RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 STPG3Q8N7X2 389 aa10.79□□□□□ -0.68
ERCC1-203ENST00000340192 OR51G1Q8NGK1 321 aa10.79□□□□□ -0.68
ERCC1-203ENST00000340192 OR4D5Q8NGN0 318 aa10.79□□□□□ -0.68
ERCC1-203ENST00000340192 KIR2DL5BQ8NHK3 375 aa10.79□□□□□ -0.68
ERCC1-203ENST00000340192 A6NHS1 94 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 PRSS46E5RG02 174 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 H3BP45 60 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 K7EQG2 157 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 UBE2CO00762 179 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 NKX2-1P43699 371 aaPredicted RBP10.78□□□□□ -0.68
ERCC1-203ENST00000340192 DEFB131AP59861 70 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 POLR2GP62487 172 aaKnown RBP eCLIP10.78□□□□□ -0.68
ERCC1-203ENST00000340192 DEFB135Q30KP9 77 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 DCANP1Q8TF63 244 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 MITD1Q8WV92 249 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 GLMPQ8WWB7 406 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 S100ZQ8WXG8 99 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 RNF125Q96EQ8 232 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 NUDT15Q9NV35 164 aa10.78□□□□□ -0.68
ERCC1-203ENST00000340192 TRAV6A0A075B6T7 132 aa10.77□□□□□ -0.69
ERCC1-203ENST00000340192 IGKV1OR2-108A0A075B7D4 117 aa10.77□□□□□ -0.69
ERCC1-203ENST00000340192 HELTA6NFD8 242 aa10.77□□□□□ -0.69
ERCC1-203ENST00000340192 SPRY2O43597 315 aa10.77□□□□□ -0.69
ERCC1-203ENST00000340192 SSSCA1O60232 199 aa10.77□□□□□ -0.69
ERCC1-203ENST00000340192 FABP1P07148 127 aa10.77□□□□□ -0.69
ERCC1-203ENST00000340192 EIF2B2P49770 351 aaKnown RBP10.77□□□□□ -0.69
ERCC1-203ENST00000340192 LEMD1Q68G75 181 aa10.77□□□□□ -0.69
ERCC1-203ENST00000340192 PBDC1Q9BVG4 233 aa10.77□□□□□ -0.69
ERCC1-203ENST00000340192 TP53TG1Q9Y2A0 90 aa10.77□□□□□ -0.69
ERCC1-203ENST00000340192 STRAPQ9Y3F4 350 aaKnown RBP10.77□□□□□ -0.69
ERCC1-203ENST00000340192 STARD9Q9P2P6 4700 aa10.77□□□□□ -0.69
ERCC1-203ENST00000340192 TENM2Q9NT68 2774 aa10.77□□□□□ -0.69
ERCC1-203ENST00000340192 BUB3O43684 328 aa10.76□□□□□ -0.69
ERCC1-203ENST00000340192 AP2S1P53680 142 aaPredicted RBP10.76□□□□□ -0.69
ERCC1-203ENST00000340192 IAH1Q2TAA2 248 aaPredicted RBP10.76□□□□□ -0.69
ERCC1-203ENST00000340192 SIGLEC15Q6ZMC9 328 aa10.76□□□□□ -0.69
ERCC1-203ENST00000340192 THAP8Q8NA92 274 aa10.76□□□□□ -0.69
ERCC1-203ENST00000340192 TRGV9Q99603 122 aa10.76□□□□□ -0.69
ERCC1-203ENST00000340192 CSTL1Q9H114 145 aa10.76□□□□□ -0.69
ERCC1-203ENST00000340192 PSENENQ9NZ42 101 aa10.76□□□□□ -0.69
ERCC1-203ENST00000340192 RYR3Q15413 4870 aa10.75□□□□□ -0.69
ERCC1-203ENST00000340192 SCGB1D2O95969 90 aa10.75□□□□□ -0.69
ERCC1-203ENST00000340192 ZNF688P0C7X2 276 aa10.75□□□□□ -0.69
ERCC1-203ENST00000340192 LYZP61626 148 aa10.75□□□□□ -0.69
ERCC1-203ENST00000340192 OR2F1Q13607 317 aa10.75□□□□□ -0.69
ERCC1-203ENST00000340192 OR8G2PQ6IF36 304 aa10.75□□□□□ -0.69
ERCC1-203ENST00000340192 ZBTB8BQ8NAP8 495 aaPredicted RBP10.75□□□□□ -0.69
ERCC1-203ENST00000340192 RNF183Q96D59 192 aa10.75□□□□□ -0.69
ERCC1-203ENST00000340192 SMIM8Q96KF7 97 aa10.75□□□□□ -0.69
ERCC1-203ENST00000340192 SEC22CQ9BRL7 303 aa10.75□□□□□ -0.69
ERCC1-203ENST00000340192 GSKIPQ9P0R6 139 aa10.75□□□□□ -0.69
ERCC1-203ENST00000340192 TBC1D24Q9ULP9 559 aa10.75□□□□□ -0.69
ERCC1-203ENST00000340192 FAM240BA0A1B0GVZ2 78 aa10.74□□□□□ -0.69
ERCC1-203ENST00000340192 SNRPGP15A8MWD9 76 aa10.74□□□□□ -0.69
ERCC1-203ENST00000340192 CCSO14618 274 aa10.74□□□□□ -0.69
ERCC1-203ENST00000340192 H2AFB2P0C5Z0 115 aa10.74□□□□□ -0.69
ERCC1-203ENST00000340192 NUP62P37198 522 aaPredicted RBP10.74□□□□□ -0.69
ERCC1-203ENST00000340192 PAX9P55771 341 aa10.74□□□□□ -0.69
ERCC1-203ENST00000340192 AKR1C1Q04828 323 aa10.74□□□□□ -0.69
ERCC1-203ENST00000340192 ACOT7LQ6ZUV0 252 aa10.74□□□□□ -0.69
ERCC1-203ENST00000340192 IL17DQ8TAD2 202 aa10.74□□□□□ -0.69
ERCC1-203ENST00000340192 PTTG2Q9NZH5 202 aa10.74□□□□□ -0.69
ERCC1-203ENST00000340192 PFDN2Q9UHV9 154 aa10.74□□□□□ -0.69
ERCC1-203ENST00000340192 ASAH1Q13510 395 aa10.73□□□□□ -0.69
ERCC1-203ENST00000340192 MZT2BQ6NZ67 158 aa10.73□□□□□ -0.69
ERCC1-203ENST00000340192 STHQ8IWL8 128 aa10.73□□□□□ -0.69
ERCC1-203ENST00000340192 ZNF431Q8TF32 576 aaPredicted RBP10.73□□□□□ -0.69
ERCC1-203ENST00000340192 WDR12Q9GZL7 423 aaKnown RBP10.73□□□□□ -0.69
ERCC1-203ENST00000340192 NRN1Q9NPD7 142 aa10.73□□□□□ -0.69
ERCC1-203ENST00000340192 RCL1Q9Y2P8 373 aaKnown RBP10.73□□□□□ -0.69
ERCC1-203ENST00000340192 AGRNO00468 2067 aa10.73□□□□□ -0.69
ERCC1-203ENST00000340192 DYNC2H1Q8NCM8 4307 aaKnown RBP10.72□□□□□ -0.69
ERCC1-203ENST00000340192 A0A0J9YWU9 116 aa10.72□□□□□ -0.69
ERCC1-203ENST00000340192 SMCO3A2RU48 225 aa10.72□□□□□ -0.69
ERCC1-203ENST00000340192 PMS2P5A8MQ11 134 aa10.72□□□□□ -0.69
ERCC1-203ENST00000340192 FAM25EA8MYX2 175 aa10.72□□□□□ -0.69
ERCC1-203ENST00000340192 CCNKO75909 580 aa10.72□□□□□ -0.69
ERCC1-203ENST00000340192 CA1P00915 261 aaPredicted RBP10.72□□□□□ -0.69
ERCC1-203ENST00000340192 MBPP02686 304 aaPredicted RBP10.72□□□□□ -0.69
ERCC1-203ENST00000340192 METTL15P1P0C7V9 234 aa10.72□□□□□ -0.69
ERCC1-203ENST00000340192 ZNF846Q147U1 533 aa10.72□□□□□ -0.69
ERCC1-203ENST00000340192 PSMG4Q5JS54 123 aa10.72□□□□□ -0.69
ERCC1-203ENST00000340192 RAB40CQ96S21 281 aa10.72□□□□□ -0.69
ERCC1-203ENST00000340192 LYSTQ99698 3801 aa10.72□□□□□ -0.69
ERCC1-203ENST00000340192 KNCNA6PVL3 124 aa10.71□□□□□ -0.69
ERCC1-203ENST00000340192 UPK1BO75841 260 aa10.71□□□□□ -0.69
ERCC1-203ENST00000340192 CFDP00746 253 aaPredicted RBP10.71□□□□□ -0.69
ERCC1-203ENST00000340192 GATA2P23769 480 aaPredicted RBP10.71□□□□□ -0.69
ERCC1-203ENST00000340192 TAS2R30P59541 319 aa10.71□□□□□ -0.69
ERCC1-203ENST00000340192 SNRPD3P62318 126 aaKnown RBP10.71□□□□□ -0.69
ERCC1-203ENST00000340192 C1orf194Q5T5A4 169 aa10.71□□□□□ -0.69
ERCC1-203ENST00000340192 TMEM14EPQ6UXP3 125 aa10.71□□□□□ -0.69
ERCC1-203ENST00000340192 TMEM182Q6ZP80 229 aaPredicted RBP10.71□□□□□ -0.69
ERCC1-203ENST00000340192 TMEM144Q7Z5S9 345 aa10.71□□□□□ -0.69
ERCC1-203ENST00000340192 TRPT1Q86TN4 253 aaKnown RBP10.71□□□□□ -0.69
ERCC1-203ENST00000340192 C12orf45Q8N5I9 185 aaPredicted RBP10.71□□□□□ -0.69
ERCC1-203ENST00000340192 GATAD1Q8WUU5 269 aa10.71□□□□□ -0.69
ERCC1-203ENST00000340192 PPP1R14BQ96C90 147 aa10.71□□□□□ -0.69
ERCC1-203ENST00000340192 C7orf66A4D0T2 115 aa10.7□□□□□ -0.7
ERCC1-203ENST00000340192 C5orf51A6NDU8 294 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms