RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 OR10J1P30954 320 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 TMEM170AQ8WVE7 144 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 SRSF12Q8WXF0 261 aaKnown RBP12.76□□□□□ -0.37
PDGFB-201ENST00000331163 BTF3L4Q96K17 158 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 PF4V1P10720 104 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 RELBQ01201 579 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 CYP2G1PQ6ZSU1 146 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 SGMS2Q8NHU3 365 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 OSR1Q8TAX0 266 aaPredicted RBP12.76□□□□□ -0.37
PDGFB-201ENST00000331163 CMTM2Q8TAZ6 248 aa12.76□□□□□ -0.37
PDGFB-201ENST00000331163 UPK2O00526 184 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 OR10J4P0C629 311 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 CGB3P0DN86 165 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 CGB7P0DN87 165 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 S100A7P31151 101 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 LYZP61626 148 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 ACOT6Q3I5F7 207 aaPredicted RBP12.75□□□□□ -0.37
PDGFB-201ENST00000331163 NDUFB4O95168 129 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 SLC35B1P78383 322 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 RNF151Q2KHN1 245 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 DEFB113Q30KQ7 82 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 ETFRF1Q6IPR1 90 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 MMD2Q8IY49 270 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 ZNF439Q8NDP4 499 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 OR1B1Q8NGR6 318 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 BLNKQ8WV28 456 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 IGHV3-66A0A0C4DH42 116 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 A0A1W2PN81 502 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 C11orf94C9JXX5 98 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 CBLN1P23435 193 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 LDLRAD2Q5SZI1 272 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 BCL6BQ8N143 479 aaPredicted RBP12.75□□□□□ -0.37
PDGFB-201ENST00000331163 CORO2AQ92828 525 aa12.75□□□□□ -0.37
PDGFB-201ENST00000331163 C15orf61A6NNL5 157 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 G3V318 75 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 SRSF2Q01130 221 aaKnown RBP12.74□□□□□ -0.37
PDGFB-201ENST00000331163 PDPNQ86YL7 162 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 C11orf42Q8N5U0 333 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 UHRF2Q96PU4 802 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 VAMP8Q9BV40 100 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 C11orf1Q9H5F2 150 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 PSG5Q15238 335 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 ERASQ7Z444 233 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 HAPLN4Q86UW8 402 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 RNASEH2CQ8TDP1 164 aaKnown RBP12.74□□□□□ -0.37
PDGFB-201ENST00000331163 UBR5O95071 2799 aaPredicted RBP12.74□□□□□ -0.37
PDGFB-201ENST00000331163 DUXBA0A1W2PPF3 345 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 NBR2O15453 112 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 VENTXO95231 258 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 GBGT1Q8N5D6 347 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 TMEM242Q9NWH2 141 aa12.74□□□□□ -0.37
PDGFB-201ENST00000331163 IGFBP2P18065 325 aa12.73□□□□□ -0.37
PDGFB-201ENST00000331163 TMEM95Q3KNT9 176 aa12.73□□□□□ -0.37
PDGFB-201ENST00000331163 Q6ZVH6 145 aa12.73□□□□□ -0.37
PDGFB-201ENST00000331163 TMEM147Q9BVK8 224 aa12.73□□□□□ -0.37
PDGFB-201ENST00000331163 WDR61Q9GZS3 305 aaKnown RBP12.73□□□□□ -0.37
PDGFB-201ENST00000331163 ATP5G3P48201 142 aa12.73□□□□□ -0.37
PDGFB-201ENST00000331163 LEMD1Q68G75 181 aa12.73□□□□□ -0.37
PDGFB-201ENST00000331163 ATOH7Q8N100 152 aa12.73□□□□□ -0.37
PDGFB-201ENST00000331163 CIARTQ8N365 385 aaPredicted RBP12.73□□□□□ -0.37
PDGFB-201ENST00000331163 KIAA1644Q3SXP7 199 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 SGK494Q96LW2 274 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 SMR3AQ99954 134 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 SLC25A33Q9BSK2 321 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 FBN2P35556 2912 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 HOXB4P17483 251 aaPredicted RBP12.72□□□□□ -0.37
PDGFB-201ENST00000331163 PMCHP20382 165 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 CX3CL1P78423 397 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 ZNF90Q03938 601 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 C1orf194Q5T5A4 169 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.72□□□□□ -0.37
PDGFB-201ENST00000331163 TXN2Q99757 166 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 WNT10AQ9GZT5 417 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 CENPVL3A0A0U1RRI6 287 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 LGALS7P47929 136 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 CR1LQ2VPA4 569 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 P2RX4Q99571 388 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 SIGLEC9Q9Y336 463 aa12.72□□□□□ -0.37
PDGFB-201ENST00000331163 C17orf112F2Z3M2 114 aa12.71□□□□□ -0.37
PDGFB-201ENST00000331163 SLC17A3O00476 420 aa12.71□□□□□ -0.37
PDGFB-201ENST00000331163 GNG7O60262 68 aa12.71□□□□□ -0.37
PDGFB-201ENST00000331163 ADMP35318 185 aa12.71□□□□□ -0.37
PDGFB-201ENST00000331163 LRRC75BQ2VPJ9 315 aa12.71□□□□□ -0.37
PDGFB-201ENST00000331163 C1RLQ9NZP8 487 aa12.71□□□□□ -0.37
PDGFB-201ENST00000331163 HSPB7Q9UBY9 170 aa12.71□□□□□ -0.37
PDGFB-201ENST00000331163 DNAJC4Q9NNZ3 241 aa12.71□□□□□ -0.37
PDGFB-201ENST00000331163 MAST4O15021 2626 aa12.71□□□□□ -0.38
PDGFB-201ENST00000331163 TMEM249Q2WGJ8 235 aa12.71□□□□□ -0.38
PDGFB-201ENST00000331163 MBD3L1Q8WWY6 194 aa12.71□□□□□ -0.38
PDGFB-201ENST00000331163 A0A1W2PPI3 338 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 NTF3P20783 257 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 ACTL10Q5JWF8 245 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 DNLZQ5SXM8 178 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 TRAV1-1A0A0B4J248 108 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 COX7A2P2O60397 106 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 AVPP01185 164 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 ZNF833PQ6ZTB9 187 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 ZNF114Q8NC26 417 aa12.7□□□□□ -0.38
PDGFB-201ENST00000331163 OR5AN1Q8NGI8 311 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms