RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SLC25A15Q9Y619 301 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 KIAA1549LQ6ZVL6 1849 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 IGHV1OR15-9A0A0B4J2B8 117 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 PAX2Q02962 417 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 TMEM141Q96I45 108 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 SSBP3Q9BWW4 388 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-202ENST00000357162 PSMB11A5LHX3 300 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 MLNRO43193 412 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 WNT5AP41221 380 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 KLRB1Q12918 225 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 TPTE2P1Q5T6R2 138 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 KLF14Q8TD94 323 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-202ENST00000357162 SAA2-SAA4A0A096LPE2 208 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 C22orf46C9J442 243 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 ETV2O00321 342 aaPredicted RBP5.5□□□□□ -1.53
VPS13B-202ENST00000357162 RFLNBQ8N5W9 214 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 CT55Q8WUE5 264 aa5.5□□□□□ -1.53
VPS13B-202ENST00000357162 ZNF385AQ96PM9 386 aaKnown RBP5.5□□□□□ -1.53
VPS13B-202ENST00000357162 TRAV2A0A0B4J234 112 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 RNF224P0DH78 156 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 GLMPQ8WWB7 406 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 MGPP08493 103 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 PEBP1P30086 187 aaKnown RBP5.49□□□□□ -1.53
VPS13B-202ENST00000357162 TMEM74BQ9NUR3 256 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 NHP2Q9NX24 153 aaKnown RBP5.49□□□□□ -1.53
VPS13B-202ENST00000357162 SEMA5BQ9P283 1151 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 ECSCRQ19T08 205 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 TTTY12Q9BZ98 90 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 IGHV3-43A0A0B4J1X8 118 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 IGHV5-10-1A0A0J9YXX1 117 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 TOMM40O96008 361 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 IGHV3-43DP0DP04 118 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 ZNF664Q8N3J9 261 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 SEPSECSQ9HD40 501 aaKnown RBP5.49□□□□□ -1.53
VPS13B-202ENST00000357162 TNFRSF18Q9Y5U5 241 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 SUPT4H1P63272 117 aaKnown RBP5.49□□□□□ -1.53
VPS13B-202ENST00000357162 ZIC4Q8N9L1 334 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 SCO2A0A1W2PP80 73 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 FAM157AC9JC47 383 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 WDR82Q6UXN9 313 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 GGTLC1Q9BX51 225 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 MEIG1Q5JSS6 88 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 RNF125Q96EQ8 232 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 TMEM126AQ9H061 195 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 PRR13Q9NZ81 148 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 KIR3DS1Q14943 382 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 SMRP1Q8NCR6 262 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 HCSTQ9UBK5 93 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 PLAUP00749 431 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 KLHDC3Q9BQ90 382 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 HLA-DMBP28068 263 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 DUTP33316 252 aaKnown RBP5.49□□□□□ -1.53
VPS13B-202ENST00000357162 VEGFBP49765 207 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 FXYD3Q14802 87 aa5.49□□□□□ -1.53
VPS13B-202ENST00000357162 RPP25LQ8N5L8 163 aaKnown RBP5.49□□□□□ -1.53
VPS13B-202ENST00000357162 ZNF501Q96CX3 271 aaPredicted RBP5.49□□□□□ -1.53
VPS13B-202ENST00000357162 CHCHD2Q9Y6H1 151 aaPredicted RBP5.49□□□□□ -1.53
VPS13B-202ENST00000357162 GAGE12JA6NER3 117 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 FOXH1O75593 365 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 GAGE7O76087 117 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 SPINK8P0C7L1 97 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 GAGE12FP0CL80 117 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 GAGE12GP0CL81 117 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 GAGE12IP0CL82 117 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 GAGE4Q13068 117 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 GUSBP1Q15486 140 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 MORN2Q502X0 79 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 LHFPL4Q7Z7J7 247 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 TRAV21A0A0B4J279 112 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 CENPVL1A0A0U1RR11 272 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 OVOL1O14753 267 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 CLEC2AQ6UVW9 174 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 ZNF418Q8TF45 676 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-202ENST00000357162 LAMTOR3Q9UHA4 124 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 DUSP14O95147 198 aaKnown RBP5.48□□□□□ -1.53
VPS13B-202ENST00000357162 PIMREGQ9BSJ6 248 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 NPIPB3Q92617 1050 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 ZNF815PA8K554 130 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 HRKO00198 91 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 SSTR5P35346 364 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 CGAP01215 116 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 C3orf36Q3SXR2 165 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 TREML4Q6UXN2 200 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 TIAF1O95411 115 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 NEUROG3Q9Y4Z2 214 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 LOC102724200A0A096LPH7 203 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-202ENST00000357162 IGHV2-70DA0A0C4DH43 119 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 K7EP13 123 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 VCYO14598 125 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 SPINT1O43278 529 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 OCC1Q8TAD7 63 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 TMEM14CQ9P0S9 112 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 SPINK9Q5DT21 86 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 COX8AP10176 69 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 DTX2Q86UW9 622 aa5.48□□□□□ -1.53
VPS13B-202ENST00000357162 DTX4Q9Y2E6 619 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 RTP5Q14D33 572 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 RFNGQ9Y644 331 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 SMIM27A0A1W2PRY6 76 aa5.47□□□□□ -1.53
VPS13B-202ENST00000357162 RHODO00212 210 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms