RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 KLK9Q2XQG4 91 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 ASPHD1Q5U4P2 390 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 MIC13Q5XKP0 118 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 C16orf82Q7Z2V1 217 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 C5orf56Q8N8D9 126 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 TMEM116Q8NCL8 245 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 WFDC9Q8NEX5 89 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 BPIFCQ8NFQ6 507 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 MISP3Q96FF7 219 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 TMEM68Q96MH6 324 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 SLC25A33Q9BSK2 321 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 SLC39A9Q9NUM3 307 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 KLK9Q9UKQ9 250 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 DMRT1Q9Y5R6 373 aa8.76□□□□□ -1.01
CSNK1E-202ENST00000366216 TMEM218A2RU14 115 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 MAP1LC3B2A6NCE7 125 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 A6NDX4 124 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 I3L2K1 104 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 LINC00869P0C866 280 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 NHLRC4P0CG21 123 aaPredicted RBP8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 APELAP0DMC3 54 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 DEFA4P12838 97 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 OR10J1P30954 320 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 CCL20P78556 96 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 CASC10Q5T4H9 136 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 CYP2G1PQ6ZSU1 146 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 STPG3Q8N7X2 389 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 NPIPB3Q92617 1050 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 LINC00052Q96N35 136 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 MAP1LC3BQ9GZQ8 125 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 TREM1Q9NP99 234 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 GAR1Q9NY12 217 aaKnown RBP8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 PITPNC1Q9UKF7 332 aa8.75□□□□□ -1.01
CSNK1E-202ENST00000366216 IGKV1D-37A0A075B6S9 117 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 TCRBV4S1A1TA0A5B7 111 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 M0QZK8 103 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 MT-CO2P00403 227 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 CDC34P49427 236 aaPredicted RBP8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 RND2P52198 227 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 SELENOTP62341 195 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 SRSF3P84103 164 aaKnown RBP8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 FAM122CQ6P4D5 195 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 LCN15Q6UWW0 184 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 SSX7Q7RTT5 188 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 RAB24Q969Q5 203 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 ACY3Q96HD9 319 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 TRGV9Q99603 122 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 CITED2Q99967 270 aaPredicted RBP8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 HSPB9Q9BQS6 159 aa8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 FAM103A1Q9BTL3 118 aaKnown RBP8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 MRPL36Q9P0J6 103 aaKnown RBP8.74□□□□□ -1.01
CSNK1E-202ENST00000366216 IGLV11-55A0A075B6I3 123 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 LCE6AA0A183 80 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 A0A1B0GV50 99 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 A0A1W2PPV4 95 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 RBFOX3A6NFN3 312 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 H3BUX3 64 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 K7EIM0 57 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 HIST1H1BP16401 226 aaKnown RBP8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 TAGLN2P37802 199 aaKnown RBP8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 CRIP2P52943 208 aaPredicted RBP8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 RHOBP62745 196 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 EGFEM1PQ0D2K5 195 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 ZNF506Q5JVG8 444 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 C10orf91Q5T1B1 145 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 C19orf35Q6ZS72 473 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 OR4X1Q8NH49 305 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 WIPF2Q8TF74 440 aaPredicted RBP8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 NARS2Q96I59 477 aaKnown RBP8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 FANCD2OSQ96PS1 177 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 EIF5A2Q9GZV4 153 aaKnown RBP8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 SLC25A22Q9H936 323 aa8.73□□□□□ -1.01
CSNK1E-202ENST00000366216 ZFP92A6NM28 416 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 ATP6V0E1O15342 81 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 NDUFS6O75380 124 aaKnown RBP8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 IFNA1P01562 189 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 AMY1AP04745 511 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 PPT1P50897 306 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 FGF8P55075 233 aaPredicted RBP8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 AKIRIN2Q53H80 203 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 KHDC3LQ587J8 217 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 GCSAMLQ5JQS6 135 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 TMEM219Q86XT9 240 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 MUC7Q8TAX7 377 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 RNF2Q99496 336 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 SEC11CQ9BY50 192 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 NPFFR1Q9GZQ6 430 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 TMEM231Q9H6L2 316 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 THYN1Q9P016 225 aa8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 CARHSP1Q9Y2V2 147 aaKnown RBP8.72□□□□□ -1.01
CSNK1E-202ENST00000366216 LOC102723971A0A1B0GUV8 181 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 PSMB11A5LHX3 300 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 C9JQL5 133 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 CLN5O75503 358 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 IGHV3-48P01763 117 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 HSPB1P04792 205 aaKnown RBP8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 OR5G3P0C626 314 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 STAG3L2P0CL84 134 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 STAG3L3P0CL85 134 aa8.71□□□□□ -1.02
CSNK1E-202ENST00000366216 BCL2P10415 239 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms