RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 TCL1AP56279 114 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 TEX43Q6ZNM6 134 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 ATP5L2Q7Z4Y8 100 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 C5orf17Q8NAS9 161 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 NUDT10Q8NFP7 164 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 NUDT11Q96G61 164 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 FMC1Q96HJ9 113 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 GPR82Q96P67 336 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 ZNF586Q9NXT0 402 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 PGPA6NDG6 321 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 TEX22C9J3V5 150 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 IGHV3-48P01763 117 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 FRMD6-AS1P0C7T7 363 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 OR8B3Q8NGG8 313 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 TSKUQ8WUA8 353 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 LINC00479Q96M42 142 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 OR8B2Q96RD0 313 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 ATG101Q9BSB4 218 aa12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 MRPL27Q9P0M9 148 aaKnown RBP12.37□□□□□ -0.43
TNFSF13-202ENST00000349228 LOC400499M0QZD8 3231 aa12.36□□□□□ -0.43
TNFSF13-202ENST00000349228 DSPP15924 2871 aaKnown RBP12.36□□□□□ -0.43
TNFSF13-202ENST00000349228 LY6LH3BQJ8 138 aa12.36□□□□□ -0.43
TNFSF13-202ENST00000349228 ZNF253O75346 499 aa12.36□□□□□ -0.43
TNFSF13-202ENST00000349228 CDKN1BP46527 198 aa12.36□□□□□ -0.43
TNFSF13-202ENST00000349228 FOXC1Q12948 553 aa12.36□□□□□ -0.43
TNFSF13-202ENST00000349228 MRPL54Q6P161 138 aaKnown RBP12.36□□□□□ -0.43
TNFSF13-202ENST00000349228 WFDC12Q8WWY7 111 aa12.36□□□□□ -0.43
TNFSF13-202ENST00000349228 KCNS1Q96KK3 526 aa12.36□□□□□ -0.43
TNFSF13-202ENST00000349228 C20orf144Q9BQM9 153 aa12.36□□□□□ -0.43
TNFSF13-202ENST00000349228 TMEM14CQ9P0S9 112 aa12.36□□□□□ -0.43
TNFSF13-202ENST00000349228 RPH3ALQ9UNE2 315 aa12.36□□□□□ -0.43
TNFSF13-202ENST00000349228 BMPR1BO00238 502 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 SPINK4O60575 86 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 TOMM40O96008 361 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 MOSP00540 346 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 LIPFP07098 398 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 ZNF672Q499Z4 452 aaPredicted RBP12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 CT83Q5H943 113 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 TPTE2P1Q5T6R2 138 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 LY6G5BQ8NDX9 201 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 C7orf69Q9H7B7 122 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 HIGD1AQ9Y241 93 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 SOX21Q9Y651 276 aaPredicted RBP12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 TCAPO15273 167 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 GP9P14770 177 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 TOMM20LQ6UXN7 152 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 ZNF492Q9P255 531 aa12.35□□□□□ -0.43
TNFSF13-202ENST00000349228 TRAV34A0A0B4J273 112 aa12.34□□□□□ -0.43
TNFSF13-202ENST00000349228 PLAUP00749 431 aa12.34□□□□□ -0.43
TNFSF13-202ENST00000349228 CNTFRP26992 372 aa12.34□□□□□ -0.43
TNFSF13-202ENST00000349228 NHLRC2Q8NBF2 726 aa12.34□□□□□ -0.43
TNFSF13-202ENST00000349228 SRSF12Q8WXF0 261 aaKnown RBP12.34□□□□□ -0.43
TNFSF13-202ENST00000349228 MLST8Q9BVC4 326 aa12.34□□□□□ -0.43
TNFSF13-202ENST00000349228 SRIP30626 198 aa12.33□□□□□ -0.43
TNFSF13-202ENST00000349228 SLC35B1P78383 322 aa12.33□□□□□ -0.43
TNFSF13-202ENST00000349228 NUP35Q8NFH5 326 aa12.33□□□□□ -0.43
TNFSF13-202ENST00000349228 LINC01560Q8TB33 94 aa12.33□□□□□ -0.43
TNFSF13-202ENST00000349228 BLNKQ8WV28 456 aa12.33□□□□□ -0.43
TNFSF13-202ENST00000349228 FAM168AQ92567 244 aa12.33□□□□□ -0.43
TNFSF13-202ENST00000349228 RAB1BQ9H0U4 201 aa12.33□□□□□ -0.43
TNFSF13-202ENST00000349228 OTORQ9NRC9 128 aa12.33□□□□□ -0.43
TNFSF13-202ENST00000349228 A0A1W2PS18 150 aa12.33□□□□□ -0.44
TNFSF13-202ENST00000349228 A8MWL6 223 aa12.33□□□□□ -0.44
TNFSF13-202ENST00000349228 I3L2K1 104 aa12.33□□□□□ -0.44
TNFSF13-202ENST00000349228 OR2J3O76001 311 aa12.33□□□□□ -0.44
TNFSF13-202ENST00000349228 IGLC1P0CG04 106 aa12.33□□□□□ -0.44
TNFSF13-202ENST00000349228 CEACAM3P40198 252 aa12.33□□□□□ -0.44
TNFSF13-202ENST00000349228 KLF5Q13887 457 aaPredicted RBP12.33□□□□□ -0.44
TNFSF13-202ENST00000349228 FAM162BQ5T6X4 162 aa12.33□□□□□ -0.44
TNFSF13-202ENST00000349228 C19orf35Q6ZS72 473 aa12.33□□□□□ -0.44
TNFSF13-202ENST00000349228 SCNM1Q9BWG6 230 aa12.33□□□□□ -0.44
TNFSF13-202ENST00000349228 FBXL15Q9H469 300 aa12.33□□□□□ -0.44
TNFSF13-202ENST00000349228 TRBV6-1A0A0K0K1D8 114 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 FAM231BA6NCW3 169 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 M0QZK8 103 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 M0R143 59 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 ZNF324O75467 553 aaPredicted RBP12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 LTAP01374 205 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 COX7A1P24310 79 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 UCNP55089 124 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 PLGLAQ15195 96 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 KIAA1644Q3SXP7 199 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 S100A7AQ86SG5 101 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 OR11H6Q8NGC7 330 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 TIMD4Q96H15 378 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 SSBP3Q9BWW4 388 aaPredicted RBP12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 PRSS22Q9GZN4 317 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 GFRA4Q9GZZ7 299 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 Q9H3A6 140 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 ZNF292O60281 2723 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 F2Z2F3 143 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 LYNX1G3V0Z9 82 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 TCRAP04437 139 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 FAM87AP0C7U9 286 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 LYNX1P0DP58 116 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 HTR1DP28221 377 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 AMTP48728 403 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 GNG5P63218 68 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 RASL11BQ9BPW5 248 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 VAMP8Q9BV40 100 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms