RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 K7ENP7 123 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 NTF3P20783 257 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 SRIP30626 198 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 KRTDAPP60985 99 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 REC114Q7Z4M0 266 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 ATG101Q9BSB4 218 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 NAGKQ9UJ70 344 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 MC5RP33032 325 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 HES1Q14469 280 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 TMEM30BQ3MIR4 351 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 SIGLEC9Q9Y336 463 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 PAM16Q9Y3D7 125 aa13.65□□□□□ -0.22
RXRB-201ENST00000374680 PEX7O00628 323 aa13.64□□□□□ -0.23
RXRB-201ENST00000374680 ZNF253O75346 499 aa13.64□□□□□ -0.23
RXRB-201ENST00000374680 BPIFB3P59826 476 aa13.64□□□□□ -0.23
RXRB-201ENST00000374680 ZNF672Q499Z4 452 aaPredicted RBP13.64□□□□□ -0.23
RXRB-201ENST00000374680 ZNF329Q86UD4 541 aa13.64□□□□□ -0.23
RXRB-201ENST00000374680 FXYD5Q96DB9 178 aa13.64□□□□□ -0.23
RXRB-201ENST00000374680 POLR3KQ9Y2Y1 108 aaPredicted RBP13.64□□□□□ -0.23
RXRB-201ENST00000374680 B9A039 149 aa13.64□□□□□ -0.23
RXRB-201ENST00000374680 PPP1R27Q86WC6 154 aa13.64□□□□□ -0.23
RXRB-201ENST00000374680 BUB1B-PAK6H3BSN5 160 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 MMDQ15546 238 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 OR1L4Q8NGR5 311 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 PRRX1P54821 245 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 UBE2G1P62253 170 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 NUDT10Q8NFP7 164 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 NUDT11Q96G61 164 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 IGF2BP2-AS1Q96M15 143 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 CLEC7AQ9BXN2 247 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 TIMM23O14925 209 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 NBEAP1P0C6P0 100 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 LGALS7P47929 136 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 CX3CL1P78423 397 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 FBLN7Q53RD9 439 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 ZNF841Q6ZN19 808 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 TCF24Q7RTU0 167 aa13.63□□□□□ -0.23
RXRB-201ENST00000374680 ZFHX3Q15911 3703 aa13.62□□□□□ -0.23
RXRB-201ENST00000374680 LINC00311Q8N616 119 aa13.62□□□□□ -0.23
RXRB-201ENST00000374680 TMEM68Q96MH6 324 aa13.62□□□□□ -0.23
RXRB-201ENST00000374680 VKORC1Q9BQB6 163 aa13.62□□□□□ -0.23
RXRB-201ENST00000374680 MRPL32Q9BYC8 188 aaKnown RBP13.62□□□□□ -0.23
RXRB-201ENST00000374680 AMTP48728 403 aa13.62□□□□□ -0.23
RXRB-201ENST00000374680 TPPP2P59282 170 aa13.62□□□□□ -0.23
RXRB-201ENST00000374680 SLAQ13239 276 aa13.62□□□□□ -0.23
RXRB-201ENST00000374680 ZNF705AQ6ZN79 300 aaPredicted RBP13.62□□□□□ -0.23
RXRB-201ENST00000374680 TMEM136Q6ZRR5 245 aa13.62□□□□□ -0.23
RXRB-201ENST00000374680 EXOC3-AS1Q8N2X6 119 aa13.62□□□□□ -0.23
RXRB-201ENST00000374680 SRSF12Q8WXF0 261 aaKnown RBP13.62□□□□□ -0.23
RXRB-201ENST00000374680 C19orf24Q9BVV8 132 aa13.62□□□□□ -0.23
RXRB-201ENST00000374680 ZNF331Q9NQX6 463 aaPredicted RBP13.62□□□□□ -0.23
RXRB-201ENST00000374680 OSTCQ9NRP0 149 aa13.62□□□□□ -0.23
RXRB-201ENST00000374680 KAAG1Q9UBP8 84 aa13.62□□□□□ -0.23
RXRB-201ENST00000374680 IGHV3OR16-8A0A075B7F1 116 aa13.61□□□□□ -0.23
RXRB-201ENST00000374680 HYPMO75409 117 aa13.61□□□□□ -0.23
RXRB-201ENST00000374680 IGLV1-47P01700 117 aa13.61□□□□□ -0.23
RXRB-201ENST00000374680 IGHV3-23P01764 117 aa13.61□□□□□ -0.23
RXRB-201ENST00000374680 PSG1P11464 419 aa13.61□□□□□ -0.23
RXRB-201ENST00000374680 CASP6P55212 293 aa13.61□□□□□ -0.23
RXRB-201ENST00000374680 LINC00322Q6ZN03 302 aaPredicted RBP13.61□□□□□ -0.23
RXRB-201ENST00000374680 WNT10AQ9GZT5 417 aa13.61□□□□□ -0.23
RXRB-201ENST00000374680 CDC42EP3Q9UKI2 254 aa13.61□□□□□ -0.23
RXRB-201ENST00000374680 EREGO14944 169 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 C22orf15Q8WYQ4 148 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 IGHV3-35A0A0C4DH35 117 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 A6NNC1 897 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 NDUFS7O75251 213 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 ATP5IP56385 69 aaPredicted RBP13.6□□□□□ -0.23
RXRB-201ENST00000374680 ATOH7Q8N100 152 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 SIGLECL1Q8N7X8 197 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 OR2D3Q8NGH3 330 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 C17orf77Q96MU5 243 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 BMPR1BO00238 502 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 COMPP49747 757 aaPredicted RBP13.6□□□□□ -0.23
RXRB-201ENST00000374680 OR4A5Q8NH83 315 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 PERPQ96FX8 193 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 EPDR1Q9UM22 224 aa13.6□□□□□ -0.23
RXRB-201ENST00000374680 VPS13CQ709C8 3753 aa13.59□□□□□ -0.23
RXRB-201ENST00000374680 FSTL3O95633 263 aa13.59□□□□□ -0.23
RXRB-201ENST00000374680 ZNF137PP52743 207 aa13.59□□□□□ -0.23
RXRB-201ENST00000374680 BCL6BQ8N143 479 aaPredicted RBP13.59□□□□□ -0.23
RXRB-201ENST00000374680 NUP35Q8NFH5 326 aa13.59□□□□□ -0.23
RXRB-201ENST00000374680 LY96Q9Y6Y9 160 aa13.59□□□□□ -0.23
RXRB-201ENST00000374680 HIGD1CA8MV81 97 aa13.59□□□□□ -0.23
RXRB-201ENST00000374680 APCSP02743 223 aa13.59□□□□□ -0.23
RXRB-201ENST00000374680 SELENOTP62341 195 aa13.59□□□□□ -0.23
RXRB-201ENST00000374680 BATFQ16520 125 aa13.59□□□□□ -0.23
RXRB-201ENST00000374680 GDF5OSQ5U4N7 250 aa13.59□□□□□ -0.23
RXRB-201ENST00000374680 FBXL7Q9UJT9 491 aa13.59□□□□□ -0.23
RXRB-201ENST00000374680 TBL2Q9Y4P3 447 aaKnown RBP13.59□□□□□ -0.23
RXRB-201ENST00000374680 TIMM8BQ9Y5J9 83 aaPredicted RBP13.59□□□□□ -0.23
RXRB-201ENST00000374680 M0QZ24 198 aa13.58□□□□□ -0.24
RXRB-201ENST00000374680 TEX45Q8NA69 505 aa13.58□□□□□ -0.24
RXRB-201ENST00000374680 NEU1Q99519 415 aa13.58□□□□□ -0.24
RXRB-201ENST00000374680 GNB1LQ9BYB4 327 aa13.58□□□□□ -0.24
RXRB-201ENST00000374680 FOXA3P55318 350 aaPredicted RBP13.58□□□□□ -0.24
RXRB-201ENST00000374680 NCBP2LA6PVI3 153 aaKnown RBP13.57□□□□□ -0.24
RXRB-201ENST00000374680 VWC2LB2RUY7 222 aa13.57□□□□□ -0.24
RXRB-201ENST00000374680 TEX22C9J3V5 150 aa13.57□□□□□ -0.24
RXRB-201ENST00000374680 THAP8Q8NA92 274 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms