RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 NIT1Q86X76 327 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 FAM167A-AS1Q96KT0 104 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 CCDC168Q8NDH2 2452 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 H0YJW9 148 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 FAM87AP0C7U9 286 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 OR8B2Q96RD0 313 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 PMCHL2Q9BQD1 86 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 GAL3ST2Q9H3Q3 398 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 TNFRSF19Q9NS68 423 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 S4R3C0 116 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 FAM90A27PA6NNH2 459 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 HYPMO75409 117 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 BPIFB3P59826 476 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 CR1LQ2VPA4 569 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 SPACA3Q8IXA5 215 aa11.64□□□□□ -0.55
CPSF7-201ENST00000340437 DAZAP1Q96EP5 407 aaKnown RBP11.64□□□□□ -0.55
CPSF7-201ENST00000340437 COL27A1Q8IZC6 1860 aaPredicted RBP11.63□□□□□ -0.55
CPSF7-201ENST00000340437 CNTFRP26992 372 aa11.63□□□□□ -0.55
CPSF7-201ENST00000340437 ZNF257Q9Y2Q1 563 aa11.63□□□□□ -0.55
CPSF7-201ENST00000340437 LY96Q9Y6Y9 160 aa11.63□□□□□ -0.55
CPSF7-201ENST00000340437 CFHR2P36980 270 aa11.63□□□□□ -0.55
CPSF7-201ENST00000340437 UNQ5815/PRO19632Q6UWF5 114 aa11.63□□□□□ -0.55
CPSF7-201ENST00000340437 ZNF329Q86UD4 541 aa11.63□□□□□ -0.55
CPSF7-201ENST00000340437 IGF2BP2-AS1Q96M15 143 aa11.63□□□□□ -0.55
CPSF7-201ENST00000340437 UQCR10Q9UDW1 63 aa11.63□□□□□ -0.55
CPSF7-201ENST00000340437 PRRX1P54821 245 aa11.63□□□□□ -0.55
CPSF7-201ENST00000340437 LYZP61626 148 aa11.63□□□□□ -0.55
CPSF7-201ENST00000340437 GFRALQ6UXV0 394 aa11.63□□□□□ -0.55
CPSF7-201ENST00000340437 NDUFA4L2Q9NRX3 87 aa11.63□□□□□ -0.55
CPSF7-201ENST00000340437 POLQO75417 2590 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 SMIM27A0A1W2PRY6 76 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 LYNX1G3V0Z9 82 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 LYNX1P0DP58 116 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 SUB1P53999 127 aaKnown RBP eCLIP11.62□□□□□ -0.55
CPSF7-201ENST00000340437 PLGLAQ15195 96 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 OR10J3Q5JRS4 329 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 BET1LQ9NYM9 111 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 LAMTOR2Q9Y2Q5 125 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 NDUFB3O43676 98 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 COX7A1P24310 79 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 Q8N976 141 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 ASCL3Q9NQ33 180 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 C1orf185Q5T7R7 199 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 OR4C13Q8NGP0 309 aa11.62□□□□□ -0.55
CPSF7-201ENST00000340437 MBD3L4A6NDZ8 208 aaPredicted RBP11.61□□□□□ -0.55
CPSF7-201ENST00000340437 MBD3L3A6NE82 208 aaPredicted RBP11.61□□□□□ -0.55
CPSF7-201ENST00000340437 MBD3L5A6NJ08 208 aaPredicted RBP11.61□□□□□ -0.55
CPSF7-201ENST00000340437 TNFRSF1AP19438 455 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 OR1L4Q8NGR5 311 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 MBD3L2Q8NHZ7 208 aaPredicted RBP11.61□□□□□ -0.55
CPSF7-201ENST00000340437 OSR1Q8TAX0 266 aaPredicted RBP11.61□□□□□ -0.55
CPSF7-201ENST00000340437 PPIAL4EA0A075B759 164 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 PPIAL4DF5H284 164 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 RBP4P02753 201 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 PPIAL4FP0DN26 164 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 IGLC2P0DOY2 106 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 IGLC3P0DOY3 106 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 TMEM177Q53S58 311 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 LINC00312Q9Y6C7 94 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 PRRG2O14669 202 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 NBEAP1P0C6P0 100 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 EBLN2Q6P2I7 272 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 TMEM108Q6UXF1 575 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 CHODLQ9H9P2 273 aa11.61□□□□□ -0.55
CPSF7-201ENST00000340437 RELNP78509 3460 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 RAI1Q7Z5J4 1906 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-201ENST00000340437 IGLV3-9A0A075B6K5 115 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 A0A1W2PPI3 338 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 TCRBV4S1A1TA0A5B7 111 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 ESDP10768 282 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 PTTG1IPP53801 180 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 BSPH1Q075Z2 132 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 ZNF841Q6ZN19 808 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 LINC00173Q6ZV60 143 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 Q71RC1 249 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-201ENST00000340437 PRNTQ86SH4 94 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 ZNF292O60281 2723 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 LINC00322Q6ZN03 302 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-201ENST00000340437 GRAMD2BQ96HH9 432 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 MRPL32Q9BYC8 188 aaKnown RBP11.6□□□□□ -0.55
CPSF7-201ENST00000340437 EPDR1Q9UM22 224 aa11.6□□□□□ -0.55
CPSF7-201ENST00000340437 MUC21A0A0G2JKD1 596 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 MUC21A0A140T8X8 626 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 P01737 135 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 HIST1H1EP10412 219 aaKnown RBP11.59□□□□□ -0.55
CPSF7-201ENST00000340437 VMA21Q3ZAQ7 101 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 LRRC10Q5BKY1 277 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 MUC21Q5SSG8 566 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 MYO9AB2RTY4 2548 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 FAM181BA6NEQ2 426 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 EXOC3-AS1Q8N2X6 119 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 KLHDC1Q8N7A1 406 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 SELENOKQ9Y6D0 94 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 DSCAML1Q8TD84 2053 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 VWC2LB2RUY7 222 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 CHEK1O14757 476 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 POU2AF1Q16633 256 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 CIARTQ8N365 385 aaPredicted RBP11.59□□□□□ -0.55
CPSF7-201ENST00000340437 FXYD5Q96DB9 178 aa11.59□□□□□ -0.55
CPSF7-201ENST00000340437 LOXL4Q96JB6 756 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms