RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ZNF318Q5VUA4 2279 aa12.16□□□□□ -0.46
RRP1B-201ENST00000340648 IGHV1-46P01743 117 aa12.16□□□□□ -0.46
RRP1B-201ENST00000340648 ZNF407Q9C0G0 2248 aa12.16□□□□□ -0.46
RRP1B-201ENST00000340648 THADAQ6YHU6 1953 aa12.16□□□□□ -0.46
RRP1B-201ENST00000340648 C21orf62Q9NYP8 219 aa12.16□□□□□ -0.46
RRP1B-201ENST00000340648 EP300Q09472 2414 aaPredicted RBP12.16□□□□□ -0.46
RRP1B-201ENST00000340648 YPEL3P61236 119 aaPredicted RBP12.15□□□□□ -0.46
RRP1B-201ENST00000340648 A0A1B0GWB2 263 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 SYS1-DBNDD2H3BUS1 97 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 WDR86Q86TI4 376 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 PPP1R27Q86WC6 154 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 OR2K2Q8NGT1 345 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 M0R381 172 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 ZNF883P0CG24 379 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 RNF125Q96EQ8 232 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 MRPL16Q9NX20 251 aaKnown RBP12.15□□□□□ -0.46
RRP1B-201ENST00000340648 GOLGB1Q14789 3259 aaKnown RBP12.15□□□□□ -0.46
RRP1B-201ENST00000340648 DOCK8Q8NF50 2099 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 TRAV8-1A0A0A6YYK1 113 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 FXYD7P58549 80 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 C8orf46Q8TAG6 207 aa12.15□□□□□ -0.46
RRP1B-201ENST00000340648 NDUFA3O95167 84 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 IGKV1-16P04430 117 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 TCRAP04437 139 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 C18orf32Q8TCD1 76 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 NEUROG1Q92886 237 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 MS4A6AQ9H2W1 248 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 ATP5LO75964 103 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 CD24P25063 80 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 SCRT1Q9BWW7 348 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 COX11Q9Y6N1 276 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 POLEQ07864 2286 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 LOC105371242A0A075B767 164 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 OR4X2Q8NGF9 303 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 DPM3Q9P2X0 92 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 SPTBN2O15020 2390 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 PPIFP30405 207 aaKnown RBP12.14□□□□□ -0.47
RRP1B-201ENST00000340648 SEC11AP67812 179 aa12.14□□□□□ -0.47
RRP1B-201ENST00000340648 PSG1P11464 419 aa12.13□□□□□ -0.47
RRP1B-201ENST00000340648 ZNF418Q8TF45 676 aaPredicted RBP12.13□□□□□ -0.47
RRP1B-201ENST00000340648 TICRRQ7Z2Z1 1910 aa12.13□□□□□ -0.47
RRP1B-201ENST00000340648 IGLC2P0DOY2 106 aa12.13□□□□□ -0.47
RRP1B-201ENST00000340648 IGLC3P0DOY3 106 aa12.13□□□□□ -0.47
RRP1B-201ENST00000340648 NPPCP23582 126 aa12.13□□□□□ -0.47
RRP1B-201ENST00000340648 IFI27L1Q96BM0 104 aa12.13□□□□□ -0.47
RRP1B-201ENST00000340648 TMEM133Q9H2Q1 129 aa12.13□□□□□ -0.47
RRP1B-201ENST00000340648 SH2D7A6NKC9 451 aaPredicted RBP12.13□□□□□ -0.47
RRP1B-201ENST00000340648 RNASE2P10153 161 aaKnown RBP12.13□□□□□ -0.47
RRP1B-201ENST00000340648 PMS2P5A8MQ11 134 aa12.13□□□□□ -0.47
RRP1B-201ENST00000340648 SAMD13Q5VXD3 122 aa12.13□□□□□ -0.47
RRP1B-201ENST00000340648 V9GYV3 84 aa12.13□□□□□ -0.47
RRP1B-201ENST00000340648 F2Z2F3 143 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 EVI2AP22794 236 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 ZNF329Q86UD4 541 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 LINC01560Q8TB33 94 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 ZNRD1Q9P1U0 126 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 GPR179Q6PRD1 2367 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 B9A039 149 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 SFTPCP11686 197 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 GUSBP1Q15486 140 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 D6R8Y8 96 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 NCR2O95944 276 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 PF4V1P10720 104 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 LGALS3P17931 250 aaKnown RBP12.12□□□□□ -0.47
RRP1B-201ENST00000340648 RAB9AP51151 201 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 ASPHD1Q5U4P2 390 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 SLC25A48Q6ZT89 311 aaKnown RBP12.12□□□□□ -0.47
RRP1B-201ENST00000340648 DPF1Q92782 380 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 SCGB3A1Q96QR1 104 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 MRPS16Q9Y3D3 137 aaKnown RBP12.12□□□□□ -0.47
RRP1B-201ENST00000340648 MYO7BQ6PIF6 2116 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 ZNF106Q9H2Y7 1883 aaKnown RBP12.12□□□□□ -0.47
RRP1B-201ENST00000340648 PRSS2P07478 247 aa12.12□□□□□ -0.47
RRP1B-201ENST00000340648 ID1P41134 155 aa12.11□□□□□ -0.47
RRP1B-201ENST00000340648 HSD52Q0P140 79 aa12.11□□□□□ -0.47
RRP1B-201ENST00000340648 FAM74A4Q5TZK3 123 aa12.11□□□□□ -0.47
RRP1B-201ENST00000340648 SFTA2Q6UW10 78 aa12.11□□□□□ -0.47
RRP1B-201ENST00000340648 APOBEC3AP31941 199 aaPredicted RBP12.11□□□□□ -0.47
RRP1B-201ENST00000340648 PRSS8Q16651 343 aa12.11□□□□□ -0.47
RRP1B-201ENST00000340648 ARPC1AQ92747 370 aa12.11□□□□□ -0.47
RRP1B-201ENST00000340648 ASCL2Q99929 193 aa12.11□□□□□ -0.47
RRP1B-201ENST00000340648 AKAP6Q13023 2319 aa12.11□□□□□ -0.47
RRP1B-201ENST00000340648 VDAC2P45880 294 aaPredicted RBP12.11□□□□□ -0.47
RRP1B-201ENST00000340648 A0A1B0GV72 72 aa12.11□□□□□ -0.47
RRP1B-201ENST00000340648 SLAQ13239 276 aa12.11□□□□□ -0.47
RRP1B-201ENST00000340648 PVRIGQ6DKI7 326 aa12.11□□□□□ -0.47
RRP1B-201ENST00000340648 HEATR1Q9H583 2144 aaKnown RBP12.11□□□□□ -0.47
RRP1B-201ENST00000340648 COL4A4P53420 1690 aaPredicted RBP12.11□□□□□ -0.47
RRP1B-201ENST00000340648 GGTLC3B5MD39 225 aa12.1□□□□□ -0.47
RRP1B-201ENST00000340648 H0YJW9 148 aa12.1□□□□□ -0.47
RRP1B-201ENST00000340648 TMEM167AQ8TBQ9 72 aa12.1□□□□□ -0.47
RRP1B-201ENST00000340648 SLC25A39Q9BZJ4 359 aaPredicted RBP12.1□□□□□ -0.47
RRP1B-201ENST00000340648 RAXQ9Y2V3 346 aa12.1□□□□□ -0.47
RRP1B-201ENST00000340648 APOMO95445 188 aa12.1□□□□□ -0.47
RRP1B-201ENST00000340648 TGFAP01135 160 aa12.1□□□□□ -0.47
RRP1B-201ENST00000340648 IGKV3-15P01624 115 aa12.1□□□□□ -0.47
RRP1B-201ENST00000340648 TMEM170BQ5T4T1 132 aa12.1□□□□□ -0.47
RRP1B-201ENST00000340648 NPIPB5A8MRT5 1133 aa12.1□□□□□ -0.47
RRP1B-201ENST00000340648 FABP5P3A8MUU1 101 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms