RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 Q6ZRG5 221 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 TMEM144Q7Z5S9 345 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 C11orf44Q8N8P7 122 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 TMEM170AQ8WVE7 144 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 MARC2Q969Z3 335 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 BSCL2Q96G97 398 aaPredicted RBP5.44□□□□□ -1.54
VPS13A-201ENST00000355766 SLC35E1Q96K37 410 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 ATP6V0BQ99437 205 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 B9D2Q9BPU9 175 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 PBDC1Q9BVG4 233 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 KLK15Q9H2R5 256 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 PLXNB1O43157 2135 aa5.44□□□□□ -1.54
VPS13A-201ENST00000355766 HYDINQ4G0P3 5121 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 SEC14L6B5MCN3 397 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 SCGB2A1O75556 95 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 BRI3O95415 125 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 CA2P00918 260 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 CRYGCP07315 174 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 FBP1P09467 338 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 FGF7P21781 194 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 RPL29P47914 159 aaKnown RBP5.43□□□□□ -1.54
VPS13A-201ENST00000355766 PPT1P50897 306 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 SELENOTP62341 195 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 WT1-ASQ06250 92 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 KLRD1Q13241 179 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 SSX2Q16385 188 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 ACOT6Q3I5F7 207 aaPredicted RBP5.43□□□□□ -1.54
VPS13A-201ENST00000355766 SLC16A13Q7RTY0 426 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 LHFPL4Q7Z7J7 247 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 KLHDC1Q8N7A1 406 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 TMEM116Q8NCL8 245 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 SUN5Q8TC36 379 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 MBD3L1Q8WWY6 194 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 SRSF12Q8WXF0 261 aaKnown RBP5.43□□□□□ -1.54
VPS13A-201ENST00000355766 P2RX4Q99571 388 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 SH3BGRL3Q9H299 93 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 PITPNC1Q9UKF7 332 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 F11RQ9Y624 299 aaKnown RBP5.43□□□□□ -1.54
VPS13A-201ENST00000355766 ARL2-SNX15V9GYD0 113 aa5.43□□□□□ -1.54
VPS13A-201ENST00000355766 IGHV3-72A0A0B4J1Y9 119 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 CTXND1A0A1B0GTU2 59 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 WI2-2373I1.2A0A1W2PRP0 233 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 CGB1A6NKQ9 187 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 TEX22C9J3V5 150 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 FABP1P07148 127 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 OR13C7P0DN81 318 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 TMEM11P17152 192 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 M6PRP20645 277 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 CRIP2P52943 208 aaPredicted RBP5.42□□□□□ -1.54
VPS13A-201ENST00000355766 ZNF616Q08AN1 781 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 PLGLAQ15195 96 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 TNXAQ16473 311 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 NSUN5P1Q3KNT7 163 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 DEFB121Q5J5C9 76 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 TOR2AQ5JU69 321 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 TMEM182Q6ZP80 229 aaPredicted RBP5.42□□□□□ -1.54
VPS13A-201ENST00000355766 SLC7A5P1Q8MH63 180 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 THAP8Q8NA92 274 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 OR4F17Q8NGA8 305 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 OR10G4Q8NGN3 311 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 ARPC1AQ92747 370 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 CXorf58Q96LI9 332 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 OR4F4Q96R69 305 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 RNF2Q99496 336 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 TXNDC17Q9BRA2 123 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 THYN1Q9P016 225 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 HILPDAQ9Y5L2 63 aa5.42□□□□□ -1.54
VPS13A-201ENST00000355766 LYSTQ99698 3801 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 A0A1W2PRD5 423 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 A0A1W2PRF3 423 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 A0A1W2PRM7 423 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 MT-CO2P00403 227 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 IFNA1P01562 189 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 CD5P06127 495 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 IGLL1P15814 213 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 HIST1H1BP16401 226 aaKnown RBP5.41□□□□□ -1.54
VPS13A-201ENST00000355766 CTRB1P17538 263 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 FCGR2BP31994 310 aaPredicted RBP5.41□□□□□ -1.54
VPS13A-201ENST00000355766 SSBP2P81877 361 aaPredicted RBP5.41□□□□□ -1.54
VPS13A-201ENST00000355766 RUNX1Q01196 453 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 AKR1C1Q04828 323 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 HES1Q14469 280 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 PEA15Q15121 130 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 SPINK9Q5DT21 86 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 CTRB2Q6GPI1 263 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 NDUFA11Q86Y39 141 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 TTC9CQ8N5M4 171 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 OR5R1Q8NH85 324 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 FAM213BQ8TBF2 198 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 RITA1Q96K30 269 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 RBM14Q96PK6 669 aaKnown RBP5.41□□□□□ -1.54
VPS13A-201ENST00000355766 GGTLC1Q9BX51 225 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 HINT2Q9BX68 163 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 ACTR3CQ9C0K3 210 aaPredicted RBP5.41□□□□□ -1.54
VPS13A-201ENST00000355766 FBXL15Q9H469 300 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 RPRMQ9NS64 109 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 GAR1Q9NY12 217 aaKnown RBP5.41□□□□□ -1.54
VPS13A-201ENST00000355766 RNF24Q9Y225 148 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 MOB4Q9Y3A3 225 aa5.41□□□□□ -1.54
VPS13A-201ENST00000355766 FAM96BQ9Y3D0 163 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 1169.3 ms