RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 VSIRQ9H7M9 311 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 CCDC168Q8NDH2 2452 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 HIVEP2P31629 2446 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 TRBV6-6A0A0A6YYG2 114 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 Q6ZUT4 128 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 TIMM13Q9Y5L4 95 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-202ENST00000344113 LAMB1P07942 1786 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 H0YGX0 51 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 ADMP35318 185 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 TOPAZ1Q8N9V7 1692 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 D6R8Y8 96 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 FAM27D1Q5T7N8 215 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 C9orf47Q6ZRZ4 202 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 MUSTN1Q8IVN3 82 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 CYB5D2Q8WUJ1 264 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 SRSF12Q8WXF0 261 aaKnown RBP3.13□□□□□ -1.91
SYNE2-202ENST00000344113 CLEC7AQ9BXN2 247 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 SERP1Q9Y6X1 66 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 SNAI2O43623 268 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 ADAMTS7Q9UKP4 1686 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 FAM57AQ8TBR7 257 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 NDUFA3O95167 84 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 IGHV3-7P01780 117 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 VCYO14598 125 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 NDUFS5O43920 106 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 PSMB8P28062 276 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 NABP1Q96AH0 204 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 SRSF8Q9BRL6 282 aaKnown RBP3.13□□□□□ -1.91
SYNE2-202ENST00000344113 CHCHD2Q9Y6H1 151 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-202ENST00000344113 GBF1Q92538 1859 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 E9PLD3 99 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 JMJD7-PLA2G4BH0Y9G9 81 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 ZNF137PP52743 207 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 IL17RELQ6ZVW7 336 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 SARAFQ96BY9 339 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 CGB1A6NKQ9 187 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 PRIMA1Q86XR5 153 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 RCHY1Q96PM5 261 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 MIA3Q5JRA6 1907 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 LOXP28300 417 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-202ENST00000344113 CBLN3Q6UW01 205 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 SHISA2Q6UWI4 295 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 SIGLEC15Q6ZMC9 328 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 LYZL2Q7Z4W2 148 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 NAA38Q9BRA0 125 aaKnown RBP3.13□□□□□ -1.91
SYNE2-202ENST00000344113 PTPRFP10586 1907 aa3.13□□□□□ -1.91
SYNE2-202ENST00000344113 FGF12P61328 243 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 TMEM52BQ4KMG9 183 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 ADAMTSL4Q6UY14 1074 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 CXCL6P80162 114 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 HAPLN4Q86UW8 402 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 GFRA1P56159 465 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 Q6ZVL8 140 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 MDFICQ9P1T7 246 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 MTCL1Q9Y4B5 1905 aaKnown RBP3.12□□□□□ -1.91
SYNE2-202ENST00000344113 H0YIZ8 118 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 FOXF1Q12946 379 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 C3orf79P0CE67 100 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 FAM53BQ14153 422 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 CLEC4CQ8WTT0 213 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 PRSS27Q9BQR3 290 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 REPIN1Q9BWE0 567 aaKnown RBP3.12□□□□□ -1.91
SYNE2-202ENST00000344113 MYBPHLA2RUH7 354 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 EDIL3O43854 480 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 B9D1Q9UPM9 204 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 NRXN3Q9Y4C0 1643 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 PRSS29PA6NIE9 313 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 NDUFB8O95169 186 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 RARRES3Q9UL19 164 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 TEX48A0A1B0GUV7 120 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 NPIPB5A8MRT5 1133 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 HCRTO43612 131 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 PCSK4Q6UW60 755 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 NPWQ8N729 165 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 TMEM178AQ8NBL3 297 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 NABP2Q9BQ15 211 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 PEAK1Q9H792 1746 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 J3QT63 122 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 CECR9P0C854 216 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 FGFRL1Q8N441 504 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 MANSC4A6NHS7 340 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-202ENST00000344113 LIM2P55344 173 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 SERTAD4-AS1Q5TG53 156 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 FOXA3P55318 350 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-202ENST00000344113 PMAIP1Q13794 54 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 FOXA2Q9Y261 457 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-202ENST00000344113 CTSBP07858 339 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 LINC00479Q96M42 142 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 SCRT2Q9NQ03 307 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 H3BP45 60 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 C3AR1Q16581 482 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 PHF7Q9BWX1 381 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-202ENST00000344113 TRAV12-2A0A075B6T6 113 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 CELA3AP09093 270 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 RGPD8O14715 1765 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-202ENST00000344113 RGPD5Q99666 1765 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 SSR4P51571 173 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 ESM1Q9NQ30 184 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 PRR31Q5SQ13 230 aa3.12□□□□□ -1.91
SYNE2-202ENST00000344113 DLG5Q8TDM6 1919 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms