RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 VMO1Q7Z5L0 202 aa10.2□□□□□ -0.78
FN1-202ENST00000336916 OSTCQ9NRP0 149 aa10.2□□□□□ -0.78
FN1-202ENST00000336916 MBD3L4A6NDZ8 208 aaPredicted RBP10.2□□□□□ -0.78
FN1-202ENST00000336916 MBD3L3A6NE82 208 aaPredicted RBP10.2□□□□□ -0.78
FN1-202ENST00000336916 MBD3L5A6NJ08 208 aaPredicted RBP10.2□□□□□ -0.78
FN1-202ENST00000336916 E9PQ18 207 aa10.2□□□□□ -0.78
FN1-202ENST00000336916 C10orf126Q8N4M7 172 aa10.2□□□□□ -0.78
FN1-202ENST00000336916 MBD3L2Q8NHZ7 208 aaPredicted RBP10.2□□□□□ -0.78
FN1-202ENST00000336916 EREGO14944 169 aa10.2□□□□□ -0.78
FN1-202ENST00000336916 CELA3BP08861 270 aa10.2□□□□□ -0.78
FN1-202ENST00000336916 FOXL2P58012 376 aa10.2□□□□□ -0.78
FN1-202ENST00000336916 ZNF672Q499Z4 452 aaPredicted RBP10.2□□□□□ -0.78
FN1-202ENST00000336916 C17orf98A8MV24 154 aa10.2□□□□□ -0.78
FN1-202ENST00000336916 C18orf12Q96KH6 178 aa10.2□□□□□ -0.78
FN1-202ENST00000336916 LRRK2Q5S007 2527 aa10.19□□□□□ -0.78
FN1-202ENST00000336916 ADARB2-AS1A8MUL3 147 aa10.19□□□□□ -0.78
FN1-202ENST00000336916 INSP01308 110 aa10.19□□□□□ -0.78
FN1-202ENST00000336916 PDE6HQ13956 83 aa10.19□□□□□ -0.78
FN1-202ENST00000336916 SLC25A2Q9BXI2 301 aa10.19□□□□□ -0.78
FN1-202ENST00000336916 A0A087WX48 190 aa10.19□□□□□ -0.78
FN1-202ENST00000336916 KLK2P20151 261 aa10.19□□□□□ -0.78
FN1-202ENST00000336916 DPH3P1Q9H4G8 78 aa10.19□□□□□ -0.78
FN1-202ENST00000336916 C3orf56Q8N813 242 aa10.19□□□□□ -0.78
FN1-202ENST00000336916 NAT1P18440 290 aa10.19□□□□□ -0.78
FN1-202ENST00000336916 A0A1W2PRX2 142 aa10.18□□□□□ -0.78
FN1-202ENST00000336916 C1QL1O75973 258 aa10.18□□□□□ -0.78
FN1-202ENST00000336916 MCRIP2Q9BUT9 160 aaKnown RBP10.18□□□□□ -0.78
FN1-202ENST00000336916 RAI1Q7Z5J4 1906 aaPredicted RBP10.18□□□□□ -0.78
FN1-202ENST00000336916 TMEM50AO95807 157 aa10.18□□□□□ -0.78
FN1-202ENST00000336916 C15orf32Q32M92 178 aa10.18□□□□□ -0.78
FN1-202ENST00000336916 EPDR1Q9UM22 224 aa10.18□□□□□ -0.78
FN1-202ENST00000336916 DPM2O94777 84 aa10.18□□□□□ -0.78
FN1-202ENST00000336916 APOHP02749 345 aaPredicted RBP10.18□□□□□ -0.78
FN1-202ENST00000336916 C17orf82Q86X59 251 aaPredicted RBP10.18□□□□□ -0.78
FN1-202ENST00000336916 LCN12Q6JVE5 192 aa10.18□□□□□ -0.78
FN1-202ENST00000336916 C9orf139Q6ZV77 190 aa10.18□□□□□ -0.78
FN1-202ENST00000336916 IGHV1-46P01743 117 aa10.18□□□□□ -0.78
FN1-202ENST00000336916 IGHV1-8P0DP01 117 aa10.18□□□□□ -0.78
FN1-202ENST00000336916 FHITP49789 147 aa10.18□□□□□ -0.78
FN1-202ENST00000336916 COQ2Q96H96 371 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 ZNF250P15622 560 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 EXPH5Q8NEV8 1989 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 ITGB1BP1O14713 200 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 TRBV6-6A0A0A6YYG2 114 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 A0A1B0GTI1 187 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 MPTX1A8MV57 137 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 PSCAO43653 123 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 EGR1P18146 543 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 RPL36AP83881 106 aaKnown RBP10.17□□□□□ -0.78
FN1-202ENST00000336916 RPL36ALQ969Q0 106 aaKnown RBP10.17□□□□□ -0.78
FN1-202ENST00000336916 CTSBP07858 339 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 SRSF2Q01130 221 aaKnown RBP10.17□□□□□ -0.78
FN1-202ENST00000336916 RPUSD1Q9UJJ7 312 aaKnown RBP10.17□□□□□ -0.78
FN1-202ENST00000336916 TMEM238C9JI98 176 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 SAP30O75446 220 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 HBDP02042 147 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 FAM89BQ8N5H3 189 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 WDR87Q6ZQQ6 2873 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 H0YL77 283 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 CDKN1AP38936 164 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 NR2C2APQ86WQ0 139 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 LAMTOR2Q9Y2Q5 125 aa10.17□□□□□ -0.78
FN1-202ENST00000336916 ZNF585BQ52M93 769 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 Q6ZS92 163 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 GGNQ86UU5 652 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 TIMM23O14925 209 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 IGHV3-48P01763 117 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 HTN3P15516 51 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 CBLN1P23435 193 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 EMP1P54849 157 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 LY6DQ14210 128 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 LAGE3Q14657 143 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 PTPRSQ13332 1948 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 APOC4P55056 127 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 TPTE2P1Q5T6R2 138 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 SPATA31B1PQ5VZV4 182 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 RTBDNQ9BSG5 229 aaPredicted RBP10.16□□□□□ -0.78
FN1-202ENST00000336916 C5orf64Q2M2E5 130 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 AKIRIN1Q9H9L7 192 aaPredicted RBP10.16□□□□□ -0.78
FN1-202ENST00000336916 SLC25A15Q9Y619 301 aa10.16□□□□□ -0.78
FN1-202ENST00000336916 ZNF324BQ6AW86 544 aaPredicted RBP10.15□□□□□ -0.78
FN1-202ENST00000336916 GGTLC3B5MD39 225 aa10.15□□□□□ -0.78
FN1-202ENST00000336916 PRR32B1ATL7 298 aa10.15□□□□□ -0.78
FN1-202ENST00000336916 S100A7L2Q5SY68 101 aa10.15□□□□□ -0.78
FN1-202ENST00000336916 OR5A1Q8NGJ0 315 aa10.15□□□□□ -0.78
FN1-202ENST00000336916 TMEM242Q9NWH2 141 aa10.15□□□□□ -0.78
FN1-202ENST00000336916 CARHSP1Q9Y2V2 147 aaKnown RBP10.15□□□□□ -0.78
FN1-202ENST00000336916 TRAV8-6A0A0B4J262 113 aa10.15□□□□□ -0.78
FN1-202ENST00000336916 K7ENP7 123 aa10.15□□□□□ -0.78
FN1-202ENST00000336916 C1QL2Q7Z5L3 287 aa10.15□□□□□ -0.78
FN1-202ENST00000336916 A0A0G2JNJ9 132 aa10.15□□□□□ -0.78
FN1-202ENST00000336916 RAMP1O60894 148 aa10.15□□□□□ -0.78
FN1-202ENST00000336916 DDTP30046 118 aa10.15□□□□□ -0.78
FN1-202ENST00000336916 Q9UFV3 132 aa10.15□□□□□ -0.78
FN1-202ENST00000336916 PIEZO1Q92508 2521 aa10.15□□□□□ -0.79
FN1-202ENST00000336916 SCO2A0A1W2PP80 73 aa10.15□□□□□ -0.79
FN1-202ENST00000336916 NDUFB8O95169 186 aa10.15□□□□□ -0.79
FN1-202ENST00000336916 ZNF138P52744 262 aa10.15□□□□□ -0.79
FN1-202ENST00000336916 FAM219BQ5XKK7 198 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms