RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 C5orf51A6NDU8 294 aa10.92□□□□□ -0.66
SF3B5-201ENST00000367569 PRSS46E5RG02 174 aa10.92□□□□□ -0.66
SF3B5-201ENST00000367569 RRAS2P62070 204 aaPredicted RBP10.92□□□□□ -0.66
SF3B5-201ENST00000367569 RPL11P62913 178 aaKnown RBP10.92□□□□□ -0.66
SF3B5-201ENST00000367569 ID3Q02535 119 aa10.92□□□□□ -0.66
SF3B5-201ENST00000367569 LAMTOR1Q6IAA8 161 aa10.92□□□□□ -0.66
SF3B5-201ENST00000367569 FAM24BQ8N5W8 94 aa10.92□□□□□ -0.66
SF3B5-201ENST00000367569 OR51G1Q8NGK1 321 aa10.92□□□□□ -0.66
SF3B5-201ENST00000367569 CIB3Q96Q77 187 aaPredicted RBP10.92□□□□□ -0.66
SF3B5-201ENST00000367569 METTL26Q96S19 204 aa10.92□□□□□ -0.66
SF3B5-201ENST00000367569 EDA2RQ9HAV5 297 aa10.92□□□□□ -0.66
SF3B5-201ENST00000367569 STRAPQ9Y3F4 350 aaKnown RBP10.92□□□□□ -0.66
SF3B5-201ENST00000367569 OR4C46A6NHA9 309 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 TOMM40O96008 361 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 MBPP02686 304 aaPredicted RBP10.91□□□□□ -0.66
SF3B5-201ENST00000367569 METTL15P1P0C7V9 234 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 PSG1P11464 419 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 NPPCP23582 126 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 P2RY1P47900 373 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 PAX9P55771 341 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 S100A10P60903 97 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 LYZP61626 148 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 AKR1C1Q04828 323 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 ZFAND6Q6FIF0 208 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 APRG1Q8IVJ8 170 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 STXBP6Q8NFX7 210 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 Q8WTZ3 238 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 VSIRQ9H7M9 311 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 RABAC1Q9UI14 185 aa10.91□□□□□ -0.66
SF3B5-201ENST00000367569 IGKV1OR2-108A0A075B7D4 117 aa10.9□□□□□ -0.66
SF3B5-201ENST00000367569 SIX6O95475 246 aa10.9□□□□□ -0.66
SF3B5-201ENST00000367569 RD3LP0DJH9 198 aa10.9□□□□□ -0.66
SF3B5-201ENST00000367569 YPEL3P61236 119 aaPredicted RBP10.9□□□□□ -0.66
SF3B5-201ENST00000367569 FAM90A2PQ658T7 463 aa10.9□□□□□ -0.66
SF3B5-201ENST00000367569 GOSR2O14653 212 aa10.89□□□□□ -0.67
SF3B5-201ENST00000367569 HNRNPCP07910 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
SF3B5-201ENST00000367569 RPL35AP18077 110 aaKnown RBP10.89□□□□□ -0.67
SF3B5-201ENST00000367569 GATA2P23769 480 aaPredicted RBP10.89□□□□□ -0.67
SF3B5-201ENST00000367569 CRYBB3P26998 211 aa10.89□□□□□ -0.67
SF3B5-201ENST00000367569 GPX4P36969 197 aaPredicted RBP10.89□□□□□ -0.67
SF3B5-201ENST00000367569 RNF125Q96EQ8 232 aa10.89□□□□□ -0.67
SF3B5-201ENST00000367569 MS4A6AQ9H2W1 248 aa10.89□□□□□ -0.67
SF3B5-201ENST00000367569 MAP6D1Q9H9H5 199 aa10.89□□□□□ -0.67
SF3B5-201ENST00000367569 HYDINQ4G0P3 5121 aa10.89□□□□□ -0.67
SF3B5-201ENST00000367569 LCE6AA0A183 80 aa10.88□□□□□ -0.67
SF3B5-201ENST00000367569 K7EPK0 472 aa10.88□□□□□ -0.67
SF3B5-201ENST00000367569 RPP30P78346 268 aaKnown RBP10.88□□□□□ -0.67
SF3B5-201ENST00000367569 LEMD1Q68G75 181 aa10.88□□□□□ -0.67
SF3B5-201ENST00000367569 SPATA25Q9BR10 227 aa10.88□□□□□ -0.67
SF3B5-201ENST00000367569 PLECQ15149 4684 aaKnown RBP10.88□□□□□ -0.67
SF3B5-201ENST00000367569 BIRC6Q9NR09 4857 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 C7orf66A4D0T2 115 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 PMS2P5A8MQ11 134 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 INMT-MINDY4F8WBC2 141 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 L7N2F9 121 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 DNASE2O00115 360 aaPredicted RBP10.87□□□□□ -0.67
SF3B5-201ENST00000367569 BMI1P35226 326 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 DEFA1P59665 94 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 DEFA3P59666 94 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 VAMP2P63027 116 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 ARL16Q0P5N6 197 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 LINC00322Q6ZN03 302 aaPredicted RBP10.87□□□□□ -0.67
SF3B5-201ENST00000367569 TMEM182Q6ZP80 229 aaPredicted RBP10.87□□□□□ -0.67
SF3B5-201ENST00000367569 THAP8Q8NA92 274 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 NARS2Q96I59 477 aaKnown RBP10.87□□□□□ -0.67
SF3B5-201ENST00000367569 SMIM8Q96KF7 97 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 TMEM231Q9H6L2 316 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 DOK5Q9P104 306 aa10.87□□□□□ -0.67
SF3B5-201ENST00000367569 IL5P05113 134 aa10.86□□□□□ -0.67
SF3B5-201ENST00000367569 ZNF688P0C7X2 276 aa10.86□□□□□ -0.67
SF3B5-201ENST00000367569 BCAP31P51572 246 aa10.86□□□□□ -0.67
SF3B5-201ENST00000367569 CAV2P51636 162 aa10.86□□□□□ -0.67
SF3B5-201ENST00000367569 ATP5IP56385 69 aaPredicted RBP10.86□□□□□ -0.67
SF3B5-201ENST00000367569 RAB32Q13637 225 aa10.86□□□□□ -0.67
SF3B5-201ENST00000367569 TMEM14EPQ6UXP3 125 aa10.86□□□□□ -0.67
SF3B5-201ENST00000367569 STPG3Q8N7X2 389 aa10.86□□□□□ -0.67
SF3B5-201ENST00000367569 GLMPQ8WWB7 406 aa10.86□□□□□ -0.67
SF3B5-201ENST00000367569 GRAMD2BQ96HH9 432 aa10.86□□□□□ -0.67
SF3B5-201ENST00000367569 C2orf50Q96LR7 162 aa10.86□□□□□ -0.67
SF3B5-201ENST00000367569 GGTLC1Q9BX51 225 aa10.86□□□□□ -0.67
SF3B5-201ENST00000367569 GPN1Q9HCN4 374 aaPredicted RBP10.86□□□□□ -0.67
SF3B5-201ENST00000367569 LOC102724200A0A096LPH7 203 aaPredicted RBP10.85□□□□□ -0.67
SF3B5-201ENST00000367569 A0A1W2PS18 150 aa10.85□□□□□ -0.67
SF3B5-201ENST00000367569 FAM24AA6NFZ4 105 aa10.85□□□□□ -0.67
SF3B5-201ENST00000367569 DEFB131AP59861 70 aa10.85□□□□□ -0.67
SF3B5-201ENST00000367569 SLC38A11Q08AI6 406 aa10.85□□□□□ -0.67
SF3B5-201ENST00000367569 LRRC37A5PQ49AS3 106 aa10.85□□□□□ -0.67
SF3B5-201ENST00000367569 C16orf54Q6UWD8 224 aa10.85□□□□□ -0.67
SF3B5-201ENST00000367569 PPP1R14BQ96C90 147 aa10.85□□□□□ -0.67
SF3B5-201ENST00000367569 RAB40CQ96S21 281 aa10.85□□□□□ -0.67
SF3B5-201ENST00000367569 TRGV9Q99603 122 aa10.85□□□□□ -0.67
SF3B5-201ENST00000367569 U3KQE9 123 aa10.85□□□□□ -0.67
SF3B5-201ENST00000367569 AGRNO00468 2067 aa10.85□□□□□ -0.67
SF3B5-201ENST00000367569 TSC22D2O75157 780 aa10.84□□□□□ -0.67
SF3B5-201ENST00000367569 CST7O76096 145 aa10.84□□□□□ -0.67
SF3B5-201ENST00000367569 EIF2B2P49770 351 aaKnown RBP10.84□□□□□ -0.67
SF3B5-201ENST00000367569 PAFAH1B2P68402 229 aa10.84□□□□□ -0.67
SF3B5-201ENST00000367569 C11orf1Q9H5F2 150 aa10.84□□□□□ -0.67
SF3B5-201ENST00000367569 IGSF23A1L1A6 192 aa10.83□□□□□ -0.68
SF3B5-201ENST00000367569 K7EQG2 157 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms