RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 Q8WTZ3 238 aa12.16□□□□□ -0.46
LRRC28-202ENST00000331450 ST6GAL2Q96JF0 529 aa12.16□□□□□ -0.46
LRRC28-202ENST00000331450 GINS3Q9BRX5 216 aa12.16□□□□□ -0.46
LRRC28-202ENST00000331450 MRPL27Q9P0M9 148 aaKnown RBP12.16□□□□□ -0.46
LRRC28-202ENST00000331450 UBE2L5PA0A1B0GUS4 154 aa12.15□□□□□ -0.46
LRRC28-202ENST00000331450 SMLR1H3BR10 107 aa12.15□□□□□ -0.46
LRRC28-202ENST00000331450 ZNF207O43670 478 aaKnown RBP12.15□□□□□ -0.46
LRRC28-202ENST00000331450 IL4P05112 153 aa12.15□□□□□ -0.46
LRRC28-202ENST00000331450 EGFEM1PQ0D2K5 195 aa12.15□□□□□ -0.46
LRRC28-202ENST00000331450 USF2Q15853 346 aaPredicted RBP12.15□□□□□ -0.46
LRRC28-202ENST00000331450 BEAN1Q3B7T3 259 aa12.15□□□□□ -0.46
LRRC28-202ENST00000331450 TMEM182Q6ZP80 229 aaPredicted RBP12.15□□□□□ -0.46
LRRC28-202ENST00000331450 CYP2G1PQ6ZSU1 146 aa12.15□□□□□ -0.46
LRRC28-202ENST00000331450 MGST2Q99735 147 aa12.15□□□□□ -0.46
LRRC28-202ENST00000331450 TNFSF18Q9UNG2 199 aa12.15□□□□□ -0.46
LRRC28-202ENST00000331450 FXYD6-FXYD2A0A087WZ82 144 aa12.14□□□□□ -0.47
LRRC28-202ENST00000331450 IGHV7-4-1A0A0J9YVY3 117 aa12.14□□□□□ -0.47
LRRC28-202ENST00000331450 RNF222A6NCQ9 220 aa12.14□□□□□ -0.47
LRRC28-202ENST00000331450 OR2F1Q13607 317 aa12.14□□□□□ -0.47
LRRC28-202ENST00000331450 RNF125Q96EQ8 232 aa12.14□□□□□ -0.47
LRRC28-202ENST00000331450 MLXQ9UH92 298 aa12.14□□□□□ -0.47
LRRC28-202ENST00000331450 SMPXQ9UHP9 88 aa12.14□□□□□ -0.47
LRRC28-202ENST00000331450 CMYA5Q8N3K9 4069 aa12.14□□□□□ -0.47
LRRC28-202ENST00000331450 AGPAT2O15120 278 aa12.13□□□□□ -0.47
LRRC28-202ENST00000331450 CRYBB3P26998 211 aa12.13□□□□□ -0.47
LRRC28-202ENST00000331450 SELENOTP62341 195 aa12.13□□□□□ -0.47
LRRC28-202ENST00000331450 CLINT1Q14677 625 aa12.13□□□□□ -0.47
LRRC28-202ENST00000331450 ZNF546Q86UE3 836 aa12.13□□□□□ -0.47
LRRC28-202ENST00000331450 ATP5SQ99766 215 aa12.13□□□□□ -0.47
LRRC28-202ENST00000331450 GGTLC1Q9BX51 225 aa12.13□□□□□ -0.47
LRRC28-202ENST00000331450 TECRQ9NZ01 308 aaKnown RBP12.13□□□□□ -0.47
LRRC28-202ENST00000331450 SLC45A2Q9UMX9 530 aa12.13□□□□□ -0.47
LRRC28-202ENST00000331450 U3KQE9 123 aa12.13□□□□□ -0.47
LRRC28-202ENST00000331450 MGAM2Q2M2H8 2515 aa12.12□□□□□ -0.47
LRRC28-202ENST00000331450 MPDU1O75352 247 aa12.12□□□□□ -0.47
LRRC28-202ENST00000331450 CFDP00746 253 aaPredicted RBP12.12□□□□□ -0.47
LRRC28-202ENST00000331450 APOHP02749 345 aaPredicted RBP12.12□□□□□ -0.47
LRRC28-202ENST00000331450 GATA2P23769 480 aaPredicted RBP12.12□□□□□ -0.47
LRRC28-202ENST00000331450 DEFB114Q30KQ6 69 aa12.12□□□□□ -0.47
LRRC28-202ENST00000331450 BTNL8Q6UX41 500 aa12.12□□□□□ -0.47
LRRC28-202ENST00000331450 TCTE3Q8IZS6 198 aa12.12□□□□□ -0.47
LRRC28-202ENST00000331450 BPIFCQ8NFQ6 507 aa12.12□□□□□ -0.47
LRRC28-202ENST00000331450 OR2K2Q8NGT1 345 aa12.12□□□□□ -0.47
LRRC28-202ENST00000331450 METTL26Q96S19 204 aa12.12□□□□□ -0.47
LRRC28-202ENST00000331450 VSIRQ9H7M9 311 aa12.12□□□□□ -0.47
LRRC28-202ENST00000331450 FBXL17Q9UF56 701 aa12.12□□□□□ -0.47
LRRC28-202ENST00000331450 CHEK1O14757 476 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 DFFBO76075 338 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 HNRNPCP07910 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
LRRC28-202ENST00000331450 FGF7P21781 194 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 NPPCP23582 126 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 CAMLGP49069 296 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 PLP1P60201 277 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 KRTAP10-11P60412 298 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 LYZP61626 148 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 PRR20EP86478 221 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 PRR20CP86479 221 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 PRR20DP86480 221 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 PRR20BP86481 221 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 PRR20AP86496 221 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 OPCMLQ14982 345 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 OR11H4Q8NGC9 324 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 DYNLRB2Q8TF09 96 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 RHPN1-AS1Q9BWJ2 59 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 SMIM3Q9BZL3 60 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 WDR61Q9GZS3 305 aaKnown RBP12.11□□□□□ -0.47
LRRC28-202ENST00000331450 WFDC1Q9HC57 220 aa12.11□□□□□ -0.47
LRRC28-202ENST00000331450 IGHV3-49A0A0A0MS15 119 aa12.1□□□□□ -0.47
LRRC28-202ENST00000331450 IZUMO1RA6ND01 250 aa12.1□□□□□ -0.47
LRRC28-202ENST00000331450 ARPC5O15511 151 aa12.1□□□□□ -0.47
LRRC28-202ENST00000331450 LINC00869P0C866 280 aa12.1□□□□□ -0.47
LRRC28-202ENST00000331450 NUP62P37198 522 aaPredicted RBP12.1□□□□□ -0.47
LRRC28-202ENST00000331450 EIF2B2P49770 351 aaKnown RBP12.1□□□□□ -0.47
LRRC28-202ENST00000331450 CD300EQ496F6 205 aaPredicted RBP12.1□□□□□ -0.47
LRRC28-202ENST00000331450 TMEM61Q8N0U2 210 aa12.1□□□□□ -0.47
LRRC28-202ENST00000331450 STPG3Q8N7X2 389 aa12.1□□□□□ -0.47
LRRC28-202ENST00000331450 INO80EQ8NBZ0 244 aaPredicted RBP12.1□□□□□ -0.47
LRRC28-202ENST00000331450 ST8SIA2Q92186 375 aa12.1□□□□□ -0.47
LRRC28-202ENST00000331450 PBDC1Q9BVG4 233 aa12.1□□□□□ -0.47
LRRC28-202ENST00000331450 NPCDR1Q9BY65 106 aa12.1□□□□□ -0.47
LRRC28-202ENST00000331450 PARD6GQ9BYG4 376 aaPredicted RBP12.1□□□□□ -0.47
LRRC28-202ENST00000331450 RABAC1Q9UI14 185 aa12.1□□□□□ -0.47
LRRC28-202ENST00000331450 IGHV3OR16-13A0A075B7E8 117 aa12.09□□□□□ -0.47
LRRC28-202ENST00000331450 IGHV3-74A0A0B4J1X5 117 aa12.09□□□□□ -0.47
LRRC28-202ENST00000331450 HMSDA8MTL9 139 aa12.09□□□□□ -0.47
LRRC28-202ENST00000331450 RPL29P47914 159 aaKnown RBP12.09□□□□□ -0.47
LRRC28-202ENST00000331450 RAB31Q13636 194 aa12.09□□□□□ -0.47
LRRC28-202ENST00000331450 LCN12Q6JVE5 192 aa12.09□□□□□ -0.47
LRRC28-202ENST00000331450 AKAP14Q86UN6 197 aa12.09□□□□□ -0.47
LRRC28-202ENST00000331450 SELENOKQ9Y6D0 94 aa12.09□□□□□ -0.47
LRRC28-202ENST00000331450 NOTCH3Q9UM47 2321 aa12.08□□□□□ -0.48
LRRC28-202ENST00000331450 TRAV25A0A0B4J276 109 aa12.08□□□□□ -0.48
LRRC28-202ENST00000331450 BUB3O43684 328 aa12.08□□□□□ -0.48
LRRC28-202ENST00000331450 BMI1P35226 326 aa12.08□□□□□ -0.48
LRRC28-202ENST00000331450 ZNF345Q14585 488 aa12.08□□□□□ -0.48
LRRC28-202ENST00000331450 PXDC1Q5TGL8 231 aa12.08□□□□□ -0.48
LRRC28-202ENST00000331450 MIC13Q5XKP0 118 aa12.08□□□□□ -0.48
LRRC28-202ENST00000331450 FAM90A2PQ658T7 463 aa12.08□□□□□ -0.48
LRRC28-202ENST00000331450 RNF2Q99496 336 aa12.08□□□□□ -0.48
LRRC28-202ENST00000331450 TMEM231Q9H6L2 316 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 257.3 ms