RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 TECRQ9NZ01 308 aaKnown RBP5.84□□□□□ -1.47
CLCN3-202ENST00000360642 IL36BQ9NZH7 164 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 KAAG1Q9UBP8 84 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 CTSZQ9UBR2 303 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 DCHS2Q6V1P9 2916 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 ASH1LQ9NR48 2969 aaKnown RBP5.84□□□□□ -1.47
CLCN3-202ENST00000360642 TNCP24821 2201 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 SHISA9B4DS77 424 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 GATCO43716 136 aaKnown RBP5.84□□□□□ -1.47
CLCN3-202ENST00000360642 VPREB1P12018 145 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 PKIAP61925 76 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 PRB3Q04118 309 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-202ENST00000360642 GFRALQ6UXV0 394 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 ASCL5Q7RTU5 278 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 CCL17Q92583 94 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 RNASE6Q93091 150 aaKnown RBP5.84□□□□□ -1.47
CLCN3-202ENST00000360642 WFIKKN1Q96NZ8 548 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 SLC25A33Q9BSK2 321 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 COMMD5Q9GZQ3 224 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 RNF114Q9Y508 228 aa5.84□□□□□ -1.47
CLCN3-202ENST00000360642 NDUFB3O43676 98 aa5.84□□□□□ -1.48
CLCN3-202ENST00000360642 GCGP01275 180 aa5.84□□□□□ -1.48
CLCN3-202ENST00000360642 HNF1AP20823 631 aa5.84□□□□□ -1.48
CLCN3-202ENST00000360642 LOXP28300 417 aaPredicted RBP5.84□□□□□ -1.48
CLCN3-202ENST00000360642 REG1BP48304 166 aa5.84□□□□□ -1.48
CLCN3-202ENST00000360642 ERHP84090 104 aaKnown RBP5.84□□□□□ -1.48
CLCN3-202ENST00000360642 WT1-ASQ06250 92 aa5.84□□□□□ -1.48
CLCN3-202ENST00000360642 MRGPRG-AS1Q2M3A8 158 aa5.84□□□□□ -1.48
CLCN3-202ENST00000360642 LRRC10Q5BKY1 277 aa5.84□□□□□ -1.48
CLCN3-202ENST00000360642 GBGT1Q8N5D6 347 aa5.84□□□□□ -1.48
CLCN3-202ENST00000360642 C11orf42Q8N5U0 333 aa5.84□□□□□ -1.48
CLCN3-202ENST00000360642 FAM167A-AS1Q96KT0 104 aa5.84□□□□□ -1.48
CLCN3-202ENST00000360642 TPRP12270 2363 aaKnown RBP5.83□□□□□ -1.48
CLCN3-202ENST00000360642 A0A1W2PN81 502 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 HELTA6NFD8 242 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 E7EQL1 145 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 CCL24O00175 119 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 OR10J4P0C629 311 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 OR10X1Q8NGY0 326 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 OR2T6Q8NHC8 308 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 VSTM2AQ8TAG5 236 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 MSRB1Q9NZV6 116 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 V9GYV3 84 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 ZGRF1Q86YA3 2104 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 COL12A1Q99715 3063 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 A0A1W2PRE2 83 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 GGTLC3B5MD39 225 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 SLC17A3O00476 420 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 C8orf88P0DMB2 117 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 CRYBB3P26998 211 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 TAS2R45P59539 299 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 SELENOTP62341 195 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 SSX2Q16385 188 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 TMEM155Q4W5P6 130 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 H1FXQ92522 213 aaKnown RBP5.83□□□□□ -1.48
CLCN3-202ENST00000360642 SLC25A2Q9BXI2 301 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 MRPL32Q9BYC8 188 aaKnown RBP5.83□□□□□ -1.48
CLCN3-202ENST00000360642 FNDC4Q9H6D8 234 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-202ENST00000360642 WASHC3Q9Y3C0 194 aa5.83□□□□□ -1.48
CLCN3-202ENST00000360642 SSBP2P81877 361 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-202ENST00000360642 CENPWQ5EE01 88 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 MORN5Q5VZ52 161 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 PVRIGQ6DKI7 326 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 ZNF430Q9H8G1 570 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-202ENST00000360642 RALYQ9UKM9 306 aaKnown RBP5.82□□□□□ -1.48
CLCN3-202ENST00000360642 IGKV1D-37A0A075B6S9 117 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 OR7C2O60412 319 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 FSTL3O95633 263 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 IGLV2-8P01709 118 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 IGHV1-8P0DP01 117 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 GNG4P50150 75 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 DLX1P56177 255 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 ZNF90Q03938 601 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 OR5I1Q13606 314 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 ZNF843Q8N446 348 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 THAP8Q8NA92 274 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 C14orf144Q96I85 54 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 IGF2BP2-AS1Q96M15 143 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 RNF2Q99496 336 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 DNAJC4Q9NNZ3 241 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 NUPR1O60356 82 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 DDTP30046 118 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 TMEM256Q8N2U0 113 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 TP53TG3Q9ULZ0 132 aa5.82□□□□□ -1.48
CLCN3-202ENST00000360642 SPTA1P02549 2419 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 TRAV5A0A0B4J249 113 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 hDV102S1A0JD36 115 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 TMEM8BA6NDV4 472 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 TSTD3H0UI37 97 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 SNRPCP09234 159 aaKnown RBP5.81□□□□□ -1.48
CLCN3-202ENST00000360642 PPOXP50336 477 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 ERVFC1-1P60608 527 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 DEFA6Q01524 100 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 ZNF415Q09FC8 603 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 RPEL1Q2QD12 228 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 PRR30Q53SZ7 412 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-202ENST00000360642 C10orf55Q5SWW7 151 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 PATE2Q6UY27 113 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 MMD2Q8IY49 270 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 ZNF664Q8N3J9 261 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms