RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 GADD45AP24522 165 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 FOXA3P55318 350 aaPredicted RBP7.19□□□□□ -1.26
UBR4-201ENST00000375218 PYDC2Q56P42 97 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 FAM222AQ5U5X8 452 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 PRIMA1Q86XR5 153 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 C20orf78Q9BR46 151 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 PAXXQ9BUH6 204 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 TAC3Q9UHF0 121 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 DOCK10Q96BY6 2186 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 SPTY2D1-AS1A0A0U1RR47 76 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 C5orf49A4QMS7 147 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 MCRIP1C9JLW8 97 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 HYPMO75409 117 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 OR10G8Q8NGN5 311 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 SPRY4Q9C004 299 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 ZNF257Q9Y2Q1 563 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 CD5LO43866 347 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 C1QL1O75973 258 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 SFT2D2O95562 160 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 ZNF85Q03923 595 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 NSUN5P1Q3KNT7 163 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 TEX43Q6ZNM6 134 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 NABP1Q96AH0 204 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 CACNG5Q9UF02 275 aa7.19□□□□□ -1.26
UBR4-201ENST00000375218 DSPPQ9NZW4 1301 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.18□□□□□ -1.26
UBR4-201ENST00000375218 ZNF57Q68EA5 555 aaPredicted RBP7.18□□□□□ -1.26
UBR4-201ENST00000375218 DPPA3Q6W0C5 159 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 IER3IP1Q9Y5U9 82 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 MEIS3P1A6NDR6 274 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 HMGN4O00479 90 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 AQP1P29972 269 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 INSL3P51460 131 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 TAAR3PQ9P1P4 343 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 TRAV27A0A087WT01 109 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 CDC42EP2O14613 210 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 TCRAP04437 139 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 IGLC2P0DOY2 106 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 IGLC3P0DOY3 106 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 ZNF90Q03938 601 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 UBE2NLQ5JXB2 153 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 CEACAM19Q7Z692 300 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 SPACA3Q8IXA5 215 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 ZNF615Q8N8J6 731 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 KCTD12Q96CX2 325 aaKnown RBP7.18□□□□□ -1.26
UBR4-201ENST00000375218 STARD4Q96DR4 205 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 PBOV1Q9GZY1 135 aa7.18□□□□□ -1.26
UBR4-201ENST00000375218 MRPS12O15235 138 aaKnown RBP7.17□□□□□ -1.26
UBR4-201ENST00000375218 TMEM75Q8N9X5 138 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 RBMXL1Q96E39 390 aaKnown RBP7.17□□□□□ -1.26
UBR4-201ENST00000375218 KCNS1Q96KK3 526 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 FREM3P0C091 2139 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 CNTRLQ7Z7A1 2325 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 FXYD6-FXYD2A0A087WZ82 144 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 A0A1B0GXF2 115 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 DAPP51397 102 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 CFHR3Q02985 330 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 LMX1AQ8TE12 382 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 FXYD6Q9H0Q3 95 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 MED12Q93074 2177 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 LYRM1O43325 122 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 PTGDSP41222 190 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 ODF3L1Q8IXM7 274 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 NAP1L6A6NFF2 107 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 TMEM30BQ3MIR4 351 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 Q6ZVQ6 151 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 C1orf158Q8N1D5 194 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 TMEM133Q9H2Q1 129 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 PLA2G2EQ9NZK7 142 aa7.17□□□□□ -1.26
UBR4-201ENST00000375218 TEX50A0A1B0GTY4 177 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 C11orf98E9PRG8 122 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 SS18L1O75177 396 aaPredicted RBP7.16□□□□□ -1.26
UBR4-201ENST00000375218 SDC2P34741 201 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 GFERP55789 205 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 RPS21P63220 83 aaKnown RBP7.16□□□□□ -1.26
UBR4-201ENST00000375218 SRSF3P84103 164 aaKnown RBP7.16□□□□□ -1.26
UBR4-201ENST00000375218 SLC25A26Q70HW3 274 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 FAM19A3Q7Z5A8 133 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 TMEM230Q96A57 120 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 DPH3Q96FX2 82 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 FAUP35544 74 aaKnown RBP7.16□□□□□ -1.26
UBR4-201ENST00000375218 REG3AQ06141 175 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 Q6ZS46 218 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 OR10J6PQ8NGY7 276 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 YPEL4Q96NS1 127 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 LIME1Q9H400 295 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 MDFICQ9P1T7 246 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 LINC00312Q9Y6C7 94 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 CXCL1P09341 107 aa7.16□□□□□ -1.26
UBR4-201ENST00000375218 GPX7Q96SL4 187 aaPredicted RBP7.16□□□□□ -1.26
UBR4-201ENST00000375218 IGHV5-51A0A0C4DH38 117 aa7.15□□□□□ -1.26
UBR4-201ENST00000375218 FAM181BA6NEQ2 426 aa7.15□□□□□ -1.26
UBR4-201ENST00000375218 GP2P55259 537 aaKnown RBP7.15□□□□□ -1.26
UBR4-201ENST00000375218 OCIAD1Q9NX40 245 aa7.15□□□□□ -1.26
UBR4-201ENST00000375218 PIEZO2Q9H5I5 2752 aa7.15□□□□□ -1.26
UBR4-201ENST00000375218 A0A087WZ39 114 aa7.15□□□□□ -1.26
UBR4-201ENST00000375218 IGHV2-26A0A0B4J1V2 119 aa7.15□□□□□ -1.26
UBR4-201ENST00000375218 TRAV13-1A0A0B4J241 112 aa7.15□□□□□ -1.26
UBR4-201ENST00000375218 OPRK1P41145 380 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms