RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 SEPSECSQ9HD40 501 aaKnown RBP9.61□□□□□ -0.87
TRAK1-202ENST00000341421 TMEM238C9JI98 176 aa9.61□□□□□ -0.87
TRAK1-202ENST00000341421 C15orf65H3BRN8 121 aa9.61□□□□□ -0.87
TRAK1-202ENST00000341421 GOSR1O95249 250 aa9.61□□□□□ -0.87
TRAK1-202ENST00000341421 GATA4P43694 442 aa9.61□□□□□ -0.87
TRAK1-202ENST00000341421 ZNF788Q6ZQV5 615 aa9.61□□□□□ -0.87
TRAK1-202ENST00000341421 SLC25A48Q6ZT89 311 aaKnown RBP9.61□□□□□ -0.87
TRAK1-202ENST00000341421 CD5LO43866 347 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 VDAC2P45880 294 aaPredicted RBP9.6□□□□□ -0.87
TRAK1-202ENST00000341421 HBBP68871 147 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 SCGB1D4Q6XE38 83 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 ODF3L1Q8IXM7 274 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 TMEM190Q8WZ59 177 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 PGLYRP4Q96LB8 373 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 MOSP00540 346 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 LINC00205P59089 165 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 ARF6P62330 175 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 TEX45Q8NA69 505 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 SNRNP40Q96DI7 357 aaKnown RBP9.6□□□□□ -0.87
TRAK1-202ENST00000341421 GAFA1Q96PS6 74 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 CSTL1Q9H114 145 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 ABCA4P78363 2273 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 MUC21A0A0G2JKD1 596 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 MUC21A0A140T8X8 626 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 IGLC7A0M8Q6 106 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 OR2T8A6NH00 312 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 CCL21O00585 134 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 FOXA3P55318 350 aaPredicted RBP9.6□□□□□ -0.87
TRAK1-202ENST00000341421 SEC11AP67812 179 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 MUC21Q5SSG8 566 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 Q6ZS92 163 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 EML5Q05BV3 1969 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 VWC2Q2TAL6 325 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 TMEM167AQ8TBQ9 72 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 FMC1Q96HJ9 113 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 GPR82Q96P67 336 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 TMEM14BQ9NUH8 114 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 HILPDAQ9Y5L2 63 aa9.6□□□□□ -0.87
TRAK1-202ENST00000341421 FAM71F2Q6NXP2 309 aa9.59□□□□□ -0.87
TRAK1-202ENST00000341421 RAB37Q96AX2 223 aa9.59□□□□□ -0.87
TRAK1-202ENST00000341421 FNDC4Q9H6D8 234 aaPredicted RBP9.59□□□□□ -0.87
TRAK1-202ENST00000341421 MFAP4P55083 255 aa9.59□□□□□ -0.87
TRAK1-202ENST00000341421 ZNF474Q6S9Z5 364 aaPredicted RBP9.59□□□□□ -0.87
TRAK1-202ENST00000341421 TMEM133Q9H2Q1 129 aa9.59□□□□□ -0.87
TRAK1-202ENST00000341421 IGLL1P15814 213 aa9.59□□□□□ -0.87
TRAK1-202ENST00000341421 NPPCP23582 126 aa9.59□□□□□ -0.87
TRAK1-202ENST00000341421 SPATA31B1PQ5VZV4 182 aa9.59□□□□□ -0.87
TRAK1-202ENST00000341421 TMEM136Q6ZRR5 245 aa9.59□□□□□ -0.87
TRAK1-202ENST00000341421 GPR6P46095 362 aaPredicted RBP9.59□□□□□ -0.87
TRAK1-202ENST00000341421 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.58□□□□□ -0.886e-7■■■□□ 15.4
TRAK1-202ENST00000341421 BMI1P35226 326 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 RASL11AQ6T310 242 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 COL5A1P20908 1838 aaPredicted RBP9.58□□□□□ -0.88
TRAK1-202ENST00000341421 HTN1P15515 57 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 HOXA4Q00056 320 aaPredicted RBP9.58□□□□□ -0.88
TRAK1-202ENST00000341421 ZNF841Q6ZN19 808 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 C11orf53Q8IXP5 236 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 ABHD17AQ96GS6 310 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 MS4A6AQ9H2W1 248 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 JKAMPQ9P055 326 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 H3BUT2 72 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 NDUFB8O95169 186 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 RPL13AP40429 203 aaKnown RBP9.58□□□□□ -0.88
TRAK1-202ENST00000341421 PAX2Q02962 417 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 OR2K2Q8NGT1 345 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 SLC25A33Q9BSK2 321 aa9.58□□□□□ -0.88
TRAK1-202ENST00000341421 PSG9Q00887 426 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 SRSF9Q13242 221 aaKnown RBP eCLIP9.57□□□□□ -0.88
TRAK1-202ENST00000341421 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 C18orf32Q8TCD1 76 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 Q8TCH9 128 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 RNASE6Q93091 150 aaKnown RBP9.57□□□□□ -0.88
TRAK1-202ENST00000341421 RPP21Q9H633 154 aaKnown RBP9.57□□□□□ -0.88
TRAK1-202ENST00000341421 SPCS1Q9Y6A9 102 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 FREM1Q5H8C1 2179 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 CGB1A6NKQ9 187 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 ECSCRQ19T08 205 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 OR10AG1Q8NH19 301 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 RCHY1Q96PM5 261 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 PLCE1Q9P212 2302 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 EPDR1Q9UM22 224 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 IGHV3-35A0A0C4DH35 117 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 TMPRSS3P57727 454 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 Q6ZPA2 131 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 OR10W1Q8NGF6 305 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 OR5A1Q8NGJ0 315 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 SRSF12Q8WXF0 261 aaKnown RBP9.57□□□□□ -0.88
TRAK1-202ENST00000341421 DPM3Q9P2X0 92 aa9.57□□□□□ -0.88
TRAK1-202ENST00000341421 CEP192Q8TEP8 1941 aa9.56□□□□□ -0.88
TRAK1-202ENST00000341421 H0YJW9 148 aa9.56□□□□□ -0.88
TRAK1-202ENST00000341421 TMEM178BH3BS89 294 aa9.56□□□□□ -0.88
TRAK1-202ENST00000341421 RNASE2P10153 161 aaKnown RBP9.56□□□□□ -0.88
TRAK1-202ENST00000341421 IGFL3Q6UXB1 125 aa9.56□□□□□ -0.88
TRAK1-202ENST00000341421 GOLT1AQ6ZVE7 132 aa9.56□□□□□ -0.88
TRAK1-202ENST00000341421 V9GYV3 84 aa9.56□□□□□ -0.88
TRAK1-202ENST00000341421 IGLV3-9A0A075B6K5 115 aa9.56□□□□□ -0.88
TRAK1-202ENST00000341421 hDV102S1A0JD36 115 aa9.56□□□□□ -0.88
TRAK1-202ENST00000341421 TMEM189A5PLL7 270 aa9.56□□□□□ -0.88
TRAK1-202ENST00000341421 SNAI2O43623 268 aa9.56□□□□□ -0.88
TRAK1-202ENST00000341421 TWIST1Q15672 202 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms