RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 APOA2P02652 100 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 ACP1P24666 158 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 PRDX2P32119 198 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 LOXL3P58215 753 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 ERVK-16P61578 105 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 TBC1D28Q2M2D7 210 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 SMIM21Q3B7S5 101 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 PATE2Q6UY27 113 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 ZCCHC24Q8N2G6 241 aaKnown RBP4.38□□□□□ -1.71
ATG4A-204ENST00000372246 FAM110AQ9BQ89 295 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 ZNF576Q9H609 170 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 OSTCQ9NRP0 149 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 IDI2-AS1Q9NZ38 188 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 AMMECR1Q9Y4X0 333 aaPredicted RBP4.38□□□□□ -1.71
ATG4A-204ENST00000372246 OR51B2Q9Y5P1 312 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 TNFRSF18Q9Y5U5 241 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 LOC389332A0A1B0GUA5 103 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 H3BUT2 72 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 J3QR06 171 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 K7ESF4 209 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 DNPH1O43598 174 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 ORM2P19652 201 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 LRRC10Q5BKY1 277 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 CIARTQ8N365 385 aaPredicted RBP4.38□□□□□ -1.71
ATG4A-204ENST00000372246 CACNG8Q8WXS5 425 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 NPIPB3Q92617 1050 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 FLYWCH2Q96CP2 140 aaKnown RBP4.38□□□□□ -1.71
ATG4A-204ENST00000372246 FAM167A-AS1Q96KT0 104 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 SLC25A33Q9BSK2 321 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 SPRR3Q9UBC9 169 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 TNRC6BQ9UPQ9 1833 aaKnown RBP4.38□□□□□ -1.71
ATG4A-204ENST00000372246 F11RQ9Y624 299 aaKnown RBP4.38□□□□□ -1.71
ATG4A-204ENST00000372246 PLCE1Q9P212 2302 aa4.38□□□□□ -1.71
ATG4A-204ENST00000372246 IGHV3-72A0A0B4J1Y9 119 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 C7orf71A4D174 169 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 A4D1N5 150 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 C15orf61A6NNL5 157 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 LEPROTL1O95214 131 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 WT1P19544 449 aaPredicted RBP4.37□□□□□ -1.71
ATG4A-204ENST00000372246 C2orf91Q6ZV80 131 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 FAM90A1Q86YD7 464 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 OR1N2Q8NGR9 330 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 LINC00470Q9BZP3 86 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 ENY2Q9NPA8 101 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 A0A1W2PNU3 283 aaPredicted RBP4.37□□□□□ -1.71
ATG4A-204ENST00000372246 SPRY3O43610 288 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 GNG7O60262 68 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 MPDU1O75352 247 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 MT-ND6P03923 174 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 MEOX1P50221 254 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 HSPE1P61604 102 aaKnown RBP4.37□□□□□ -1.71
ATG4A-204ENST00000372246 MEF2CQ06413 473 aaPredicted RBP4.37□□□□□ -1.71
ATG4A-204ENST00000372246 SRSF6Q13247 344 aaKnown RBP4.37□□□□□ -1.71
ATG4A-204ENST00000372246 SLC25A34Q6PIV7 304 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 ZNF329Q86UD4 541 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 MOGAT3Q86VF5 341 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 DEFB125Q8N687 156 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 OR1B1Q8NGR6 318 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 RITA1Q96K30 269 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 CHODLQ9H9P2 273 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 HIF1ANQ9NWT6 349 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 PIEZO2Q9H5I5 2752 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 DSCAMO60469 2012 aa4.37□□□□□ -1.71
ATG4A-204ENST00000372246 TMSB15BA0A087X1C1 80 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 TRBV9A0A0B4J1U6 114 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 TEX50A0A1B0GTY4 177 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 PGPA6NDG6 321 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 K7ERJ3 54 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 PEX7O00628 323 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 MT-CO2P00403 227 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 HLA-DRB1P01911 266 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 SLC25A5P05141 298 aaKnown RBP4.36□□□□□ -1.71
ATG4A-204ENST00000372246 FAM87AP0C7U9 286 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 CXCL12P48061 93 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 RHOGP84095 191 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 RBPJQ06330 500 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 IL11RAQ14626 422 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 TMEM249Q2WGJ8 235 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 ABHD17BQ5VST6 288 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 HCP5Q6MZN7 132 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 FAM216BQ8N7L0 139 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 ZBTB34Q8NCN2 500 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 OR8A1Q8NGG7 326 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 OR4A5Q8NH83 315 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 C18orf15Q96N68 181 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 OR2V2Q96R30 315 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 SCRT2Q9NQ03 307 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 TMEM14BQ9NUH8 114 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 BOKQ9UMX3 212 aaPredicted RBP4.36□□□□□ -1.71
ATG4A-204ENST00000372246 S4R3C0 116 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 FNDC10F2Z333 226 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 SAA1P0DJI8 122 aaPredicted RBP4.36□□□□□ -1.71
ATG4A-204ENST00000372246 C8orf88P0DMB2 117 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 TMPRSS3P57727 454 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 KIR3DS1Q14943 382 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 TMEM177Q53S58 311 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 EXOC3-AS1Q8N2X6 119 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 GCSAMQ8N6F7 178 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 DDB2Q92466 427 aa4.36□□□□□ -1.71
ATG4A-204ENST00000372246 C17orf77Q96MU5 243 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms