RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 KIR2DL5BQ8NHK3 375 aa11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 ENKURQ8TC29 256 aa11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 PPP1R14BQ96C90 147 aa11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 ZNF414Q96IQ9 312 aa11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 RAB40CQ96S21 281 aa11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 PBDC1Q9BVG4 233 aa11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 MS4A6AQ9H2W1 248 aa11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 SSSCA1O60232 199 aa11.73□□□□□ -0.53
TSPAN4-201ENST00000346501 LYL1P12980 280 aa11.73□□□□□ -0.53
TSPAN4-201ENST00000346501 POLR2GP62487 172 aaKnown RBP eCLIP11.73□□□□□ -0.53
TSPAN4-201ENST00000346501 AKR1C1Q04828 323 aa11.73□□□□□ -0.53
TSPAN4-201ENST00000346501 OR8G2PQ6IF36 304 aa11.73□□□□□ -0.53
TSPAN4-201ENST00000346501 OR4D5Q8NGN0 318 aa11.73□□□□□ -0.53
TSPAN4-201ENST00000346501 IL17DQ8TAD2 202 aa11.73□□□□□ -0.53
TSPAN4-201ENST00000346501 ZNF431Q8TF32 576 aaPredicted RBP11.73□□□□□ -0.53
TSPAN4-201ENST00000346501 RNF125Q96EQ8 232 aa11.73□□□□□ -0.53
TSPAN4-201ENST00000346501 C5orf51A6NDU8 294 aa11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 FAM25EA8MYX2 175 aa11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 H3BP45 60 aa11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 L7N2F9 121 aa11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 VAMP2P63027 116 aa11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 ASAH1Q13510 395 aa11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 Q6ZWC4 215 aa11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 APRG1Q8IVJ8 170 aa11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 C12orf45Q8N5I9 185 aaPredicted RBP11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 ZBTB8BQ8NAP8 495 aaPredicted RBP11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 SMIM8Q96KF7 97 aa11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 TRGV9Q99603 122 aa11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 GPN1Q9HCN4 374 aaPredicted RBP11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 FBXL17Q9UF56 701 aa11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 COL7A1Q02388 2944 aa11.72□□□□□ -0.53
TSPAN4-201ENST00000346501 SMCO3A2RU48 225 aa11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 MPTX1A8MV57 137 aa11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 UPK1BO75841 260 aa11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 RPL35AP18077 110 aaKnown RBP11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 DEFA1P59665 94 aa11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 DEFA3P59666 94 aa11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 DEFB131AP59861 70 aa11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 LYZP61626 148 aa11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 USF2Q15853 346 aaPredicted RBP11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 LILRB2Q8N423 598 aa11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 OR10P1Q8NGE3 313 aa11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 MAP6D1Q9H9H5 199 aa11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 RETNQ9HD89 108 aa11.71□□□□□ -0.53
TSPAN4-201ENST00000346501 PVALBP20472 110 aaPredicted RBP11.7□□□□□ -0.54
TSPAN4-201ENST00000346501 TAS2R30P59541 319 aa11.7□□□□□ -0.54
TSPAN4-201ENST00000346501 SNRPD3P62318 126 aaKnown RBP11.7□□□□□ -0.54
TSPAN4-201ENST00000346501 C16orf54Q6UWD8 224 aa11.7□□□□□ -0.54
TSPAN4-201ENST00000346501 S100A7AQ86SG5 101 aa11.7□□□□□ -0.54
TSPAN4-201ENST00000346501 STHQ8IWL8 128 aa11.7□□□□□ -0.54
TSPAN4-201ENST00000346501 BPIFCQ8NFQ6 507 aa11.7□□□□□ -0.54
TSPAN4-201ENST00000346501 MGAT4CQ9UBM8 478 aa11.7□□□□□ -0.54
TSPAN4-201ENST00000346501 TP53TG1Q9Y2A0 90 aa11.7□□□□□ -0.54
TSPAN4-201ENST00000346501 U3KQE9 123 aa11.7□□□□□ -0.54
TSPAN4-201ENST00000346501 TSC22D2O75157 780 aa11.69□□□□□ -0.54
TSPAN4-201ENST00000346501 ZNF90Q03938 601 aa11.69□□□□□ -0.54
TSPAN4-201ENST00000346501 OR2F1Q13607 317 aa11.69□□□□□ -0.54
TSPAN4-201ENST00000346501 GSG1LQ6UXU4 331 aa11.69□□□□□ -0.54
TSPAN4-201ENST00000346501 SIGLEC15Q6ZMC9 328 aa11.69□□□□□ -0.54
TSPAN4-201ENST00000346501 ACOT7LQ6ZUV0 252 aa11.69□□□□□ -0.54
TSPAN4-201ENST00000346501 THAP8Q8NA92 274 aa11.69□□□□□ -0.54
TSPAN4-201ENST00000346501 GLMPQ8WWB7 406 aa11.69□□□□□ -0.54
TSPAN4-201ENST00000346501 SEC22CQ9BRL7 303 aa11.69□□□□□ -0.54
TSPAN4-201ENST00000346501 CSTL1Q9H114 145 aa11.69□□□□□ -0.54
TSPAN4-201ENST00000346501 DNAH9Q9NYC9 4486 aa11.68□□□□□ -0.54
TSPAN4-201ENST00000346501 STAB2Q8WWQ8 2551 aa11.68□□□□□ -0.54
TSPAN4-201ENST00000346501 K7EQG2 157 aa11.68□□□□□ -0.54
TSPAN4-201ENST00000346501 SPRY2O43597 315 aa11.68□□□□□ -0.54
TSPAN4-201ENST00000346501 BUB3O43684 328 aa11.68□□□□□ -0.54
TSPAN4-201ENST00000346501 C1orf194Q5T5A4 169 aa11.68□□□□□ -0.54
TSPAN4-201ENST00000346501 TMEM144Q7Z5S9 345 aa11.68□□□□□ -0.54
TSPAN4-201ENST00000346501 EDA2RQ9HAV5 297 aa11.68□□□□□ -0.54
TSPAN4-201ENST00000346501 NRN1Q9NPD7 142 aa11.68□□□□□ -0.54
TSPAN4-201ENST00000346501 TBC1D24Q9ULP9 559 aa11.68□□□□□ -0.54
TSPAN4-201ENST00000346501 IGKV1D-37A0A075B6S9 117 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 CCSO14618 274 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 IL5P05113 134 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 METTL15P1P0C7V9 234 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 ZNF688P0C7X2 276 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 BCAP31P51572 246 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 DLK1P80370 383 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 DEFB135Q30KP9 77 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 SAMD13Q5VXD3 122 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 LEMD1Q68G75 181 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 OR8I2Q8N0Y5 310 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 C2orf50Q96LR7 162 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 TMEM147Q9BVK8 224 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 SEPSECSQ9HD40 501 aaKnown RBP11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 SLC45A2Q9UMX9 530 aa11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 LSM5Q9Y4Y9 91 aaKnown RBP11.67□□□□□ -0.54
TSPAN4-201ENST00000346501 PRSS46E5RG02 174 aa11.66□□□□□ -0.54
TSPAN4-201ENST00000346501 FNDC10F2Z333 226 aa11.66□□□□□ -0.54
TSPAN4-201ENST00000346501 PRAF2O60831 178 aa11.66□□□□□ -0.54
TSPAN4-201ENST00000346501 MBPP02686 304 aaPredicted RBP11.66□□□□□ -0.54
TSPAN4-201ENST00000346501 ID1P41134 155 aa11.66□□□□□ -0.54
TSPAN4-201ENST00000346501 RAP2BP61225 183 aa11.66□□□□□ -0.54
TSPAN4-201ENST00000346501 SELENOTP62341 195 aa11.66□□□□□ -0.54
TSPAN4-201ENST00000346501 TMEM217Q8N7C4 229 aa11.66□□□□□ -0.54
TSPAN4-201ENST00000346501 OVOL2Q9BRP0 275 aa11.66□□□□□ -0.54
TSPAN4-201ENST00000346501 NPVFQ9HCQ7 196 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms