RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 TEPPQ6URK8 271 aa10.43□□□□□ -0.74
SSR4-202ENST00000370085 BTNL8Q6UX41 500 aa10.43□□□□□ -0.74
SSR4-202ENST00000370085 TMEM252Q8N6L7 170 aa10.43□□□□□ -0.74
SSR4-202ENST00000370085 BPIFCQ8NFQ6 507 aa10.43□□□□□ -0.74
SSR4-202ENST00000370085 THAP6Q8TBB0 222 aa10.43□□□□□ -0.74
SSR4-202ENST00000370085 RHPN1-AS1Q9BWJ2 59 aa10.43□□□□□ -0.74
SSR4-202ENST00000370085 ZFAND3Q9H8U3 227 aa10.43□□□□□ -0.74
SSR4-202ENST00000370085 AURKAIP1Q9NWT8 199 aaPredicted RBP10.43□□□□□ -0.74
SSR4-202ENST00000370085 SMPXQ9UHP9 88 aa10.43□□□□□ -0.74
SSR4-202ENST00000370085 PMS2P5A8MQ11 134 aa10.42□□□□□ -0.74
SSR4-202ENST00000370085 PAFAH1B2P68402 229 aa10.42□□□□□ -0.74
SSR4-202ENST00000370085 FCN2Q15485 313 aa10.42□□□□□ -0.74
SSR4-202ENST00000370085 GUCA2BQ16661 112 aa10.42□□□□□ -0.74
SSR4-202ENST00000370085 HAPLN4Q86UW8 402 aa10.42□□□□□ -0.74
SSR4-202ENST00000370085 TMEM217Q8N7C4 229 aa10.42□□□□□ -0.74
SSR4-202ENST00000370085 RNF125Q96EQ8 232 aa10.42□□□□□ -0.74
SSR4-202ENST00000370085 PBDC1Q9BVG4 233 aa10.42□□□□□ -0.74
SSR4-202ENST00000370085 C11orf1Q9H5F2 150 aa10.42□□□□□ -0.74
SSR4-202ENST00000370085 UQCC1Q9NVA1 299 aa10.42□□□□□ -0.74
SSR4-202ENST00000370085 MLXQ9UH92 298 aa10.42□□□□□ -0.74
SSR4-202ENST00000370085 RABAC1Q9UI14 185 aa10.42□□□□□ -0.74
SSR4-202ENST00000370085 HNRNPCP07910 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
SSR4-202ENST00000370085 GIPP09681 153 aaPredicted RBP10.41□□□□□ -0.74
SSR4-202ENST00000370085 CXCL3P19876 107 aa10.41□□□□□ -0.74
SSR4-202ENST00000370085 RAP2BP61225 183 aa10.41□□□□□ -0.74
SSR4-202ENST00000370085 ZNF90Q03938 601 aa10.41□□□□□ -0.74
SSR4-202ENST00000370085 ADAMTSL5Q6ZMM2 481 aa10.41□□□□□ -0.74
SSR4-202ENST00000370085 MRAPQ8TCY5 172 aa10.41□□□□□ -0.74
SSR4-202ENST00000370085 PRR25Q96S07 402 aa10.41□□□□□ -0.74
SSR4-202ENST00000370085 TMEM147Q9BVK8 224 aa10.41□□□□□ -0.74
SSR4-202ENST00000370085 OR5AC2Q9NZP5 309 aa10.41□□□□□ -0.74
SSR4-202ENST00000370085 IGKV1D-37A0A075B6S9 117 aa10.4□□□□□ -0.74
SSR4-202ENST00000370085 IGSF23A1L1A6 192 aa10.4□□□□□ -0.74
SSR4-202ENST00000370085 CHEK1O14757 476 aa10.4□□□□□ -0.74
SSR4-202ENST00000370085 CCNKO75909 580 aa10.4□□□□□ -0.74
SSR4-202ENST00000370085 PRB2P02812 416 aaPredicted RBP10.4□□□□□ -0.74
SSR4-202ENST00000370085 CRYBB3P26998 211 aa10.4□□□□□ -0.74
SSR4-202ENST00000370085 LYZP61626 148 aa10.4□□□□□ -0.74
SSR4-202ENST00000370085 DEFB121Q5J5C9 76 aa10.4□□□□□ -0.74
SSR4-202ENST00000370085 CYP2G1PQ6ZSU1 146 aa10.4□□□□□ -0.74
SSR4-202ENST00000370085 ZNF546Q86UE3 836 aa10.4□□□□□ -0.74
SSR4-202ENST00000370085 OR11H7Q8NGC8 314 aa10.4□□□□□ -0.74
SSR4-202ENST00000370085 PPP1R14BQ96C90 147 aa10.4□□□□□ -0.74
SSR4-202ENST00000370085 SPAG8Q99932 426 aaPredicted RBP10.4□□□□□ -0.74
SSR4-202ENST00000370085 RNF24Q9Y225 148 aa10.4□□□□□ -0.74
SSR4-202ENST00000370085 IGKV1OR2-108A0A075B7D4 117 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 IGHV3-49A0A0A0MS15 119 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 WI2-2373I1.2A0A1W2PRP0 233 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 HELTA6NFD8 242 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 OR4C46A6NHA9 309 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 TSPAN4O14817 238 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 EDN2P20800 178 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 AP2S1P53680 142 aaPredicted RBP10.39□□□□□ -0.75
SSR4-202ENST00000370085 RPL11P62913 178 aaKnown RBP10.39□□□□□ -0.75
SSR4-202ENST00000370085 EWSR1Q01844 656 aaKnown RBP eCLIP10.39□□□□□ -0.75
SSR4-202ENST00000370085 ARL16Q0P5N6 197 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 OR2F1Q13607 317 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 TMEM61Q8N0U2 210 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 VSIRQ9H7M9 311 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 MBD2Q9UBB5 411 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 SLC45A2Q9UMX9 530 aa10.39□□□□□ -0.75
SSR4-202ENST00000370085 IZUMO1RA6ND01 250 aa10.38□□□□□ -0.75
SSR4-202ENST00000370085 H0YIZ8 118 aa10.38□□□□□ -0.75
SSR4-202ENST00000370085 MPDU1O75352 247 aa10.38□□□□□ -0.75
SSR4-202ENST00000370085 RPL12P30050 165 aaKnown RBP10.38□□□□□ -0.75
SSR4-202ENST00000370085 USF2Q15853 346 aaPredicted RBP10.38□□□□□ -0.75
SSR4-202ENST00000370085 PXDC1Q5TGL8 231 aa10.38□□□□□ -0.75
SSR4-202ENST00000370085 TCF24Q7RTU0 167 aa10.38□□□□□ -0.75
SSR4-202ENST00000370085 OR5C1Q8NGR4 320 aa10.38□□□□□ -0.75
SSR4-202ENST00000370085 ST8SIA2Q92186 375 aa10.38□□□□□ -0.75
SSR4-202ENST00000370085 WDR89Q96FK6 387 aaPredicted RBP10.38□□□□□ -0.75
SSR4-202ENST00000370085 RNF2Q99496 336 aa10.38□□□□□ -0.75
SSR4-202ENST00000370085 RNF126Q9BV68 326 aa10.38□□□□□ -0.75
SSR4-202ENST00000370085 FBXL17Q9UF56 701 aa10.38□□□□□ -0.75
SSR4-202ENST00000370085 SMAD5-AS1Q9Y6J3 95 aa10.38□□□□□ -0.75
SSR4-202ENST00000370085 IGHV3OR16-13A0A075B7E8 117 aa10.37□□□□□ -0.75
SSR4-202ENST00000370085 IGHV3-74A0A0B4J1X5 117 aa10.37□□□□□ -0.75
SSR4-202ENST00000370085 UBE2L5PA0A1B0GUS4 154 aa10.37□□□□□ -0.75
SSR4-202ENST00000370085 DNASE2O00115 360 aaPredicted RBP10.37□□□□□ -0.75
SSR4-202ENST00000370085 DFFBO76075 338 aa10.37□□□□□ -0.75
SSR4-202ENST00000370085 ORM2P19652 201 aa10.37□□□□□ -0.75
SSR4-202ENST00000370085 CAMLGP49069 296 aa10.37□□□□□ -0.75
SSR4-202ENST00000370085 CMC4P56277 68 aaPredicted RBP10.37□□□□□ -0.75
SSR4-202ENST00000370085 CD81P60033 236 aa10.37□□□□□ -0.75
SSR4-202ENST00000370085 VWC2Q2TAL6 325 aa10.37□□□□□ -0.75
SSR4-202ENST00000370085 ZNF414Q96IQ9 312 aa10.37□□□□□ -0.75
SSR4-202ENST00000370085 KCNIP2Q9NS61 270 aa10.37□□□□□ -0.75
SSR4-202ENST00000370085 IGHV3-66A0A0C4DH42 116 aa10.36□□□□□ -0.75
SSR4-202ENST00000370085 ZNF785A8K8V0 405 aa10.36□□□□□ -0.75
SSR4-202ENST00000370085 K7EIL1 84 aa10.36□□□□□ -0.75
SSR4-202ENST00000370085 AGPAT2O15120 278 aa10.36□□□□□ -0.75
SSR4-202ENST00000370085 HYPMO75409 117 aa10.36□□□□□ -0.75
SSR4-202ENST00000370085 LINC00869P0C866 280 aa10.36□□□□□ -0.75
SSR4-202ENST00000370085 LYL1P12980 280 aa10.36□□□□□ -0.75
SSR4-202ENST00000370085 NHLH2Q02577 135 aa10.36□□□□□ -0.75
SSR4-202ENST00000370085 C1orf194Q5T5A4 169 aa10.36□□□□□ -0.75
SSR4-202ENST00000370085 Q6ZRG5 221 aa10.36□□□□□ -0.75
SSR4-202ENST00000370085 ZNF709Q8N972 641 aa10.36□□□□□ -0.75
SSR4-202ENST00000370085 INO80EQ8NBZ0 244 aaPredicted RBP10.36□□□□□ -0.75
SSR4-202ENST00000370085 OR1B1Q8NGR6 318 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms