RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CIARTQ8N365 385 aaPredicted RBP8.17□□□□□ -1.1
PTPRA-203ENST00000356147 PNKDQ8N490 385 aa8.17□□□□□ -1.1
PTPRA-203ENST00000356147 TEX45Q8NA69 505 aa8.17□□□□□ -1.1
PTPRA-203ENST00000356147 ZNF71Q9NQZ8 489 aaPredicted RBP8.17□□□□□ -1.1
PTPRA-203ENST00000356147 RAI1Q7Z5J4 1906 aaPredicted RBP8.17□□□□□ -1.1
PTPRA-203ENST00000356147 IGKV1D-37A0A075B6S9 117 aa8.17□□□□□ -1.1
PTPRA-203ENST00000356147 TAX1BP3O14907 124 aa8.17□□□□□ -1.1
PTPRA-203ENST00000356147 FXYD7P58549 80 aa8.17□□□□□ -1.1
PTPRA-203ENST00000356147 PDPNQ86YL7 162 aa8.17□□□□□ -1.1
PTPRA-203ENST00000356147 COL27A1Q8IZC6 1860 aaPredicted RBP8.17□□□□□ -1.1
PTPRA-203ENST00000356147 CACNA1HO95180 2353 aa8.17□□□□□ -1.1
PTPRA-203ENST00000356147 CGB1A6NKQ9 187 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 DLL1O00548 723 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 SLC25A17O43808 307 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 IGLV1-44P01699 117 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 HBBP68871 147 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 GAFA1Q96PS6 74 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 EPDR1Q9UM22 224 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 A0A1W2PRD5 423 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 A0A1W2PRF3 423 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 A0A1W2PRM7 423 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 ENSAO43768 121 aaKnown RBP8.16□□□□□ -1.1
PTPRA-203ENST00000356147 UQCRFS1P47985 274 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 TNFAIP6P98066 277 aaPredicted RBP8.16□□□□□ -1.1
PTPRA-203ENST00000356147 TMEM116Q8NCL8 245 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 H1FXQ92522 213 aaKnown RBP8.16□□□□□ -1.1
PTPRA-203ENST00000356147 GAL3ST2Q9H3Q3 398 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 C7orf69Q9H7B7 122 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 NDUFA4L2Q9NRX3 87 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 PROCRQ9UNN8 238 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 C22orf46C9J442 243 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 LHBP01229 141 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 P01737 135 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 KLF5Q13887 457 aaPredicted RBP8.16□□□□□ -1.1
PTPRA-203ENST00000356147 BVES-AS1Q5T3Y7 98 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 SLC25A48Q6ZT89 311 aaKnown RBP8.16□□□□□ -1.1
PTPRA-203ENST00000356147 OR1L8Q8NGR8 309 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 WIPF2Q8TF74 440 aaPredicted RBP8.16□□□□□ -1.1
PTPRA-203ENST00000356147 ADTRPQ96IZ2 230 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 ZNF430Q9H8G1 570 aaPredicted RBP8.16□□□□□ -1.1
PTPRA-203ENST00000356147 RNF7Q9UBF6 113 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 RPUSD1Q9UJJ7 312 aaKnown RBP8.16□□□□□ -1.1
PTPRA-203ENST00000356147 SLC25A15Q9Y619 301 aa8.16□□□□□ -1.1
PTPRA-203ENST00000356147 A0A1B0GXF2 115 aa8.15□□□□□ -1.1
PTPRA-203ENST00000356147 hADV38S2A0JD32 116 aa8.15□□□□□ -1.1
PTPRA-203ENST00000356147 COTL1Q14019 142 aa8.15□□□□□ -1.1
PTPRA-203ENST00000356147 EXOC3-AS1Q8N2X6 119 aa8.15□□□□□ -1.1
PTPRA-203ENST00000356147 TMUB1Q9BVT8 246 aa8.15□□□□□ -1.1
PTPRA-203ENST00000356147 MRPL32Q9BYC8 188 aaKnown RBP8.15□□□□□ -1.1
PTPRA-203ENST00000356147 CHEK1O14757 476 aa8.15□□□□□ -1.11
PTPRA-203ENST00000356147 NBEAP1P0C6P0 100 aa8.15□□□□□ -1.11
PTPRA-203ENST00000356147 GUSBP1Q15486 140 aa8.15□□□□□ -1.11
PTPRA-203ENST00000356147 POU2AF1Q16633 256 aa8.15□□□□□ -1.11
PTPRA-203ENST00000356147 SLC25A34Q6PIV7 304 aa8.15□□□□□ -1.11
PTPRA-203ENST00000356147 RPP21Q9H633 154 aaKnown RBP8.15□□□□□ -1.11
PTPRA-203ENST00000356147 DKK4Q9UBT3 224 aa8.15□□□□□ -1.11
PTPRA-203ENST00000356147 TCRBV4S1A1TA0A5B7 111 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 OR2J3O76001 311 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 CDKN1BP46527 198 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 FAM231DQ6ZW35 169 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 PRNTQ86SH4 94 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 DAZAP1Q96EP5 407 aaKnown RBP8.14□□□□□ -1.11
PTPRA-203ENST00000356147 SSUH2Q9Y2M2 353 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 CACNA1BQ00975 2339 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 TRAV8-6A0A0B4J262 113 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 A0A1W2PPI3 338 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 FNDC10F2Z333 226 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 FSTL3O95633 263 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 NCR2O95944 276 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 IGHV1-46P01743 117 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 APOA2P02652 100 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 BPIFB3P59826 476 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 ANKRD39Q53RE8 183 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 SAPCD1Q5SSQ6 148 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 SEM1Q6ZVN7 128 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.14□□□□□ -1.11
PTPRA-203ENST00000356147 OR10X1Q8NGY0 326 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 GPR82Q96P67 336 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 C19orf24Q9BVV8 132 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 CST9LQ9H4G1 147 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 LRBAP50851 2863 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 LOC389332A0A1B0GUA5 103 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 PRR33A8MZF0 331 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 PPIAL4DF5H284 164 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 K7EP13 123 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 FAM106CPP0CH98 169 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 CD59P13987 128 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 PSG9Q00887 426 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 MZT1Q08AG7 82 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 FAM106AQ4KMX7 169 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 ZNF474Q6S9Z5 364 aaPredicted RBP8.14□□□□□ -1.11
PTPRA-203ENST00000356147 UBALD2Q8IYN6 164 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 ZNF714Q96N38 554 aa8.14□□□□□ -1.11
PTPRA-203ENST00000356147 RELNP78509 3460 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 HSBP1L1C9JCN9 74 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 CNTFRP26992 372 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 COL8A1P27658 744 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 LRRC10Q5BKY1 277 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 OR1L4Q8NGR5 311 aa8.13□□□□□ -1.11
PTPRA-203ENST00000356147 Q9H3A6 140 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms