RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 GINS3Q9BRX5 216 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 PBDC1Q9BVG4 233 aa10.56□□□□□ -0.72
TPM3-211ENST00000368531 DAZ1Q9NQZ3 744 aaKnown RBP10.56□□□□□ -0.72
TPM3-211ENST00000368531 IGHV3-66A0A0C4DH42 116 aa10.55□□□□□ -0.72
TPM3-211ENST00000368531 A8MWP6 167 aa10.55□□□□□ -0.72
TPM3-211ENST00000368531 G3V3Q6 166 aa10.55□□□□□ -0.72
TPM3-211ENST00000368531 FGF7P21781 194 aa10.55□□□□□ -0.72
TPM3-211ENST00000368531 AP2S1P53680 142 aaPredicted RBP10.55□□□□□ -0.72
TPM3-211ENST00000368531 ELLP55199 621 aaPredicted RBP10.55□□□□□ -0.72
TPM3-211ENST00000368531 LYZP61626 148 aa10.55□□□□□ -0.72
TPM3-211ENST00000368531 CYP2G1PQ6ZSU1 146 aa10.55□□□□□ -0.72
TPM3-211ENST00000368531 K7EMT4 169 aa10.54□□□□□ -0.72
TPM3-211ENST00000368531 AGPAT2O15120 278 aa10.54□□□□□ -0.72
TPM3-211ENST00000368531 ARPC5O15511 151 aa10.54□□□□□ -0.72
TPM3-211ENST00000368531 APOHP02749 345 aaPredicted RBP10.54□□□□□ -0.72
TPM3-211ENST00000368531 NPPCP23582 126 aa10.54□□□□□ -0.72
TPM3-211ENST00000368531 USF2Q15853 346 aaPredicted RBP10.54□□□□□ -0.72
TPM3-211ENST00000368531 VWC2Q2TAL6 325 aa10.54□□□□□ -0.72
TPM3-211ENST00000368531 SAMD5Q5TGI4 173 aa10.54□□□□□ -0.72
TPM3-211ENST00000368531 BTNL8Q6UX41 500 aa10.54□□□□□ -0.72
TPM3-211ENST00000368531 INO80EQ8NBZ0 244 aaPredicted RBP10.54□□□□□ -0.72
TPM3-211ENST00000368531 ST6GAL2Q96JF0 529 aa10.54□□□□□ -0.72
TPM3-211ENST00000368531 METTL26Q96S19 204 aa10.54□□□□□ -0.72
TPM3-211ENST00000368531 MGST2Q99735 147 aa10.54□□□□□ -0.72
TPM3-211ENST00000368531 GPR61Q9BZJ8 451 aa10.54□□□□□ -0.72
TPM3-211ENST00000368531 MRPL27Q9P0M9 148 aaKnown RBP10.54□□□□□ -0.72
TPM3-211ENST00000368531 WDR83OSQ9Y284 106 aa10.54□□□□□ -0.72
TPM3-211ENST00000368531 IGHV7-4-1A0A0J9YVY3 117 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 WI2-2373I1.2A0A1W2PRP0 233 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 INSL3P51460 131 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 RAB31Q13636 194 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 BPIFCQ8NFQ6 507 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 RNF125Q96EQ8 232 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 AQP10Q96PS8 301 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 ATP5SQ99766 215 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 WFDC1Q9HC57 220 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 DOK5Q9P104 306 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 MLXQ9UH92 298 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 SMPXQ9UHP9 88 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 TNFSF18Q9UNG2 199 aa10.53□□□□□ -0.72
TPM3-211ENST00000368531 LSM4Q9Y4Z0 139 aaKnown RBP10.53□□□□□ -0.72
TPM3-211ENST00000368531 LINC00869P0C866 280 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 C8orf88P0DMB2 117 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 ORM2P19652 201 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 CAMLGP49069 296 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 DEFB114Q30KQ6 69 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 CD300EQ496F6 205 aaPredicted RBP10.52□□□□□ -0.73
TPM3-211ENST00000368531 AKAP14Q86UN6 197 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 OR11H4Q8NGC9 324 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 OR1B1Q8NGR6 318 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 MARC2Q969Z3 335 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 PPP1R14BQ96C90 147 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 RHPN1-AS1Q9BWJ2 59 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 FBXL17Q9UF56 701 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 RABAC1Q9UI14 185 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 SLC45A2Q9UMX9 530 aa10.52□□□□□ -0.73
TPM3-211ENST00000368531 RNF222A6NCQ9 220 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 IZUMO1RA6ND01 250 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 CHEK1O14757 476 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 DFFBO76075 338 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 IFNA5P01569 189 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 IGLV1-51P01701 117 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 HNRNPCP07910 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
TPM3-211ENST00000368531 KRTAP10-11P60412 298 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 MIC13Q5XKP0 118 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 SCGB1C1Q8TD33 95 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 ST8SIA2Q92186 375 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 NARS2Q96I59 477 aaKnown RBP10.51□□□□□ -0.73
TPM3-211ENST00000368531 GGTLC1Q9BX51 225 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 MFFQ9GZY8 342 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 ARL6Q9H0F7 186 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 SIGLEC8Q9NYZ4 499 aa10.51□□□□□ -0.73
TPM3-211ENST00000368531 IGKV3-7A0A075B6H7 116 aa10.5□□□□□ -0.73
TPM3-211ENST00000368531 PRB2P02812 416 aaPredicted RBP10.5□□□□□ -0.73
TPM3-211ENST00000368531 OR5G3P0C626 314 aa10.5□□□□□ -0.73
TPM3-211ENST00000368531 CRYBB3P26998 211 aa10.5□□□□□ -0.73
TPM3-211ENST00000368531 SELENOTP62341 195 aa10.5□□□□□ -0.73
TPM3-211ENST00000368531 CD300CQ08708 224 aa10.5□□□□□ -0.73
TPM3-211ENST00000368531 GUCA2BQ16661 112 aa10.5□□□□□ -0.73
TPM3-211ENST00000368531 BEAN1Q3B7T3 259 aa10.5□□□□□ -0.73
TPM3-211ENST00000368531 RNF2Q99496 336 aa10.5□□□□□ -0.73
TPM3-211ENST00000368531 WDR61Q9GZS3 305 aaKnown RBP10.5□□□□□ -0.73
TPM3-211ENST00000368531 TECRQ9NZ01 308 aaKnown RBP10.5□□□□□ -0.73
TPM3-211ENST00000368531 A0A1W2PS18 150 aa10.49□□□□□ -0.73
TPM3-211ENST00000368531 CFDP00746 253 aaPredicted RBP10.49□□□□□ -0.73
TPM3-211ENST00000368531 BMI1P35226 326 aa10.49□□□□□ -0.73
TPM3-211ENST00000368531 EIF2B2P49770 351 aaKnown RBP10.49□□□□□ -0.73
TPM3-211ENST00000368531 RPL11P62913 178 aaKnown RBP10.49□□□□□ -0.73
TPM3-211ENST00000368531 OPCMLQ14982 345 aa10.49□□□□□ -0.73
TPM3-211ENST00000368531 RBPMS2Q6ZRY4 209 aaKnown RBP10.49□□□□□ -0.73
TPM3-211ENST00000368531 TCF24Q7RTU0 167 aa10.49□□□□□ -0.73
TPM3-211ENST00000368531 TCTE3Q8IZS6 198 aa10.49□□□□□ -0.73
TPM3-211ENST00000368531 TMEM61Q8N0U2 210 aa10.49□□□□□ -0.73
TPM3-211ENST00000368531 STPG3Q8N7X2 389 aa10.49□□□□□ -0.73
TPM3-211ENST00000368531 ZNF709Q8N972 641 aa10.49□□□□□ -0.73
TPM3-211ENST00000368531 RSG1Q9BU20 258 aa10.49□□□□□ -0.73
TPM3-211ENST00000368531 NPCDR1Q9BY65 106 aa10.49□□□□□ -0.73
TPM3-211ENST00000368531 RFNGQ9Y644 331 aa10.49□□□□□ -0.73
TPM3-211ENST00000368531 PXMP4Q9Y6I8 212 aa10.49□□□□□ -0.73
TPM3-211ENST00000368531 VWFP04275 2813 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms