RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 GAR1Q9NY12 217 aaKnown RBP16.77■□□□□ 0.27
TSPAN3-202ENST00000346495 LINC00527Q9UJ94 153 aa16.77■□□□□ 0.27
TSPAN3-202ENST00000346495 ZNF580Q9UK33 172 aa16.77■□□□□ 0.27
TSPAN3-202ENST00000346495 CELSR1Q9NYQ6 3014 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 H3BUA1 57 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 OR7C2O60412 319 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 BRI3O95415 125 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 CD81P60033 236 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 LYZP61626 148 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 KRTAP1-1Q07627 177 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 ZNF502Q8TBZ5 544 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 EEF1AKMT3Q96AZ1 226 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 FAM167A-AS1Q96KT0 104 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 UHRF2Q96PU4 802 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 TXNDC17Q9BRA2 123 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 SLC25A2Q9BXI2 301 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 CREBBPQ92793 2442 aa16.76■□□□□ 0.27
TSPAN3-202ENST00000346495 FAM223BA6NKX1 122 aa16.75■□□□□ 0.27
TSPAN3-202ENST00000346495 HOXA3O43365 443 aaPredicted RBP16.75■□□□□ 0.27
TSPAN3-202ENST00000346495 SNAPINO95295 136 aa16.75■□□□□ 0.27
TSPAN3-202ENST00000346495 IGHV3-23P01764 117 aa16.75■□□□□ 0.27
TSPAN3-202ENST00000346495 CEBPGP53567 150 aa16.75■□□□□ 0.27
TSPAN3-202ENST00000346495 UBE2G2P60604 165 aa16.75■□□□□ 0.27
TSPAN3-202ENST00000346495 MORN5Q5VZ52 161 aa16.75■□□□□ 0.27
TSPAN3-202ENST00000346495 Q6ZS46 218 aa16.75■□□□□ 0.27
TSPAN3-202ENST00000346495 FAM223AQ8IWN6 122 aa16.75■□□□□ 0.27
TSPAN3-202ENST00000346495 MS4A10Q96PG2 267 aa16.75■□□□□ 0.27
TSPAN3-202ENST00000346495 HIGD1AQ9Y241 93 aa16.75■□□□□ 0.27
TSPAN3-202ENST00000346495 C11orf94C9JXX5 98 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 PPIFP30405 207 aaKnown RBP16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 SRP14P37108 136 aaKnown RBP16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 IL17RELQ6ZVW7 336 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 OR5AU1Q8NGC0 362 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 OR4F5Q8NH21 305 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 Q8WTZ3 238 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 ZNF503Q96F45 646 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 OR4F4Q96R69 305 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 ARL2-SNX15V9GYD0 113 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 TRBV7-1A0A0A6YYK4 115 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 TRAV5A0A0B4J249 113 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 OR2T8A6NH00 312 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 TMEM250H0YL14 139 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 SCO1O75880 301 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 ATP5G2Q06055 141 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 CST9LP1Q5W188 147 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 STXBP6Q8NFX7 210 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 SUN5Q8TC36 379 aa16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 NOL4LQ96MY1 436 aaPredicted RBP16.74■□□□□ 0.27
TSPAN3-202ENST00000346495 SVEP1Q4LDE5 3571 aa16.73■□□□□ 0.27
TSPAN3-202ENST00000346495 UNC79Q9P2D8 2635 aa16.73■□□□□ 0.27
TSPAN3-202ENST00000346495 WI2-2373I1.2A0A1W2PRP0 233 aa16.73■□□□□ 0.27
TSPAN3-202ENST00000346495 NUPL2O15504 423 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-202ENST00000346495 TRGV3P03979 118 aa16.73■□□□□ 0.27
TSPAN3-202ENST00000346495 ATRAIDQ6UW56 229 aa16.73■□□□□ 0.27
TSPAN3-202ENST00000346495 ATP6V0BQ99437 205 aa16.73■□□□□ 0.27
TSPAN3-202ENST00000346495 NKX6-2Q9C056 277 aaPredicted RBP16.73■□□□□ 0.27
TSPAN3-202ENST00000346495 YAE1D1Q9NRH1 226 aa16.73■□□□□ 0.27
TSPAN3-202ENST00000346495 MRPL27Q9P0M9 148 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-202ENST00000346495 ITPR3Q14573 2671 aa16.73■□□□□ 0.27
TSPAN3-202ENST00000346495 PDE6DO43924 150 aa16.72■□□□□ 0.27
TSPAN3-202ENST00000346495 OR2C1O95371 312 aa16.72■□□□□ 0.27
TSPAN3-202ENST00000346495 CTSGP08311 255 aa16.72■□□□□ 0.27
TSPAN3-202ENST00000346495 FAM90A2PQ658T7 463 aa16.72■□□□□ 0.27
TSPAN3-202ENST00000346495 SIGLECL1Q8N7X8 197 aa16.72■□□□□ 0.27
TSPAN3-202ENST00000346495 ZNF491Q8N8L2 437 aa16.72■□□□□ 0.27
TSPAN3-202ENST00000346495 RNF125Q96EQ8 232 aa16.72■□□□□ 0.27
TSPAN3-202ENST00000346495 PAXXQ9BUH6 204 aa16.72■□□□□ 0.27
TSPAN3-202ENST00000346495 IL4P05112 153 aa16.71■□□□□ 0.27
TSPAN3-202ENST00000346495 S100A7AQ86SG5 101 aa16.71■□□□□ 0.27
TSPAN3-202ENST00000346495 CLRN3Q8NCR9 226 aa16.71■□□□□ 0.27
TSPAN3-202ENST00000346495 PRSS22Q9GZN4 317 aa16.71■□□□□ 0.27
TSPAN3-202ENST00000346495 OR51M1Q9H341 326 aa16.71■□□□□ 0.27
TSPAN3-202ENST00000346495 ZANQ9Y493 2812 aa16.71■□□□□ 0.27
TSPAN3-202ENST00000346495 FAM74A7A6NL05 159 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 F6UZH7 168 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 OR10J4P0C629 311 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 HNF1AP20823 631 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 GPR183P32249 361 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 ATP5G3P48201 142 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 UBE2L3P68036 154 aaKnown RBP16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 TMEM86BQ8N661 226 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 SLC25A39Q9BZJ4 359 aaPredicted RBP16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 NPFFR1Q9GZQ6 430 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 YTHDF2Q9Y5A9 579 aaKnown RBP16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 CLEC3BP05452 202 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 TPPP2P59282 170 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 CFHR3Q02985 330 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 USMG5Q96IX5 58 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 CCDC140Q96MF4 163 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 CHRDL1Q9BU40 450 aa16.7■□□□□ 0.26
TSPAN3-202ENST00000346495 IGLV1-40P01703 118 aa16.69■□□□□ 0.26
TSPAN3-202ENST00000346495 ADMP35318 185 aa16.69■□□□□ 0.26
TSPAN3-202ENST00000346495 KIAA0141Q14154 515 aaPredicted RBP16.69■□□□□ 0.26
TSPAN3-202ENST00000346495 CLEC19AQ6UXS0 136 aa16.69■□□□□ 0.26
TSPAN3-202ENST00000346495 ZNF600Q6ZNG1 722 aa16.69■□□□□ 0.26
TSPAN3-202ENST00000346495 NIPSNAP3BQ9BS92 247 aa16.69■□□□□ 0.26
TSPAN3-202ENST00000346495 PUS1Q9Y606 427 aaKnown RBP eCLIP16.69■□□□□ 0.26
TSPAN3-202ENST00000346495 H3BQ15 152 aa16.68■□□□□ 0.26
TSPAN3-202ENST00000346495 PYYP10082 97 aa16.68■□□□□ 0.26
TSPAN3-202ENST00000346495 FAM74A3Q4VXF1 159 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms