RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 OR51G1Q8NGK1 321 aa15.86■□□□□ 0.13
CCDC28B-201ENST00000373602 IGKV1D-37A0A075B6S9 117 aa15.85■□□□□ 0.13
CCDC28B-201ENST00000373602 RNF125Q96EQ8 232 aa15.85■□□□□ 0.13
CCDC28B-201ENST00000373602 SLC35E1Q96K37 410 aa15.85■□□□□ 0.13
CCDC28B-201ENST00000373602 C11orf68Q9H3H3 251 aaKnown RBP15.85■□□□□ 0.13
CCDC28B-201ENST00000373602 KNCNA6PVL3 124 aa15.84■□□□□ 0.13
CCDC28B-201ENST00000373602 MED6O75586 246 aa15.84■□□□□ 0.13
CCDC28B-201ENST00000373602 GIG44P09565 113 aaPredicted RBP15.84■□□□□ 0.13
CCDC28B-201ENST00000373602 IAPPP10997 89 aa15.84■□□□□ 0.13
CCDC28B-201ENST00000373602 AGRNO00468 2067 aa15.83■□□□□ 0.13
CCDC28B-201ENST00000373602 ZFP92A6NM28 416 aa15.83■□□□□ 0.12
CCDC28B-201ENST00000373602 SPP1P10451 314 aa15.83■□□□□ 0.12
CCDC28B-201ENST00000373602 UBE2MP61081 183 aaKnown RBP15.83■□□□□ 0.12
CCDC28B-201ENST00000373602 RAB11AP62491 216 aa15.83■□□□□ 0.12
CCDC28B-201ENST00000373602 BAK1Q16611 211 aa15.83■□□□□ 0.12
CCDC28B-201ENST00000373602 TMEM41BQ5BJD5 291 aa15.83■□□□□ 0.12
CCDC28B-201ENST00000373602 MORN3Q6PF18 240 aaPredicted RBP15.83■□□□□ 0.12
CCDC28B-201ENST00000373602 SIGLEC15Q6ZMC9 328 aa15.83■□□□□ 0.12
CCDC28B-201ENST00000373602 LINC00476Q8WZB0 136 aa15.83■□□□□ 0.12
CCDC28B-201ENST00000373602 SEPSECSQ9HD40 501 aaKnown RBP15.83■□□□□ 0.12
CCDC28B-201ENST00000373602 KLK5Q9Y337 293 aaPredicted RBP15.83■□□□□ 0.12
CCDC28B-201ENST00000373602 NAP1L6A6NFF2 107 aa15.82■□□□□ 0.12
CCDC28B-201ENST00000373602 HOXB5P09067 269 aa15.82■□□□□ 0.12
CCDC28B-201ENST00000373602 ZNF90Q03938 601 aa15.82■□□□□ 0.12
CCDC28B-201ENST00000373602 PSMG4Q5JS54 123 aa15.82■□□□□ 0.12
CCDC28B-201ENST00000373602 ACTL10Q5JWF8 245 aa15.82■□□□□ 0.12
CCDC28B-201ENST00000373602 OR8G2PQ6IF36 304 aa15.82■□□□□ 0.12
CCDC28B-201ENST00000373602 CIB3Q96Q77 187 aaPredicted RBP15.82■□□□□ 0.12
CCDC28B-201ENST00000373602 NRN1Q9NPD7 142 aa15.82■□□□□ 0.12
CCDC28B-201ENST00000373602 HYDINQ4G0P3 5121 aa15.82■□□□□ 0.12
CCDC28B-201ENST00000373602 SYNGR2O43760 224 aa15.81■□□□□ 0.12
CCDC28B-201ENST00000373602 NUP62P37198 522 aaPredicted RBP15.81■□□□□ 0.12
CCDC28B-201ENST00000373602 GGNBP1Q5YKI7 109 aa15.81■□□□□ 0.12
CCDC28B-201ENST00000373602 TRIQKQ629K1 86 aa15.81■□□□□ 0.12
CCDC28B-201ENST00000373602 PHLDA1Q8WV24 401 aaPredicted RBP15.81■□□□□ 0.12
CCDC28B-201ENST00000373602 RAB40CQ96S21 281 aa15.81■□□□□ 0.12
CCDC28B-201ENST00000373602 PBDC1Q9BVG4 233 aa15.81■□□□□ 0.12
CCDC28B-201ENST00000373602 MAGT1Q9H0U3 335 aa15.81■□□□□ 0.12
CCDC28B-201ENST00000373602 PFDN2Q9UHV9 154 aa15.81■□□□□ 0.12
CCDC28B-201ENST00000373602 NDUFB6O95139 128 aa15.8■□□□□ 0.12
CCDC28B-201ENST00000373602 FABP1P07148 127 aa15.8■□□□□ 0.12
CCDC28B-201ENST00000373602 C4BPBP20851 252 aa15.8■□□□□ 0.12
CCDC28B-201ENST00000373602 INPP1P49441 399 aa15.8■□□□□ 0.12
CCDC28B-201ENST00000373602 SNRPD3P62318 126 aaKnown RBP15.8■□□□□ 0.12
CCDC28B-201ENST00000373602 RPP30P78346 268 aaKnown RBP15.8■□□□□ 0.12
CCDC28B-201ENST00000373602 C11orf45Q8TAV5 145 aa15.8■□□□□ 0.12
CCDC28B-201ENST00000373602 TRGV9Q99603 122 aa15.8■□□□□ 0.12
CCDC28B-201ENST00000373602 PAIP2BQ9ULR5 123 aaKnown RBP15.8■□□□□ 0.12
CCDC28B-201ENST00000373602 C9orf170A2RU37 121 aa15.79■□□□□ 0.12
CCDC28B-201ENST00000373602 PRSS46E5RG02 174 aa15.79■□□□□ 0.12
CCDC28B-201ENST00000373602 THAP8Q8NA92 274 aa15.79■□□□□ 0.12
CCDC28B-201ENST00000373602 SDHCQ99643 169 aaPredicted RBP15.79■□□□□ 0.12
CCDC28B-201ENST00000373602 MFFQ9GZY8 342 aa15.79■□□□□ 0.12
CCDC28B-201ENST00000373602 IGKV1OR2-108A0A075B7D4 117 aa15.78■□□□□ 0.12
CCDC28B-201ENST00000373602 SNRPGP15A8MWD9 76 aa15.78■□□□□ 0.12
CCDC28B-201ENST00000373602 WRBO00258 174 aa15.78■□□□□ 0.12
CCDC28B-201ENST00000373602 DEFB4AO15263 64 aa15.78■□□□□ 0.12
CCDC28B-201ENST00000373602 NANOS2P60321 138 aaKnown RBP15.78■□□□□ 0.12
CCDC28B-201ENST00000373602 LYZP61626 148 aa15.78■□□□□ 0.12
CCDC28B-201ENST00000373602 Q8NAQ8 132 aa15.78■□□□□ 0.12
CCDC28B-201ENST00000373602 LY6G6CO95867 125 aa15.77■□□□□ 0.12
CCDC28B-201ENST00000373602 OR2F1Q13607 317 aa15.77■□□□□ 0.12
CCDC28B-201ENST00000373602 C1orf194Q5T5A4 169 aa15.77■□□□□ 0.12
CCDC28B-201ENST00000373602 FLVCR2Q9UPI3 526 aa15.77■□□□□ 0.12
CCDC28B-201ENST00000373602 ZNF705EA8MWA4 302 aaPredicted RBP15.76■□□□□ 0.11
CCDC28B-201ENST00000373602 ADAP1O75689 374 aa15.76■□□□□ 0.11
CCDC28B-201ENST00000373602 ID3Q02535 119 aa15.76■□□□□ 0.11
CCDC28B-201ENST00000373602 CSNK1G2-AS1Q8NCQ2 148 aa15.76■□□□□ 0.11
CCDC28B-201ENST00000373602 FBXL17Q9UF56 701 aa15.76■□□□□ 0.11
CCDC28B-201ENST00000373602 LINC00854A0A1B0GVQ3 168 aa15.75■□□□□ 0.11
CCDC28B-201ENST00000373602 H3BMM0 161 aa15.75■□□□□ 0.11
CCDC28B-201ENST00000373602 OR4E1P0C645 316 aa15.75■□□□□ 0.11
CCDC28B-201ENST00000373602 MIFP14174 115 aa15.75■□□□□ 0.11
CCDC28B-201ENST00000373602 BTCP35070 178 aa15.75■□□□□ 0.11
CCDC28B-201ENST00000373602 SPANXN5Q5MJ07 72 aa15.75■□□□□ 0.11
CCDC28B-201ENST00000373602 COQ8AQ8NI60 647 aa15.75■□□□□ 0.11
CCDC28B-201ENST00000373602 C7orf50Q9BRJ6 194 aaKnown RBP15.75■□□□□ 0.11
CCDC28B-201ENST00000373602 X6R8D5 127 aa15.75■□□□□ 0.11
CCDC28B-201ENST00000373602 IGHV4-28A0A0C4DH34 117 aa15.74■□□□□ 0.11
CCDC28B-201ENST00000373602 CENPXA8MT69 81 aa15.74■□□□□ 0.11
CCDC28B-201ENST00000373602 CFDP00746 253 aaPredicted RBP15.74■□□□□ 0.11
CCDC28B-201ENST00000373602 RBMY1A1P0DJD3 496 aaKnown RBP15.74■□□□□ 0.11
CCDC28B-201ENST00000373602 RBMY1CP0DJD4 496 aa15.74■□□□□ 0.11
CCDC28B-201ENST00000373602 NKX2-1P43699 371 aaPredicted RBP15.74■□□□□ 0.11
CCDC28B-201ENST00000373602 RBMY1FQ15415 496 aaKnown RBP15.74■□□□□ 0.11
CCDC28B-201ENST00000373602 WDR12Q9GZL7 423 aaKnown RBP15.74■□□□□ 0.11
CCDC28B-201ENST00000373602 CLEC5AQ9NY25 188 aa15.74■□□□□ 0.11
CCDC28B-201ENST00000373602 STRAPQ9Y3F4 350 aaKnown RBP15.74■□□□□ 0.11
CCDC28B-201ENST00000373602 H3BP45 60 aa15.73■□□□□ 0.11
CCDC28B-201ENST00000373602 HLA-DRB4P13762 266 aa15.73■□□□□ 0.11
CCDC28B-201ENST00000373602 NUTF2P61970 127 aaKnown RBP15.73■□□□□ 0.11
CCDC28B-201ENST00000373602 POLR2GP62487 172 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCDC28B-201ENST00000373602 OR4D5Q8NGN0 318 aa15.73■□□□□ 0.11
CCDC28B-201ENST00000373602 PPP1R14BQ96C90 147 aa15.73■□□□□ 0.11
CCDC28B-201ENST00000373602 HRH4Q9H3N8 390 aa15.73■□□□□ 0.11
CCDC28B-201ENST00000373602 TBC1D24Q9ULP9 559 aa15.73■□□□□ 0.11
CCDC28B-201ENST00000373602 HLA-DRB4X5D2U9 266 aa15.73■□□□□ 0.11
CCDC28B-201ENST00000373602 SOCS3O14543 225 aa15.72■□□□□ 0.11
CCDC28B-201ENST00000373602 IFNA21P01568 189 aa15.72■□□□□ 0.11
CCDC28B-201ENST00000373602 IL7P13232 177 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms