■□□□□ 0.25
C9orf47-202ENST00000375850 PBDC1Q9BVG4 233 aa16.61■□□□□ 0.25
C9orf47-202ENST00000375850 SCP2D1Q9UJQ7 156 aa16.61■□□□□ 0.25
C9orf47-202ENST00000375850 COQ8AQ8NI60 647 aa16.6■□□□□ 0.25
C9orf47-202ENST00000375850 SLC35E1Q96K37 410 aa16.6■□□□□ 0.25
C9orf47-202ENST00000375850 KIAA1109Q2LD37 5005 aa16.59■□□□□ 0.25
C9orf47-202ENST00000375850 OXA1LQ15070 435 aa16.59■□□□□ 0.25
C9orf47-202ENST00000375850 CLVS1Q8IUQ0 354 aaPredicted RBP16.59■□□□□ 0.25
C9orf47-202ENST00000375850 OR51S1Q8NGJ8 323 aa16.59■□□□□ 0.25
C9orf47-202ENST00000375850 LINC00052Q96N35 136 aa16.59■□□□□ 0.25
C9orf47-202ENST00000375850 GOLT1BQ9Y3E0 138 aa16.59■□□□□ 0.25
C9orf47-202ENST00000375850 SNRPGP15A8MWD9 76 aa16.58■□□□□ 0.24
C9orf47-202ENST00000375850 ISLRO14498 428 aa16.58■□□□□ 0.24
C9orf47-202ENST00000375850 ANXA3P12429 323 aa16.58■□□□□ 0.24
C9orf47-202ENST00000375850 NIPSNAP3BQ9BS92 247 aa16.58■□□□□ 0.24
C9orf47-202ENST00000375850 DKK2Q9UBU2 259 aa16.58■□□□□ 0.24
C9orf47-202ENST00000375850 CTDSP2O14595 271 aa16.57■□□□□ 0.24
C9orf47-202ENST00000375850 RTL8CO15255 209 aa16.57■□□□□ 0.24
C9orf47-202ENST00000375850 CFDP00746 253 aaPredicted RBP16.57■□□□□ 0.24
C9orf47-202ENST00000375850 MEOX2P50222 304 aa16.57■□□□□ 0.24
C9orf47-202ENST00000375850 EMP1P54849 157 aa16.57■□□□□ 0.24
C9orf47-202ENST00000375850 PAX9P55771 341 aa16.57■□□□□ 0.24
C9orf47-202ENST00000375850 IL18Q14116 193 aa16.57■□□□□ 0.24
C9orf47-202ENST00000375850 GAMTQ14353 236 aa16.57■□□□□ 0.24
C9orf47-202ENST00000375850 ZNF79Q15937 498 aa16.57■□□□□ 0.24
C9orf47-202ENST00000375850 GDF5OSQ5U4N7 250 aa16.57■□□□□ 0.24
C9orf47-202ENST00000375850 EBLN2Q6P2I7 272 aa16.57■□□□□ 0.24
C9orf47-202ENST00000375850 UBE2DNLQ8IWF7 75 aa16.57■□□□□ 0.24
C9orf47-202ENST00000375850 RBKSQ9H477 322 aa16.57■□□□□ 0.24
C9orf47-202ENST00000375850 IGHV3OR16-12A0A075B7B8 117 aa16.56■□□□□ 0.24
C9orf47-202ENST00000375850 ANKRD20A5PA0PJZ0 165 aa16.56■□□□□ 0.24
C9orf47-202ENST00000375850 SOCS3O14543 225 aa16.56■□□□□ 0.24
C9orf47-202ENST00000375850 HBE1P02100 147 aa16.56■□□□□ 0.24
C9orf47-202ENST00000375850 AKR1C4P17516 323 aa16.56■□□□□ 0.24
C9orf47-202ENST00000375850 PSG9Q00887 426 aa16.56■□□□□ 0.24
C9orf47-202ENST00000375850 RNF212Q495C1 297 aa16.56■□□□□ 0.24
C9orf47-202ENST00000375850 SOHLH1Q5JUK2 328 aa16.56■□□□□ 0.24
C9orf47-202ENST00000375850 ZNF709Q8N972 641 aa16.56■□□□□ 0.24
C9orf47-202ENST00000375850 OR4B1Q8NGF8 309 aa16.56■□□□□ 0.24
C9orf47-202ENST00000375850 DIRAS2Q96HU8 199 aa16.56■□□□□ 0.24
C9orf47-202ENST00000375850 SCRT1Q9BWW7 348 aa16.56■□□□□ 0.24
C9orf47-202ENST00000375850 WDR12Q9GZL7 423 aaKnown RBP16.56■□□□□ 0.24
C9orf47-202ENST00000375850 IGKV3-20P01619 116 aa16.55■□□□□ 0.24
C9orf47-202ENST00000375850 RAB11AP62491 216 aa16.55■□□□□ 0.24
C9orf47-202ENST00000375850 ZNF90Q03938 601 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms