RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 C20orf24Q9BUV8 137 aa12.18□□□□□ -0.46
FDPS-201ENST00000356657 hCG_2014768A0A024R1R8 64 aa12.17□□□□□ -0.46
FDPS-201ENST00000356657 CSN3P07498 182 aa12.17□□□□□ -0.46
FDPS-201ENST00000356657 IGLL1P15814 213 aa12.17□□□□□ -0.46
FDPS-201ENST00000356657 SAMD5Q5TGI4 173 aa12.17□□□□□ -0.46
FDPS-201ENST00000356657 IL34Q6ZMJ4 242 aa12.17□□□□□ -0.46
FDPS-201ENST00000356657 S100A7AQ86SG5 101 aa12.17□□□□□ -0.46
FDPS-201ENST00000356657 BPIFCQ8NFQ6 507 aa12.17□□□□□ -0.46
FDPS-201ENST00000356657 METTL26Q96S19 204 aa12.17□□□□□ -0.46
FDPS-201ENST00000356657 TMEM231Q9H6L2 316 aa12.17□□□□□ -0.46
FDPS-201ENST00000356657 SLC45A2Q9UMX9 530 aa12.17□□□□□ -0.46
FDPS-201ENST00000356657 WDR83OSQ9Y284 106 aa12.17□□□□□ -0.46
FDPS-201ENST00000356657 SORL1Q92673 2214 aa12.17□□□□□ -0.46
FDPS-201ENST00000356657 CMYA5Q8N3K9 4069 aa12.16□□□□□ -0.46
FDPS-201ENST00000356657 A0A1W2PS18 150 aa12.16□□□□□ -0.46
FDPS-201ENST00000356657 PSG1P11464 419 aa12.16□□□□□ -0.46
FDPS-201ENST00000356657 FOLR2P14207 255 aa12.16□□□□□ -0.46
FDPS-201ENST00000356657 CBLN1P23435 193 aa12.16□□□□□ -0.46
FDPS-201ENST00000356657 NHLH2Q02577 135 aa12.16□□□□□ -0.46
FDPS-201ENST00000356657 PXDC1Q5TGL8 231 aa12.16□□□□□ -0.46
FDPS-201ENST00000356657 RNF125Q96EQ8 232 aa12.16□□□□□ -0.46
FDPS-201ENST00000356657 ZNF414Q96IQ9 312 aa12.16□□□□□ -0.46
FDPS-201ENST00000356657 KCNIP2Q9NS61 270 aa12.16□□□□□ -0.46
FDPS-201ENST00000356657 IGLV1-51P01701 117 aa12.15□□□□□ -0.46
FDPS-201ENST00000356657 IL4P05112 153 aa12.15□□□□□ -0.46
FDPS-201ENST00000356657 NPPCP23582 126 aa12.15□□□□□ -0.46
FDPS-201ENST00000356657 CYP2G1PQ6ZSU1 146 aa12.15□□□□□ -0.46
FDPS-201ENST00000356657 DYNLRB2Q8TF09 96 aa12.15□□□□□ -0.46
FDPS-201ENST00000356657 ATP5SQ99766 215 aa12.15□□□□□ -0.46
FDPS-201ENST00000356657 TNFSF18Q9UNG2 199 aa12.15□□□□□ -0.46
FDPS-201ENST00000356657 RNF24Q9Y225 148 aa12.15□□□□□ -0.46
FDPS-201ENST00000356657 FXYD6-FXYD2A0A087WZ82 144 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 IGHV7-4-1A0A0J9YVY3 117 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 WI2-2373I1.2A0A1W2PRP0 233 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 CRYBB3P26998 211 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 ZNF90Q03938 601 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 EGFEM1PQ0D2K5 195 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 TM4SF20Q53R12 229 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 KPRPQ5T749 579 aaPredicted RBP12.14□□□□□ -0.47
FDPS-201ENST00000356657 TCTE3Q8IZS6 198 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 PARD6GQ9BYG4 376 aaPredicted RBP12.14□□□□□ -0.47
FDPS-201ENST00000356657 TRAV25A0A0B4J276 109 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 UBE2L5PA0A1B0GUS4 154 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 HMSDA8MTL9 139 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 G3V3Q6 166 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 AGPAT2O15120 278 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 HNRNPCP07910 306 aaKnown RBP eCLIP12.14□□□□□ -0.472e-9■■■□□ 16.1
FDPS-201ENST00000356657 CAMLGP49069 296 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 ZNF266Q14584 549 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 Q5BKY6 102 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 LCN12Q6JVE5 192 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 BTNL8Q6UX41 500 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 AKAP14Q86UN6 197 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 GRAMD2BQ96HH9 432 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 SMPXQ9UHP9 88 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 RABAC1Q9UI14 185 aa12.14□□□□□ -0.47
FDPS-201ENST00000356657 IFNA5P01569 189 aa12.13□□□□□ -0.47
FDPS-201ENST00000356657 EIF2B2P49770 351 aaKnown RBP12.13□□□□□ -0.47
FDPS-201ENST00000356657 AP2S1P53680 142 aaPredicted RBP12.13□□□□□ -0.47
FDPS-201ENST00000356657 PLP1P60201 277 aa12.13□□□□□ -0.47
FDPS-201ENST00000356657 ZNF345Q14585 488 aa12.13□□□□□ -0.47
FDPS-201ENST00000356657 CLINT1Q14677 625 aa12.13□□□□□ -0.47
FDPS-201ENST00000356657 OXLD1Q5BKU9 147 aa12.13□□□□□ -0.47
FDPS-201ENST00000356657 RPL29P47914 159 aaKnown RBP12.12□□□□□ -0.47
FDPS-201ENST00000356657 LAMTOR1Q6IAA8 161 aa12.12□□□□□ -0.47
FDPS-201ENST00000356657 ST6GAL2Q96JF0 529 aa12.12□□□□□ -0.47
FDPS-201ENST00000356657 MGST2Q99735 147 aa12.12□□□□□ -0.47
FDPS-201ENST00000356657 VSIRQ9H7M9 311 aa12.12□□□□□ -0.47
FDPS-201ENST00000356657 C17orf112F2Z3M2 114 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 TAAR5O14804 337 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 LINC00869P0C866 280 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 FGF7P21781 194 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 LYZP61626 148 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 OR2F1Q13607 317 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 USF2Q15853 346 aaPredicted RBP12.11□□□□□ -0.47
FDPS-201ENST00000356657 DEFB114Q30KQ6 69 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 C1orf194Q5T5A4 169 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 ADAMTSL5Q6ZMM2 481 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 Q6ZRG5 221 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 ZNF709Q8N972 641 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 RHPN1-AS1Q9BWJ2 59 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 GGTLC1Q9BX51 225 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 NPCDR1Q9BY65 106 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 WDR61Q9GZS3 305 aaKnown RBP12.11□□□□□ -0.47
FDPS-201ENST00000356657 U3KQE9 123 aa12.11□□□□□ -0.47
FDPS-201ENST00000356657 IGHV3OR16-8A0A075B7F1 116 aa12.1□□□□□ -0.47
FDPS-201ENST00000356657 ELOA3CA0A087WX78 387 aaPredicted RBP12.1□□□□□ -0.47
FDPS-201ENST00000356657 RNF222A6NCQ9 220 aa12.1□□□□□ -0.47
FDPS-201ENST00000356657 G3V4G9 280 aa12.1□□□□□ -0.47
FDPS-201ENST00000356657 CHEK1O14757 476 aa12.1□□□□□ -0.47
FDPS-201ENST00000356657 DEFA6Q01524 100 aa12.1□□□□□ -0.47
FDPS-201ENST00000356657 OPCMLQ14982 345 aa12.1□□□□□ -0.47
FDPS-201ENST00000356657 BEAN1Q3B7T3 259 aa12.1□□□□□ -0.47
FDPS-201ENST00000356657 SCGB1C1Q8TD33 95 aa12.1□□□□□ -0.47
FDPS-201ENST00000356657 PBDC1Q9BVG4 233 aa12.1□□□□□ -0.47
FDPS-201ENST00000356657 FBXL17Q9UF56 701 aa12.1□□□□□ -0.47
FDPS-201ENST00000356657 HELTA6NFD8 242 aa12.09□□□□□ -0.47
FDPS-201ENST00000356657 ARPC5O15511 151 aa12.09□□□□□ -0.47
FDPS-201ENST00000356657 PRR20EP86478 221 aa12.09□□□□□ -0.47
FDPS-201ENST00000356657 PRR20CP86479 221 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms