RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 GAMTQ14353 236 aa12.47□□□□□ -0.41
LRRC42-202ENST00000371368 ACTL10Q5JWF8 245 aa12.47□□□□□ -0.41
LRRC42-202ENST00000371368 SLC35E1Q96K37 410 aa12.47□□□□□ -0.41
LRRC42-202ENST00000371368 ZFP92A6NM28 416 aa12.46□□□□□ -0.41
LRRC42-202ENST00000371368 DEFB4AO15263 64 aa12.46□□□□□ -0.41
LRRC42-202ENST00000371368 SFT2D2O95562 160 aa12.46□□□□□ -0.41
LRRC42-202ENST00000371368 IAPPP10997 89 aa12.46□□□□□ -0.41
LRRC42-202ENST00000371368 NANOS2P60321 138 aaKnown RBP12.46□□□□□ -0.41
LRRC42-202ENST00000371368 RAB11AP62491 216 aa12.46□□□□□ -0.41
LRRC42-202ENST00000371368 PSMG4Q5JS54 123 aa12.46□□□□□ -0.41
LRRC42-202ENST00000371368 MORN3Q6PF18 240 aaPredicted RBP12.46□□□□□ -0.41
LRRC42-202ENST00000371368 SIGLEC15Q6ZMC9 328 aa12.46□□□□□ -0.41
LRRC42-202ENST00000371368 C11orf45Q8TAV5 145 aa12.46□□□□□ -0.41
LRRC42-202ENST00000371368 RAB40CQ96S21 281 aa12.46□□□□□ -0.41
LRRC42-202ENST00000371368 TMED3Q9Y3Q3 217 aa12.46□□□□□ -0.41
LRRC42-202ENST00000371368 IGKV1D-37A0A075B6S9 117 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 FAM90A26D6RGX4 464 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 SPP1P10451 314 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 ZNF90Q03938 601 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 PPP1R1AQ13522 171 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 TMEM41BQ5BJD5 291 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 SPANXN2Q5MJ10 180 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 CENPSQ8N2Z9 138 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 RNF125Q96EQ8 232 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 PBDC1Q9BVG4 233 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 MFFQ9GZY8 342 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 NRN1Q9NPD7 142 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 HYDINQ4G0P3 5121 aa12.45□□□□□ -0.42
LRRC42-202ENST00000371368 ZNF701M0R085 212 aaPredicted RBP12.44□□□□□ -0.42
LRRC42-202ENST00000371368 MED6O75586 246 aa12.44□□□□□ -0.42
LRRC42-202ENST00000371368 HOXB5P09067 269 aa12.44□□□□□ -0.42
LRRC42-202ENST00000371368 C4BPBP20851 252 aa12.44□□□□□ -0.42
LRRC42-202ENST00000371368 SNRPD3P62318 126 aaKnown RBP12.44□□□□□ -0.42
LRRC42-202ENST00000371368 MAGT1Q9H0U3 335 aa12.44□□□□□ -0.42
LRRC42-202ENST00000371368 SEPSECSQ9HD40 501 aaKnown RBP12.44□□□□□ -0.42
LRRC42-202ENST00000371368 PFDN2Q9UHV9 154 aa12.44□□□□□ -0.42
LRRC42-202ENST00000371368 PAIP2BQ9ULR5 123 aaKnown RBP12.44□□□□□ -0.42
LRRC42-202ENST00000371368 AGRNO00468 2067 aa12.43□□□□□ -0.42
LRRC42-202ENST00000371368 GGNBP1Q5YKI7 109 aa12.43□□□□□ -0.42
LRRC42-202ENST00000371368 OR8G2PQ6IF36 304 aa12.43□□□□□ -0.42
LRRC42-202ENST00000371368 SRRQ9GZT4 340 aa12.43□□□□□ -0.42
LRRC42-202ENST00000371368 FBXL17Q9UF56 701 aa12.43□□□□□ -0.42
LRRC42-202ENST00000371368 SNRPGP15A8MWD9 76 aa12.42□□□□□ -0.42
LRRC42-202ENST00000371368 WRBO00258 174 aa12.42□□□□□ -0.42
LRRC42-202ENST00000371368 SYNGR2O43760 224 aa12.42□□□□□ -0.42
LRRC42-202ENST00000371368 FABP1P07148 127 aa12.42□□□□□ -0.42
LRRC42-202ENST00000371368 NUP62P37198 522 aaPredicted RBP12.42□□□□□ -0.42
LRRC42-202ENST00000371368 INPP1P49441 399 aa12.42□□□□□ -0.42
LRRC42-202ENST00000371368 UBE2MP61081 183 aaKnown RBP12.42□□□□□ -0.42
LRRC42-202ENST00000371368 LYZP61626 148 aa12.42□□□□□ -0.42
LRRC42-202ENST00000371368 OR2F1Q13607 317 aa12.42□□□□□ -0.42
LRRC42-202ENST00000371368 BAK1Q16611 211 aa12.42□□□□□ -0.42
LRRC42-202ENST00000371368 Q8NAQ8 132 aa12.42□□□□□ -0.42
LRRC42-202ENST00000371368 CIB3Q96Q77 187 aaPredicted RBP12.42□□□□□ -0.42
LRRC42-202ENST00000371368 TRGV9Q99603 122 aa12.42□□□□□ -0.42
LRRC42-202ENST00000371368 IGHV4-28A0A0C4DH34 117 aa12.41□□□□□ -0.42
LRRC42-202ENST00000371368 NAP1L6A6NFF2 107 aa12.41□□□□□ -0.42
LRRC42-202ENST00000371368 ZNF705EA8MWA4 302 aaPredicted RBP12.41□□□□□ -0.42
LRRC42-202ENST00000371368 RBMY1A1P0DJD3 496 aaKnown RBP12.41□□□□□ -0.42
LRRC42-202ENST00000371368 RBMY1CP0DJD4 496 aa12.41□□□□□ -0.42
LRRC42-202ENST00000371368 RPP30P78346 268 aaKnown RBP12.41□□□□□ -0.42
LRRC42-202ENST00000371368 RBMY1FQ15415 496 aaKnown RBP12.41□□□□□ -0.42
LRRC42-202ENST00000371368 TRIQKQ629K1 86 aa12.41□□□□□ -0.42
LRRC42-202ENST00000371368 THAP8Q8NA92 274 aa12.41□□□□□ -0.42
LRRC42-202ENST00000371368 CSNK1G2-AS1Q8NCQ2 148 aa12.41□□□□□ -0.42
LRRC42-202ENST00000371368 CLEC5AQ9NY25 188 aa12.41□□□□□ -0.42
LRRC42-202ENST00000371368 IGKV1OR2-108A0A075B7D4 117 aa12.4□□□□□ -0.42
LRRC42-202ENST00000371368 C9orf170A2RU37 121 aa12.4□□□□□ -0.42
LRRC42-202ENST00000371368 MIFP14174 115 aa12.4□□□□□ -0.42
LRRC42-202ENST00000371368 C1orf194Q5T5A4 169 aa12.4□□□□□ -0.42
LRRC42-202ENST00000371368 X6R8D5 127 aa12.4□□□□□ -0.42
LRRC42-202ENST00000371368 EPPK1P58107 5090 aaKnown RBP12.4□□□□□ -0.42
LRRC42-202ENST00000371368 PRSS46E5RG02 174 aa12.39□□□□□ -0.43
LRRC42-202ENST00000371368 H3BMM0 161 aa12.39□□□□□ -0.43
LRRC42-202ENST00000371368 ADAP1O75689 374 aa12.39□□□□□ -0.43
LRRC42-202ENST00000371368 NDUFB6O95139 128 aa12.39□□□□□ -0.43
LRRC42-202ENST00000371368 NKX2-1P43699 371 aaPredicted RBP12.39□□□□□ -0.43
LRRC42-202ENST00000371368 NUTF2P61970 127 aaKnown RBP12.39□□□□□ -0.43
LRRC42-202ENST00000371368 TBC1D24Q9ULP9 559 aa12.39□□□□□ -0.43
LRRC42-202ENST00000371368 FLVCR2Q9UPI3 526 aa12.39□□□□□ -0.43
LRRC42-202ENST00000371368 LINC00854A0A1B0GVQ3 168 aa12.38□□□□□ -0.43
LRRC42-202ENST00000371368 CFDP00746 253 aaPredicted RBP12.38□□□□□ -0.43
LRRC42-202ENST00000371368 ID1P41134 155 aa12.38□□□□□ -0.43
LRRC42-202ENST00000371368 ID3Q02535 119 aa12.38□□□□□ -0.43
LRRC42-202ENST00000371368 SPANXN5Q5MJ07 72 aa12.38□□□□□ -0.43
LRRC42-202ENST00000371368 C2CD4CQ8TF44 421 aa12.38□□□□□ -0.43
LRRC42-202ENST00000371368 PPP1R14BQ96C90 147 aa12.38□□□□□ -0.43
LRRC42-202ENST00000371368 LINC00052Q96N35 136 aa12.38□□□□□ -0.43
LRRC42-202ENST00000371368 SDHCQ99643 169 aaPredicted RBP12.38□□□□□ -0.43
LRRC42-202ENST00000371368 C1QTNF4Q9BXJ3 329 aa12.38□□□□□ -0.43
LRRC42-202ENST00000371368 WDR12Q9GZL7 423 aaKnown RBP12.38□□□□□ -0.43
LRRC42-202ENST00000371368 HRH4Q9H3N8 390 aa12.38□□□□□ -0.43
LRRC42-202ENST00000371368 STRAPQ9Y3F4 350 aaKnown RBP12.38□□□□□ -0.43
LRRC42-202ENST00000371368 HLA-DRB4P13762 266 aa12.37□□□□□ -0.43
LRRC42-202ENST00000371368 LGALS9CQ6DKI2 356 aa12.37□□□□□ -0.43
LRRC42-202ENST00000371368 OR8I2Q8N0Y5 310 aa12.37□□□□□ -0.43
LRRC42-202ENST00000371368 XCL2Q9UBD3 114 aa12.37□□□□□ -0.43
LRRC42-202ENST00000371368 HLA-DRB4X5D2U9 266 aa12.37□□□□□ -0.43
LRRC42-202ENST00000371368 ELOA3CA0A087WX78 387 aaPredicted RBP12.36□□□□□ -0.43
LRRC42-202ENST00000371368 CENPXA8MT69 81 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms