RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 DDB2Q92466 427 aa8.1□□□□□ -1.11
PRPF38B-203ENST00000370025 RALYQ9UKM9 306 aaKnown RBP8.1□□□□□ -1.11
PRPF38B-203ENST00000370025 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.1□□□□□ -1.115e-8■■■□□ 19.1
PRPF38B-203ENST00000370025 HIVEP3Q5T1R4 2406 aa8.1□□□□□ -1.11
PRPF38B-203ENST00000370025 FOXH1O75593 365 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 C1orf229Q6ZS94 237 aaPredicted RBP8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 OR2D3Q8NGH3 330 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 OR1N2Q8NGR9 330 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 RAB37Q96AX2 223 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 CHRDL1Q9BU40 450 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 YTHDF2Q9Y5A9 579 aaKnown RBP8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 ZZEF1O43149 2961 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 IGHV2-26A0A0B4J1V2 119 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 TAX1BP3O14907 124 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 NPY1RP25929 384 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 FOXA3P55318 350 aaPredicted RBP8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 EBLN2Q6P2I7 272 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 NEU4Q8WWR8 484 aaPredicted RBP8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 TIMD4Q96H15 378 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 OR9G9P0C7N8 305 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 RTL8BQ17RB0 113 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 ABHD12Q8N2K0 398 aa8.09□□□□□ -1.11
PRPF38B-203ENST00000370025 HSBP1L1C9JCN9 74 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 BMPR1BO00238 502 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 CRYBB3P26998 211 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 REG1BP48304 166 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 LGALS4P56470 323 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 TMEM155Q4W5P6 130 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 SPATA12Q7Z6I5 190 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 LHFPL4Q7Z7J7 247 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 OR4F17Q8NGA8 305 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 WFDC12Q8WWY7 111 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 RAB1CQ92928 201 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 ADGRG4Q8IZF6 3080 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 TRAV9-2A0A087WT02 112 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 IGHV3-21A0A0B4J1V1 117 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 OR10J4P0C629 311 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 USF1P22415 310 aaPredicted RBP8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 SLAQ13239 276 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 LINC00173Q6ZV60 143 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 OR10X1Q8NGY0 326 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 TMEM140Q9NV12 185 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 APCSP02743 223 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 RPL24P83731 157 aaKnown RBP8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 C11orf71Q6IPW1 123 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 TMEM14EPQ6UXP3 125 aa8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 MRPS16Q9Y3D3 137 aaKnown RBP8.08□□□□□ -1.12
PRPF38B-203ENST00000370025 PKD1L2Q7Z442 2459 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 GAGE10A6NGK3 116 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 OR4C46A6NHA9 309 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 CT45A6P0DMU7 189 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 CT45A5P0DMU8 189 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 CT45A7P0DMV0 189 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 GNG4P50150 75 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 SMAGPQ0VAQ4 97 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 CENPWQ5EE01 88 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 C8orf31Q8N9H6 132 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 OR8B3Q8NGG8 313 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 OR4P4Q8NGL7 312 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 OR52E5Q8NH55 327 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 GTSF1LQ9H1H1 148 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 C17orf112F2Z3M2 114 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 J3QR06 171 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 Q0VG73 95 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 ZNF833PQ6ZTB9 187 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 LINC00311Q8N616 119 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 AP1S3Q96PC3 154 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 KCNIP2Q9NS61 270 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 CDC42EP3Q9UKI2 254 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 HILPDAQ9Y5L2 63 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 CORTO00230 105 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 DLX6P56179 175 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 DTX2Q86UW9 622 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 TMEM116Q8NCL8 245 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 OR9G1Q8NH87 305 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 TMEM186Q96B77 213 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 ZNRD1Q9P1U0 126 aa8.07□□□□□ -1.12
PRPF38B-203ENST00000370025 A0A1W2PRD5 423 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 A0A1W2PRF3 423 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 A0A1W2PRM7 423 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 IGHV1-8P0DP01 117 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 CD1BP29016 333 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 MFAP2P55001 183 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 UBE2G1P62253 170 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 FOXE3Q13461 319 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 ZNF331Q9NQX6 463 aaPredicted RBP8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 FAM181BA6NEQ2 426 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 ENSAO43768 121 aaKnown RBP8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 MYOD1P15172 320 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 FAM71F2Q6NXP2 309 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 FAM168AQ92567 244 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 SMIM12Q96EX1 92 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 H3BTX0 84 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 ZNF138P52744 262 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 POU2AF1Q16633 256 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 TMEM136Q6ZRR5 245 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 OR1B1Q8NGR6 318 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 EAF1Q96JC9 268 aaPredicted RBP8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 LINC00479Q96M42 142 aa8.06□□□□□ -1.12
PRPF38B-203ENST00000370025 TPPP3Q9BW30 176 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms